RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 IGHV3-43DP0DP04 118 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 SRP14P37108 136 aaKnown RBP8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 SSR4P51571 173 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 TPPP2P59282 170 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 CCL7P80098 99 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 RNF151Q2KHN1 245 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 RPS19BP1Q86WX3 136 aaKnown RBP8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 CXorf67Q86X51 503 aaPredicted RBP8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 FAM58AQ8N1B3 248 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 TPRX1Q8N7U7 411 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 CPT1CQ8TCG5 803 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 MIEN1Q9BRT3 115 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 PXMP4Q9Y6I8 212 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 ICE1Q9Y2F5 2266 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 KIR2DL5BA0A0G2JN68 375 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 KIR2DL5BA0A0G2JPC4 375 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 SCO2A0A1W2PP80 73 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 SH2D1BO14796 132 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 MRPL33O75394 65 aaKnown RBP8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 NTF3P20783 257 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 RAB7AP51149 207 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 SOX8P57073 446 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 RAC3P60763 192 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 PCBD1P61457 104 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 MSMO1Q15800 293 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 KIR2DL5AQ8N109 375 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 CADM4Q8NFZ8 388 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 OR5AU1Q8NGC0 362 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 SFRP2Q96HF1 295 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 AGMATQ9BSE5 352 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 NPCDR1Q9BY65 106 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 OR2D2Q9H210 308 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 RIMS4Q9H426 269 aaPredicted RBP8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 RNF114Q9Y508 228 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 CHRNB4P30926 498 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 RPL15P61313 204 aaKnown RBP8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 TMEM183BQ1AE95 376 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 HLA-DRB5Q30154 266 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 ETFRF1Q6IPR1 90 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 Q6ZSR3 168 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 FOXL2NBQ6ZUU3 175 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 KMT5CQ86Y97 462 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 SSMEM1Q8WWF3 244 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 PROK2Q9HC23 129 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 TRBV20OR9-2A0A075B6H5 130 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 A0A1W2PQM1 296 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 ODAMA1E959 279 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 H3BS24 57 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 S1PR2O95136 353 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 IGLV2-14P01704 120 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 RPL30P62888 115 aaKnown RBP8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 ODF1Q14990 250 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 TMEM147Q9BVK8 224 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 LIN7CQ9NUP9 197 aaKnown RBP8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 ASPMQ8IZT6 3477 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 IGLV3-12A0A075B6K2 115 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 ZNF503-AS2A6NEH8 195 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 SNURFLB1AK76 121 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 CBR3O75828 277 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 IGHEP01854 428 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 GRPP07492 148 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 GDF1P27539 372 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 MRPS11P82912 194 aaKnown RBP8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 CEACAM21Q3KPI0 293 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 FAM19A2Q8N3H0 131 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 SIGLECL1Q8N7X8 197 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 OCC1Q8TAD7 63 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 ELOVL5Q9NYP7 299 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 RP1L1Q8IWN7 2480 aaPredicted RBP8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 M0QZK8 103 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 OTX2P32243 289 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 AMTP48728 403 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 HINT1P49773 126 aaPredicted RBP8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 PTTG1IPP53801 180 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 TPTE2P1Q5T6R2 138 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 Q6ZN92 141 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 OR52L2PQ8NGH6 319 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 OR10G8Q8NGN5 311 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 OR1L6Q8NGR2 347 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 TP53TG3Q9ULZ0 132 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 ZNF716A6NP11 495 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 ANKRD30BLA7E2S9 258 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 C17orf98A8MV24 154 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 DIRC3C9JPN6 131 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 TNFSF13O75888 250 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 P04436 131 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 ARL14EPLP0DKL9 152 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 SUMO1P63165 101 aaKnown RBP8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 PCOLCEQ15113 449 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 KRTCAP3Q53RY4 240 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 SYT13Q7L8C5 426 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 RNF138Q8WVD3 245 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 LSM10Q969L4 123 aaKnown RBP8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 ACTL6BO94805 426 aa8.28□□□□□ -1.08
PTCHD4-202ENST00000398738 SYNGR4O95473 234 aa8.28□□□□□ -1.08
PTCHD4-202ENST00000398738 WNT2P09544 360 aa8.28□□□□□ -1.08
PTCHD4-202ENST00000398738 FKBP2P26885 142 aaKnown RBP8.28□□□□□ -1.08
PTCHD4-202ENST00000398738 RPP30P78346 268 aaKnown RBP8.28□□□□□ -1.08
PTCHD4-202ENST00000398738 HTD2P86397 168 aa8.28□□□□□ -1.08
PTCHD4-202ENST00000398738 FXYD3Q14802 87 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms