RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 SLC25A10Q9UBX3 287 aaPredicted RBP12.58□□□□□ -0.4
MBD1-209ENST00000398495 ROS1P08922 2347 aa12.58□□□□□ -0.4
MBD1-209ENST00000398495 PPIAL4EA0A075B759 164 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 PPIAL4DF5H284 164 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 GPR37O15354 613 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 PPIHO43447 177 aaKnown RBP12.57□□□□□ -0.4
MBD1-209ENST00000398495 RBMXL2O75526 392 aaKnown RBP12.57□□□□□ -0.4
MBD1-209ENST00000398495 PPIAL4FP0DN26 164 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 CHRNB4P30926 498 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 CCL20P78556 96 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 ADORA2A-AS1P86434 159 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 CDSNQ15517 529 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 AKR1C8PQ5T2L2 129 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 SPSB3Q6PJ21 355 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 LYPD2Q6UXB3 125 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 VKORC1L1Q8N0U8 176 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 S1PR3Q99500 378 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 ZNF251Q9BRH9 671 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 GAB2Q9UQC2 676 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 PPIAL4AQ9Y536 164 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 hADV38S2A0JD32 116 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 TSPAN4O14817 238 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 RBFOX2O43251 390 aaKnown RBP eCLIP12.57□□□□□ -0.4
MBD1-209ENST00000398495 SIAH2O43255 324 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 C1QTNF9P0C862 333 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 NPBWR1P48145 328 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 PPT1P50897 306 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 ERVFRD-1P60508 538 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 RPS16P62249 146 aaKnown RBP12.57□□□□□ -0.4
MBD1-209ENST00000398495 FBXL19-AS1Q494R0 122 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 C1orf87Q8N0U7 546 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 LYG1Q8N1E2 194 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.57□□□□□ -0.4
MBD1-209ENST00000398495 SCGB1C1Q8TD33 95 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 RBMXL1Q96E39 390 aaKnown RBP12.57□□□□□ -0.4
MBD1-209ENST00000398495 ZNRD1Q9P1U0 126 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 RPUSD1Q9UJJ7 312 aaKnown RBP12.57□□□□□ -0.4
MBD1-209ENST00000398495 PRELID3BQ9Y3B1 194 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 LINC00312Q9Y6C7 94 aa12.57□□□□□ -0.4
MBD1-209ENST00000398495 HCFC1P51610 2035 aa12.56□□□□□ -0.4
MBD1-209ENST00000398495 CEBPZOSA8MTT3 80 aa12.56□□□□□ -0.4
MBD1-209ENST00000398495 MRPS11P82912 194 aaKnown RBP12.56□□□□□ -0.4
MBD1-209ENST00000398495 LRRC75BQ2VPJ9 315 aa12.56□□□□□ -0.4
MBD1-209ENST00000398495 NBEAQ8NFP9 2946 aa12.56□□□□□ -0.4
MBD1-209ENST00000398495 UBE2L5PA0A1B0GUS4 154 aa12.56□□□□□ -0.4
MBD1-209ENST00000398495 TNFRSF13BO14836 293 aaPredicted RBP12.56□□□□□ -0.4
MBD1-209ENST00000398495 APOBEC3AP31941 199 aaPredicted RBP12.56□□□□□ -0.4
MBD1-209ENST00000398495 KIR2DS2P43631 304 aa12.56□□□□□ -0.4
MBD1-209ENST00000398495 PEA15Q15121 130 aa12.56□□□□□ -0.4
MBD1-209ENST00000398495 EFNB3Q15768 340 aa12.56□□□□□ -0.4
MBD1-209ENST00000398495 ZNF383Q8NA42 475 aa12.56□□□□□ -0.4
MBD1-209ENST00000398495 EIF5A2Q9GZV4 153 aaKnown RBP12.56□□□□□ -0.4
MBD1-209ENST00000398495 POLEQ07864 2286 aa12.55□□□□□ -0.4
MBD1-209ENST00000398495 TRAV3A0A0B4J244 114 aa12.55□□□□□ -0.4
MBD1-209ENST00000398495 PMS2P5A8MQ11 134 aa12.55□□□□□ -0.4
MBD1-209ENST00000398495 H2AFB1P0C5Y9 115 aa12.55□□□□□ -0.4
MBD1-209ENST00000398495 CCL3L1P16619 93 aa12.55□□□□□ -0.4
MBD1-209ENST00000398495 RPL31P62899 125 aaKnown RBP12.55□□□□□ -0.4
MBD1-209ENST00000398495 LFNGQ8NES3 379 aa12.55□□□□□ -0.4
MBD1-209ENST00000398495 WDR61Q9GZS3 305 aaKnown RBP12.55□□□□□ -0.4
MBD1-209ENST00000398495 VSIRQ9H7M9 311 aa12.55□□□□□ -0.4
MBD1-209ENST00000398495 CTSZQ9UBR2 303 aa12.55□□□□□ -0.4
MBD1-209ENST00000398495 PKDREJQ9NTG1 2253 aa12.55□□□□□ -0.4
MBD1-209ENST00000398495 FAM90A9PA6NNJ1 464 aa12.54□□□□□ -0.4
MBD1-209ENST00000398495 MEF2CQ06413 473 aaPredicted RBP12.54□□□□□ -0.4
MBD1-209ENST00000398495 TMEM30BQ3MIR4 351 aa12.54□□□□□ -0.4
MBD1-209ENST00000398495 AARDQ4LEZ3 155 aa12.54□□□□□ -0.4
MBD1-209ENST00000398495 SP5Q6BEB4 398 aaPredicted RBP12.54□□□□□ -0.4
MBD1-209ENST00000398495 SLC25A48Q6ZT89 311 aaKnown RBP12.54□□□□□ -0.4
MBD1-209ENST00000398495 OR4S2Q8NH73 311 aa12.54□□□□□ -0.4
MBD1-209ENST00000398495 PARD6GQ9BYG4 376 aaPredicted RBP12.54□□□□□ -0.4
MBD1-209ENST00000398495 TMEM140Q9NV12 185 aa12.54□□□□□ -0.4
MBD1-209ENST00000398495 YLPM1P49750 1951 aaKnown RBP12.54□□□□□ -0.4
MBD1-209ENST00000398495 B9A039 149 aa12.54□□□□□ -0.4
MBD1-209ENST00000398495 OR8U8P0C7N1 319 aa12.54□□□□□ -0.4
MBD1-209ENST00000398495 NQO2P16083 231 aa12.54□□□□□ -0.4
MBD1-209ENST00000398495 THBS3P49746 956 aa12.54□□□□□ -0.4
MBD1-209ENST00000398495 ERVK-16P61578 105 aa12.54□□□□□ -0.4
MBD1-209ENST00000398495 RELBQ01201 579 aa12.54□□□□□ -0.4
MBD1-209ENST00000398495 DPPA3Q6W0C5 159 aa12.54□□□□□ -0.4
MBD1-209ENST00000398495 OR4A16Q8NH70 328 aa12.54□□□□□ -0.4
MBD1-209ENST00000398495 ZCCHC14Q8WYQ9 949 aaKnown RBP12.54□□□□□ -0.4
MBD1-209ENST00000398495 H1FXQ92522 213 aaKnown RBP12.54□□□□□ -0.4
MBD1-209ENST00000398495 CIB3Q96Q77 187 aaPredicted RBP12.54□□□□□ -0.4
MBD1-209ENST00000398495 PSMG3Q9BT73 122 aaPredicted RBP12.54□□□□□ -0.4
MBD1-209ENST00000398495 NDRG3Q9UGV2 375 aa12.54□□□□□ -0.4
MBD1-209ENST00000398495 ARFGEF3Q5TH69 2177 aa12.54□□□□□ -0.4
MBD1-209ENST00000398495 SNAPINO95295 136 aa12.53□□□□□ -0.4
MBD1-209ENST00000398495 TMEM200BQ69YZ2 307 aa12.53□□□□□ -0.4
MBD1-209ENST00000398495 CBLN2Q8IUK8 224 aa12.53□□□□□ -0.4
MBD1-209ENST00000398495 TAF15Q92804 592 aaKnown RBP eCLIP12.53□□□□□ -0.4
MBD1-209ENST00000398495 RARRES2Q99969 163 aa12.53□□□□□ -0.4
MBD1-209ENST00000398495 PBDC1Q9BVG4 233 aa12.53□□□□□ -0.4
MBD1-209ENST00000398495 GAL3ST2Q9H3Q3 398 aa12.53□□□□□ -0.4
MBD1-209ENST00000398495 MS4A5Q9H3V2 200 aa12.53□□□□□ -0.4
MBD1-209ENST00000398495 CISD1Q9NZ45 108 aaKnown RBP12.53□□□□□ -0.4
MBD1-209ENST00000398495 SPTA1P02549 2419 aa12.53□□□□□ -0.4
MBD1-209ENST00000398495 ATRXP46100 2492 aa12.53□□□□□ -0.4
MBD1-209ENST00000398495 IGHV1-69-2A0A0G2JMI3 117 aa12.53□□□□□ -0.4
MBD1-209ENST00000398495 A0A1B0GW64 132 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms