RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 FOXL1Q12952 345 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 LPAL2Q16609 132 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 LRRC75BQ2VPJ9 315 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 SPANXN5Q5MJ07 72 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 OR4F5Q8NH21 305 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 OR4F4Q96R69 305 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 RNF2Q99496 336 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 TP53TG3Q9ULZ0 132 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 DIDO1Q9BTC0 2240 aaKnown RBP13.46□□□□□ -0.25
CHMP1A-201ENST00000397901 GRIFINA4D1Z8 144 aa13.46□□□□□ -0.25
CHMP1A-201ENST00000397901 CBY3A6NI87 242 aa13.46□□□□□ -0.25
CHMP1A-201ENST00000397901 YPEL3P61236 119 aaPredicted RBP13.46□□□□□ -0.25
CHMP1A-201ENST00000397901 SUMO1P63165 101 aaKnown RBP13.46□□□□□ -0.25
CHMP1A-201ENST00000397901 TESK1Q15569 626 aa13.46□□□□□ -0.25
CHMP1A-201ENST00000397901 MORN2Q502X0 79 aa13.46□□□□□ -0.25
CHMP1A-201ENST00000397901 SPATA45Q537H7 98 aa13.46□□□□□ -0.25
CHMP1A-201ENST00000397901 SPINK14Q6IE38 97 aa13.46□□□□□ -0.25
CHMP1A-201ENST00000397901 OR4C5Q8NGB2 326 aa13.46□□□□□ -0.25
CHMP1A-201ENST00000397901 OR5A2Q8NGI9 324 aa13.46□□□□□ -0.25
CHMP1A-201ENST00000397901 SVIPQ8NHG7 77 aa13.46□□□□□ -0.25
CHMP1A-201ENST00000397901 TMEM45BQ96B21 275 aa13.46□□□□□ -0.25
CHMP1A-201ENST00000397901 TXN2Q99757 166 aa13.46□□□□□ -0.25
CHMP1A-201ENST00000397901 DLL3Q9NYJ7 618 aa13.46□□□□□ -0.25
CHMP1A-201ENST00000397901 PLA2G3Q9NZ20 509 aa13.46□□□□□ -0.25
CHMP1A-201ENST00000397901 F6UZH7 168 aa13.46□□□□□ -0.26
CHMP1A-201ENST00000397901 HMGB3O15347 200 aaKnown RBP13.46□□□□□ -0.26
CHMP1A-201ENST00000397901 RHBDL1O75783 438 aa13.46□□□□□ -0.26
CHMP1A-201ENST00000397901 IGLV2-14P01704 120 aa13.46□□□□□ -0.26
CHMP1A-201ENST00000397901 CELA3AP09093 270 aa13.46□□□□□ -0.26
CHMP1A-201ENST00000397901 SLC25A6P12236 298 aa13.46□□□□□ -0.26
CHMP1A-201ENST00000397901 Q6ZN92 141 aa13.46□□□□□ -0.26
CHMP1A-201ENST00000397901 C1orf174Q8IYL3 243 aa13.46□□□□□ -0.26
CHMP1A-201ENST00000397901 FAM58AQ8N1B3 248 aa13.46□□□□□ -0.26
CHMP1A-201ENST00000397901 CORO2AQ92828 525 aa13.46□□□□□ -0.26
CHMP1A-201ENST00000397901 OR4C12Q96R67 309 aa13.46□□□□□ -0.26
CHMP1A-201ENST00000397901 HSPB7Q9UBY9 170 aa13.46□□□□□ -0.26
CHMP1A-201ENST00000397901 FRYQ5TBA9 3013 aa13.46□□□□□ -0.26
CHMP1A-201ENST00000397901 IGHV2-70DA0A0C4DH43 119 aa13.45□□□□□ -0.26
CHMP1A-201ENST00000397901 UBE2L5PA0A1B0GUS4 154 aa13.45□□□□□ -0.26
CHMP1A-201ENST00000397901 MLNRO43193 412 aa13.45□□□□□ -0.26
CHMP1A-201ENST00000397901 SERF1AO75920 110 aa13.45□□□□□ -0.26
CHMP1A-201ENST00000397901 CYB561P49447 251 aa13.45□□□□□ -0.26
CHMP1A-201ENST00000397901 LINC00310P59036 64 aa13.45□□□□□ -0.26
CHMP1A-201ENST00000397901 TMEM105Q8N8V8 129 aa13.45□□□□□ -0.26
CHMP1A-201ENST00000397901 OR5P3Q8WZ94 311 aa13.45□□□□□ -0.26
CHMP1A-201ENST00000397901 ZDHHC11Q9H8X9 412 aa13.45□□□□□ -0.26
CHMP1A-201ENST00000397901 TUBG2Q9NRH3 451 aa13.45□□□□□ -0.26
CHMP1A-201ENST00000397901 WDR1O75083 606 aa13.45□□□□□ -0.26
CHMP1A-201ENST00000397901 IGHEP01854 428 aa13.45□□□□□ -0.26
CHMP1A-201ENST00000397901 ESPL1Q14674 2120 aa13.45□□□□□ -0.26
CHMP1A-201ENST00000397901 FBLN7Q53RD9 439 aa13.45□□□□□ -0.26
CHMP1A-201ENST00000397901 VPS25Q9BRG1 176 aa13.45□□□□□ -0.26
CHMP1A-201ENST00000397901 ELOVL5Q9NYP7 299 aa13.45□□□□□ -0.26
CHMP1A-201ENST00000397901 DEGS1O15121 323 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 IGLC2P0DOY2 106 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 IGLC3P0DOY3 106 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 HBG1P69891 147 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 HBG2P69892 147 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 NRN1LQ496H8 165 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 OR5T1Q8NG75 326 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 LSM10Q969L4 123 aaKnown RBP13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 APH1AQ96BI3 265 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 NEIL1Q96FI4 390 aaPredicted RBP13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 SAMD10Q9BYL1 202 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 WDR61Q9GZS3 305 aaKnown RBP13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 IGHV2OR16-5A0A0B4J2B6 119 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 ANKRD30BLA7E2S9 258 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 SIRPB1O00241 398 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 GALR2O43603 387 aaPredicted RBP13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 CIDEAO60543 219 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 HYPMO75409 117 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 CRISP2P16562 243 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 BMP5P22003 454 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 ZNF585BQ52M93 769 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 SPATA46Q5T0L3 261 aa13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 ZNF703Q9H7S9 590 aaPredicted RBP13.44□□□□□ -0.26
CHMP1A-201ENST00000397901 TRBV6-6A0A0A6YYG2 114 aa13.43□□□□□ -0.26
CHMP1A-201ENST00000397901 DIRC3C9JPN6 131 aa13.43□□□□□ -0.26
CHMP1A-201ENST00000397901 CA6P23280 308 aa13.43□□□□□ -0.26
CHMP1A-201ENST00000397901 LHX2P50458 406 aa13.43□□□□□ -0.26
CHMP1A-201ENST00000397901 DCAF12Q5T6F0 453 aa13.43□□□□□ -0.26
CHMP1A-201ENST00000397901 RPP25LQ8N5L8 163 aaKnown RBP13.43□□□□□ -0.26
CHMP1A-201ENST00000397901 BET1LQ9NYM9 111 aa13.43□□□□□ -0.26
CHMP1A-201ENST00000397901 TNRC6AQ8NDV7 1962 aaKnown RBP13.43□□□□□ -0.26
CHMP1A-201ENST00000397901 IGKV3D-15A0A087WSY6 115 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 IGHV3-64DA0A0J9YX35 117 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 IGKV1D-33P01593 117 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 IGKV1-33P01594 117 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 WNT2P09544 360 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 ZNF883P0CG24 379 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 UNQ5815/PRO19632Q6UWF5 114 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 TCF23Q7RTU1 214 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 POM121L2Q96KW2 1035 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 HES7Q9BYE0 225 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 ZNF586Q9NXT0 402 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 KRASP01116 189 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 GNG3P63215 75 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 SLC38A11Q08AI6 406 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 CLEC2AQ6UVW9 174 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 LINC00596Q86U02 117 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms