RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 FXYD6Q9H0Q3 95 aa14.03□□□□□ -0.16
CTNS-203ENST00000399306 SERTAD4Q9NUC0 356 aa14.03□□□□□ -0.16
CTNS-203ENST00000399306 SLC2A8Q9NY64 477 aa14.03□□□□□ -0.16
CTNS-203ENST00000399306 PTTG2Q9NZH5 202 aa14.03□□□□□ -0.16
CTNS-203ENST00000399306 ZNF580Q9UK33 172 aa14.03□□□□□ -0.16
CTNS-203ENST00000399306 DISC1C4P0D8 188 aa14.02□□□□□ -0.17
CTNS-203ENST00000399306 GPR31O00270 319 aa14.02□□□□□ -0.17
CTNS-203ENST00000399306 RRHO14718 337 aa14.02□□□□□ -0.17
CTNS-203ENST00000399306 HLA-DRB1P01911 266 aa14.02□□□□□ -0.17
CTNS-203ENST00000399306 IGKV1-16P04430 117 aa14.02□□□□□ -0.17
CTNS-203ENST00000399306 S100GP29377 79 aa14.02□□□□□ -0.17
CTNS-203ENST00000399306 F2RL1P55085 397 aa14.02□□□□□ -0.17
CTNS-203ENST00000399306 ZNF818PQ6ZRF7 136 aa14.02□□□□□ -0.17
CTNS-203ENST00000399306 SLC38A6Q8IZM9 456 aa14.02□□□□□ -0.17
CTNS-203ENST00000399306 CD300LFQ8TDQ1 290 aa14.02□□□□□ -0.17
CTNS-203ENST00000399306 RSRP1Q9BUV0 290 aa14.02□□□□□ -0.17
CTNS-203ENST00000399306 FAM212BQ9NTI7 297 aaPredicted RBP14.02□□□□□ -0.17
CTNS-203ENST00000399306 ZNF735P0CB33 412 aa14.01□□□□□ -0.17
CTNS-203ENST00000399306 FAUP35544 74 aaKnown RBP14.01□□□□□ -0.17
CTNS-203ENST00000399306 VDAC2P45880 294 aaPredicted RBP14.01□□□□□ -0.17
CTNS-203ENST00000399306 LINC00205P59089 165 aa14.01□□□□□ -0.17
CTNS-203ENST00000399306 RPS16P62249 146 aaKnown RBP14.01□□□□□ -0.17
CTNS-203ENST00000399306 SURF2Q15527 256 aaPredicted RBP14.01□□□□□ -0.17
CTNS-203ENST00000399306 OR4S2Q8NH73 311 aa14.01□□□□□ -0.17
CTNS-203ENST00000399306 WFDC12Q8WWY7 111 aa14.01□□□□□ -0.17
CTNS-203ENST00000399306 PRRT1Q99946 306 aa14.01□□□□□ -0.17
CTNS-203ENST00000399306 AIFM2Q9BRQ8 373 aa14.01□□□□□ -0.17
CTNS-203ENST00000399306 RND3P61587 244 aa14□□□□□ -0.17
CTNS-203ENST00000399306 RPL30P62888 115 aaKnown RBP14□□□□□ -0.17
CTNS-203ENST00000399306 PSG5Q15238 335 aa14□□□□□ -0.17
CTNS-203ENST00000399306 SHISA2Q6UWI4 295 aa14□□□□□ -0.17
CTNS-203ENST00000399306 C3orf56Q8N813 242 aa14□□□□□ -0.17
CTNS-203ENST00000399306 OR4C16Q8NGL9 310 aa14□□□□□ -0.17
CTNS-203ENST00000399306 ZFAND1Q8TCF1 268 aa14□□□□□ -0.17
CTNS-203ENST00000399306 TCTEX1D2Q8WW35 142 aa14□□□□□ -0.17
CTNS-203ENST00000399306 TAF15Q92804 592 aaKnown RBP eCLIP14□□□□□ -0.17
CTNS-203ENST00000399306 RITA1Q96K30 269 aa14□□□□□ -0.17
CTNS-203ENST00000399306 DNHD1Q96M86 4753 aa13.99□□□□□ -0.17
CTNS-203ENST00000399306 SHOXO15266 292 aa13.99□□□□□ -0.17
CTNS-203ENST00000399306 KLF9Q13886 244 aaPredicted RBP13.99□□□□□ -0.17
CTNS-203ENST00000399306 ARSJQ5FYB0 599 aaPredicted RBP13.99□□□□□ -0.17
CTNS-203ENST00000399306 LIN54Q6MZP7 749 aa13.99□□□□□ -0.17
CTNS-203ENST00000399306 Q6ZS46 218 aa13.99□□□□□ -0.17
CTNS-203ENST00000399306 SLC35E3Q7Z769 313 aa13.99□□□□□ -0.17
CTNS-203ENST00000399306 FOXRED2Q8IWF2 684 aa13.99□□□□□ -0.17
CTNS-203ENST00000399306 CADM3Q8N126 398 aa13.99□□□□□ -0.17
CTNS-203ENST00000399306 TOMM5Q8N4H5 51 aa13.99□□□□□ -0.17
CTNS-203ENST00000399306 TEX45Q8NA69 505 aa13.99□□□□□ -0.17
CTNS-203ENST00000399306 POC5Q8NA72 575 aa13.99□□□□□ -0.17
CTNS-203ENST00000399306 OR4D10Q8NGI6 311 aa13.99□□□□□ -0.17
CTNS-203ENST00000399306 WIPF2Q8TF74 440 aaPredicted RBP13.99□□□□□ -0.17
CTNS-203ENST00000399306 S100ZQ8WXG8 99 aa13.99□□□□□ -0.17
CTNS-203ENST00000399306 HARBI1Q96MB7 349 aa13.99□□□□□ -0.17
CTNS-203ENST00000399306 SCP2D1Q9UJQ7 156 aa13.99□□□□□ -0.17
CTNS-203ENST00000399306 AP4M1O00189 453 aa13.98□□□□□ -0.17
CTNS-203ENST00000399306 FCGR3BO75015 233 aa13.98□□□□□ -0.17
CTNS-203ENST00000399306 PGLYRP1O75594 196 aaPredicted RBP13.98□□□□□ -0.17
CTNS-203ENST00000399306 CRYZL1O95825 349 aa13.98□□□□□ -0.17
CTNS-203ENST00000399306 IGLV2-23P01705 113 aa13.98□□□□□ -0.17
CTNS-203ENST00000399306 IGF1P05019 195 aa13.98□□□□□ -0.17
CTNS-203ENST00000399306 CNTFRP26992 372 aa13.98□□□□□ -0.17
CTNS-203ENST00000399306 UBE2KP61086 200 aa13.98□□□□□ -0.17
CTNS-203ENST00000399306 CHPT1Q8WUD6 406 aa13.98□□□□□ -0.17
CTNS-203ENST00000399306 GON7Q9BXV9 100 aa13.98□□□□□ -0.17
CTNS-203ENST00000399306 AKIP1Q9NQ31 210 aa13.98□□□□□ -0.17
CTNS-203ENST00000399306 TNCP24821 2201 aa13.97□□□□□ -0.17
CTNS-203ENST00000399306 PEX14O75381 377 aa13.97□□□□□ -0.17
CTNS-203ENST00000399306 HRASP01112 189 aa13.97□□□□□ -0.17
CTNS-203ENST00000399306 CRYGBP07316 175 aa13.97□□□□□ -0.17
CTNS-203ENST00000399306 F2RP25116 425 aa13.97□□□□□ -0.17
CTNS-203ENST00000399306 CRIP2P52943 208 aaPredicted RBP13.97□□□□□ -0.17
CTNS-203ENST00000399306 BRWD1-AS2P59051 145 aa13.97□□□□□ -0.17
CTNS-203ENST00000399306 POU2AF1Q16633 256 aa13.97□□□□□ -0.17
CTNS-203ENST00000399306 VMA21Q3ZAQ7 101 aa13.97□□□□□ -0.17
CTNS-203ENST00000399306 ZNF562Q6V9R5 426 aa13.97□□□□□ -0.17
CTNS-203ENST00000399306 SPAG16Q8N0X2 631 aa13.97□□□□□ -0.17
CTNS-203ENST00000399306 KLHDC1Q8N7A1 406 aa13.97□□□□□ -0.17
CTNS-203ENST00000399306 VSTM2AQ8TAG5 236 aa13.97□□□□□ -0.17
CTNS-203ENST00000399306 SCGB3A2Q96PL1 93 aa13.97□□□□□ -0.17
CTNS-203ENST00000399306 CITED1Q99966 193 aa13.97□□□□□ -0.17
CTNS-203ENST00000399306 PLEKHA2Q9HB19 425 aa13.97□□□□□ -0.17
CTNS-203ENST00000399306 METTL1Q9UBP6 276 aaKnown RBP13.97□□□□□ -0.17
CTNS-203ENST00000399306 SIGLEC9Q9Y336 463 aa13.97□□□□□ -0.17
CTNS-203ENST00000399306 PLXNB1O43157 2135 aa13.97□□□□□ -0.17
CTNS-203ENST00000399306 TNFSF12O43508 249 aa13.96□□□□□ -0.17
CTNS-203ENST00000399306 CREBL2O60519 120 aaPredicted RBP13.96□□□□□ -0.17
CTNS-203ENST00000399306 B3GALNT1O75752 331 aa13.96□□□□□ -0.17
CTNS-203ENST00000399306 HPRT1P00492 218 aa13.96□□□□□ -0.17
CTNS-203ENST00000399306 CTSDP07339 412 aaPredicted RBP13.96□□□□□ -0.17
CTNS-203ENST00000399306 FGF2P09038 288 aa13.96□□□□□ -0.17
CTNS-203ENST00000399306 PGAM2P15259 253 aa13.96□□□□□ -0.17
CTNS-203ENST00000399306 TAS2R31P59538 309 aa13.96□□□□□ -0.17
CTNS-203ENST00000399306 PLGLAQ15195 96 aa13.96□□□□□ -0.17
CTNS-203ENST00000399306 SCGB2B2Q4G0G5 96 aa13.96□□□□□ -0.17
CTNS-203ENST00000399306 C9orf152Q5JTZ5 239 aa13.96□□□□□ -0.17
CTNS-203ENST00000399306 PPP1R27Q86WC6 154 aa13.96□□□□□ -0.17
CTNS-203ENST00000399306 SDHCQ99643 169 aaPredicted RBP13.96□□□□□ -0.17
CTNS-203ENST00000399306 FBXL15Q9H469 300 aa13.96□□□□□ -0.17
CTNS-203ENST00000399306 SLC2A9Q9NRM0 540 aa13.96□□□□□ -0.17
CTNS-203ENST00000399306 COMMD9Q9P000 198 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms