RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 RGPD1P0DJD0 1748 aa9.65□□□□□ -0.86
RGPD2-201ENST00000398146 TRAV24A0A0B4J272 114 aa9.65□□□□□ -0.87
RGPD2-201ENST00000398146 A0A0U1RRA0 63 aa9.65□□□□□ -0.87
RGPD2-201ENST00000398146 GLIPR1P48060 266 aa9.65□□□□□ -0.87
RGPD2-201ENST00000398146 KNTC1P50748 2209 aa9.65□□□□□ -0.87
RGPD2-201ENST00000398146 PAPPAQ13219 1627 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 C1QAP02745 245 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 SOD3P08294 240 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 P2RY1P47900 373 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 RNASE6Q93091 150 aaKnown RBP9.64□□□□□ -0.87
RGPD2-201ENST00000398146 RBKSQ9H477 322 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 TTC3P53804 2025 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 A0A1B0GTL3 188 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 NDUFB6O95139 128 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 PGA4P0DJD7 388 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 PGA5P0DJD9 388 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 OR10J3Q5JRS4 329 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 CBLN4Q9NTU7 201 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 DNAJC13O75165 2243 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 C1QBP02746 253 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 SCTP09683 121 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 COX6A1P12074 109 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 IBA57Q5T440 356 aaKnown RBP9.64□□□□□ -0.87
RGPD2-201ENST00000398146 MIC13Q5XKP0 118 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 GPHA2Q96T91 129 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 SRXN1Q9BYN0 137 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 GSX2Q9BZM3 304 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 EWSR1Q01844 656 aaKnown RBP eCLIP9.64□□□□□ -0.87
RGPD2-201ENST00000398146 ANXA2RQ3ZCQ2 193 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 OR1P1Q8NH06 330 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 RGPD5Q99666 1765 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 A8MWL6 223 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 THBDP07204 575 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 SP5Q6BEB4 398 aaPredicted RBP9.64□□□□□ -0.87
RGPD2-201ENST00000398146 OR51G1Q8NGK1 321 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 TMEM186Q96B77 213 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 CITED2Q99967 270 aaPredicted RBP9.64□□□□□ -0.87
RGPD2-201ENST00000398146 RPRMQ9NS64 109 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 DPM3Q9P2X0 92 aa9.64□□□□□ -0.87
RGPD2-201ENST00000398146 J3QW42 95 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 DEFB104AQ8WTQ1 72 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 SLC17A5Q9NRA2 495 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 TMEFF2Q9UIK5 374 aaPredicted RBP9.63□□□□□ -0.87
RGPD2-201ENST00000398146 KIF13AQ9H1H9 1805 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 PRRC2BQ5JSZ5 2229 aaKnown RBP9.63□□□□□ -0.87
RGPD2-201ENST00000398146 ADARB2-AS1A8MUL3 147 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 SNAI3Q3KNW1 292 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 ZAR1Q86SH2 424 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 VAX2Q9UIW0 290 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 CKS1BP61024 79 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 C1orf53Q5VUE5 145 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 TMEM219Q86XT9 240 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 PAM16Q9Y3D7 125 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 F8WEM9 126 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 OGG1O15527 345 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 MPC2O95563 127 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 BGLAPP02818 100 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 PQLC2Q6ZP29 291 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 C10orf35Q96D05 121 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 C18orf15Q96N68 181 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 IL20Q9NYY1 176 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 LOC390937A0A1W2PQ73 354 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 E9PQ18 207 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 J3QKU1 62 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 K7ERU9 68 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 CELA3AP09093 270 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 RPS11P62280 158 aaKnown RBP eCLIP9.63□□□□□ -0.87
RGPD2-201ENST00000398146 GFI1BQ5VTD9 330 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 C17orf47Q8NEP4 570 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 CHST5Q9GZS9 411 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 HS3ST3B1Q9Y662 390 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 INS-IGF2F8WCM5 200 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 CDC42EP2O14613 210 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 INSP01308 110 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 MYOD1P15172 320 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 WDR82Q6UXN9 313 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 ANGPTL4Q9BY76 406 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 OR51M1Q9H341 326 aa9.63□□□□□ -0.87
RGPD2-201ENST00000398146 BTAF1O14981 1849 aa9.62□□□□□ -0.87
RGPD2-201ENST00000398146 ICAM4Q14773 271 aa9.62□□□□□ -0.87
RGPD2-201ENST00000398146 RPS20P60866 119 aaKnown RBP9.62□□□□□ -0.87
RGPD2-201ENST00000398146 ZIC4Q8N9L1 334 aa9.62□□□□□ -0.87
RGPD2-201ENST00000398146 NPIPB3Q92617 1050 aa9.62□□□□□ -0.87
RGPD2-201ENST00000398146 SHROOM3Q8TF72 1996 aa9.62□□□□□ -0.87
RGPD2-201ENST00000398146 RGPD2P0DJD1 1756 aa9.62□□□□□ -0.87
RGPD2-201ENST00000398146 KLHL30-AS1Q8NEE0 82 aa9.62□□□□□ -0.87
RGPD2-201ENST00000398146 RHOVQ96L33 236 aa9.62□□□□□ -0.87
RGPD2-201ENST00000398146 SCN3AQ9NY46 2000 aa9.62□□□□□ -0.87
RGPD2-201ENST00000398146 ATP5LO75964 103 aa9.62□□□□□ -0.87
RGPD2-201ENST00000398146 NPBWR2P48146 333 aa9.62□□□□□ -0.87
RGPD2-201ENST00000398146 PAPPA-AS1Q5QFB9 102 aa9.62□□□□□ -0.87
RGPD2-201ENST00000398146 RPL39P5Q59GN2 51 aa9.62□□□□□ -0.87
RGPD2-201ENST00000398146 LINC00305Q7Z4B0 112 aa9.62□□□□□ -0.87
RGPD2-201ENST00000398146 PRADC1Q9BSG0 188 aa9.62□□□□□ -0.87
RGPD2-201ENST00000398146 ALX4Q9H161 411 aaPredicted RBP9.62□□□□□ -0.87
RGPD2-201ENST00000398146 IL6RP08887 468 aaPredicted RBP9.61□□□□□ -0.87
RGPD2-201ENST00000398146 TBR1Q16650 682 aa9.61□□□□□ -0.87
RGPD2-201ENST00000398146 CLDND2Q8NHS1 167 aa9.61□□□□□ -0.87
RGPD2-201ENST00000398146 NPIPB4C9JG80 1138 aa9.61□□□□□ -0.87
RGPD2-201ENST00000398146 LCNL1Q6ZST4 164 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms