RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 CXCL1P09341 107 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 COX5BP10606 129 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 SRIP30626 198 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 PPOXP50336 477 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 RPL23P62829 140 aaKnown RBP9.44□□□□□ -0.9
HPS4-202ENST00000398145 VWA1Q6PCB0 445 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 BPIFA4PQ86YQ2 179 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 HS3ST3B1Q9Y662 390 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 VWA8A3KMH1 1905 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 TRBV9A0A0B4J1U6 114 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 IFITM10A6NMD0 228 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 SYNGR3O43761 229 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 FHL1Q13642 323 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 GFI1BQ5VTD9 330 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 WDYHV1Q96HA8 205 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 PRRG2O14669 202 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 PRDX2P32119 198 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 OR1L8Q8NGR8 309 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 ZCCHC14Q8WYQ9 949 aaKnown RBP9.44□□□□□ -0.9
HPS4-202ENST00000398145 HARBI1Q96MB7 349 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 DUSP15Q9H1R2 295 aaPredicted RBP9.44□□□□□ -0.9
HPS4-202ENST00000398145 RNF24Q9Y225 148 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 A6NDN8 102 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 CTSSP25774 331 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 WNT5AP41221 380 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 RIGQ13278 110 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 SHISA5Q8N114 240 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 OR4D5Q8NGN0 318 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 TMEM45BQ96B21 275 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 NPCDR1Q9BY65 106 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 TMEM242Q9NWH2 141 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 OR51B2Q9Y5P1 312 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 MGST3O14880 152 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 RPL31P62899 125 aaKnown RBP9.43□□□□□ -0.9
HPS4-202ENST00000398145 C12orf54Q6X4T0 127 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 TMEM170AQ8WVE7 144 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 PAXXQ9BUH6 204 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 LOC102724200A0A096LPH7 203 aaPredicted RBP9.43□□□□□ -0.9
HPS4-202ENST00000398145 CORTO00230 105 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 CRYBB3P26998 211 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 LEMD1Q68G75 181 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 MOGAT3Q86VF5 341 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 PERPQ96FX8 193 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 A0A1B0GW64 132 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 ZNF137PP52743 207 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 LYZP61626 148 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 FXYD3Q14802 87 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 A0A1W2PR77 199 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 PROB1E7EW31 1015 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 CFPP27918 469 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 ERVFRD-1P60508 538 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 MST1LQ2TV78 715 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 SLC25A53Q5H9E4 307 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 OR4A47Q6IF82 309 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 GNB4Q9HAV0 340 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 CLEC1BQ9P126 229 aa9.43□□□□□ -0.9
HPS4-202ENST00000398145 CNOT1A5YKK6 2376 aaKnown RBP9.42□□□□□ -0.9
HPS4-202ENST00000398145 ODAMA1E959 279 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 UCP2P55851 309 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 ZNF826PQ6ZT77 177 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 ZNF837Q96EG3 531 aaPredicted RBP9.42□□□□□ -0.9
HPS4-202ENST00000398145 LYZL4Q96KX0 146 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 CHCHD2Q9Y6H1 151 aaPredicted RBP9.42□□□□□ -0.9
HPS4-202ENST00000398145 IGKV1D-13A0A0B4J2D9 117 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 IGKV1-13P0DP09 117 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 LYL1P12980 280 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 MPV17P39210 176 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 PCOLCEQ15113 449 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 DMRTA1Q5VZB9 504 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 FLYWCH2Q96CP2 140 aaKnown RBP9.42□□□□□ -0.9
HPS4-202ENST00000398145 KLHDC3Q9BQ90 382 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 PARD6GQ9BYG4 376 aaPredicted RBP9.42□□□□□ -0.9
HPS4-202ENST00000398145 ARRDC1-AS1Q9H2J1 176 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 PLXNA3P51805 1871 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 DPRXA6NFQ7 191 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 TMPRSS2O15393 492 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 NDUFS6O75380 124 aaKnown RBP9.42□□□□□ -0.9
HPS4-202ENST00000398145 HSPE1P61604 102 aaKnown RBP9.42□□□□□ -0.9
HPS4-202ENST00000398145 TIMD4Q96H15 378 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 DMRTA2Q96SC8 542 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 FOXJ2Q9P0K8 574 aa9.42□□□□□ -0.9
HPS4-202ENST00000398145 C9JQL5 133 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 LEPROTL1O95214 131 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 TIAF1O95411 115 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 PRSS1P07477 247 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 GCHFRP30047 84 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 QRFPP83859 136 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 ABHD12Q8N2K0 398 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 TCF19Q9Y242 345 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 PHF3Q92576 2039 aaKnown RBP9.41□□□□□ -0.9
HPS4-202ENST00000398145 AGFG2O95081 481 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 AMY1AP04745 511 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 LINC00869P0C866 280 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 GPX4P36969 197 aaPredicted RBP9.41□□□□□ -0.9
HPS4-202ENST00000398145 CEBPDP49716 269 aaPredicted RBP9.41□□□□□ -0.9
HPS4-202ENST00000398145 HES3Q5TGS1 186 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 TTTY12Q9BZ98 90 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 TMEM140Q9NV12 185 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 ROS1P08922 2347 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 HEATR5AQ86XA9 2040 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms