RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 VAMP3Q15836 100 aa9.42□□□□□ -0.9
CSGALNACT1-202ENST00000397998 TMEM42Q69YG0 159 aa9.42□□□□□ -0.9
CSGALNACT1-202ENST00000397998 LYG1Q8N1E2 194 aa9.42□□□□□ -0.9
CSGALNACT1-202ENST00000397998 ZNF645Q8N7E2 425 aa9.42□□□□□ -0.9
CSGALNACT1-202ENST00000397998 ZBTB34Q8NCN2 500 aa9.42□□□□□ -0.9
CSGALNACT1-202ENST00000397998 PLPPR1Q8TBJ4 325 aa9.42□□□□□ -0.9
CSGALNACT1-202ENST00000397998 IER2Q9BTL4 223 aa9.42□□□□□ -0.9
CSGALNACT1-202ENST00000397998 MRPL18Q9H0U6 180 aaKnown RBP9.42□□□□□ -0.9
CSGALNACT1-202ENST00000397998 SH2D2AQ9NP31 389 aa9.42□□□□□ -0.9
CSGALNACT1-202ENST00000397998 CACNA1GO43497 2377 aa9.42□□□□□ -0.9
CSGALNACT1-202ENST00000397998 DOCK10Q96BY6 2186 aa9.42□□□□□ -0.9
CSGALNACT1-202ENST00000397998 SLC17A3O00476 420 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 OR4A8P0C604 315 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 CAMPP49913 170 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 ZNF324BQ6AW86 544 aaPredicted RBP9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 DTX1Q86Y01 620 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 VKORC1L1Q8N0U8 176 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 SFRP2Q96HF1 295 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 FER1L6-AS2Q96M78 137 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 TMEM68Q96MH6 324 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 MARCH11A6NNE9 402 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 C17orf98A8MV24 154 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 RAMP3O60896 148 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 GNG10P50151 68 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 PTTG1IPP53801 180 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 PAX9P55771 341 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 UBE2G1P62253 170 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 SAP25Q8TEE9 199 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 TWSG1Q9GZX9 223 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 PCDH15Q96QU1 1955 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 C5orf42Q9H799 3197 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 IGKV1-6A0A0C4DH72 117 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 HELTA6NFD8 242 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 HPRT1P00492 218 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 IGKV1-5P01602 117 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 GCSAMLQ5JQS6 135 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 C20orf204Q6ZNR8 217 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 ABHD12Q8N2K0 398 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 ARL2-SNX15V9GYD0 113 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 LAMA3Q16787 3333 aa9.41□□□□□ -0.9
CSGALNACT1-202ENST00000397998 WNT9BO14905 357 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 AGFG2O95081 481 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 UCP2P55851 309 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 RNASEKQ6P5S7 137 aaKnown RBP9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 TMEM178AQ8NBL3 297 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 SSC4DQ8WTU2 575 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 SLC35E1Q96K37 410 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 PKIBQ9C010 78 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 C20orf202A1L168 122 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 VENTXO95231 258 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 SSTR5P35346 364 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 CCL11P51671 97 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 RND2P52198 227 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 PAFAH1B2P68402 229 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 QTRT1Q9BXR0 403 aaKnown RBP9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 SPTA1P02549 2419 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 ETV2O00321 342 aaPredicted RBP9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 FXYD3Q14802 87 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 FBXW9Q5XUX1 488 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 TMEM256Q8N2U0 113 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 C22orf15Q8WYQ4 148 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 WDYHV1Q96HA8 205 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 SLC45A2Q9UMX9 530 aa9.4□□□□□ -0.9
CSGALNACT1-202ENST00000397998 CLDN14O95500 239 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 LCN2P80188 198 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 ASCL4Q6XD76 172 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 TMPRSS7Q7RTY8 843 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 C11orf42Q8N5U0 333 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 TMEM251Q8N6I4 163 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 TTTY12Q9BZ98 90 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 COMMD5Q9GZQ3 224 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 TIMM9Q9Y5J7 89 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 C12orf77C9JDV5 145 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 NPY1RP25929 384 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 UNQ6494/PRO21346Q6UXR6 183 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 TCTEX1D1Q8N7M0 179 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 MAFAQ8NHW3 353 aaPredicted RBP9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 FAM216AQ8WUB2 273 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 THADAQ6YHU6 1953 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 RAB29O14966 203 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 IGLV3-1P01715 115 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 APOA2P02652 100 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 OR10J4P0C629 311 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 BRS3P32247 399 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 RPL31P62899 125 aaKnown RBP9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 TEPPQ6URK8 271 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 SLC24A4Q8NFF2 622 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 TPPP3Q9BW30 176 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 NPVFQ9HCQ7 196 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 SCO2A0A1W2PP80 73 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 EREGO14944 169 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 SPRY3O43610 288 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 ENSAO43768 121 aaKnown RBP9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 TFF1P04155 84 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 ZNF726P1Q15940 193 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 COL5A1-AS1Q5SY13 56 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 DEPPQ9NTK1 212 aa9.39□□□□□ -0.91
CSGALNACT1-202ENST00000397998 A0A1B0GUS0 222 aa9.38□□□□□ -0.91
CSGALNACT1-202ENST00000397998 IFITM10A6NMD0 228 aa9.38□□□□□ -0.91
CSGALNACT1-202ENST00000397998 A8MWP6 167 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms