RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 CSN1S1P47710 185 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 COMPP49747 757 aaPredicted RBP6.9□□□□□ -1.31
PTPRD-204ENST00000397606 HMGN3Q15651 99 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 ANKRD55Q3KP44 614 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 MORN2Q502X0 79 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 FAM122CQ6P4D5 195 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 HEPN1Q6WQI6 88 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 IL34Q6ZMJ4 242 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 ST6GAL2Q96JF0 529 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 GPHA2Q96T91 129 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 TLNRD1Q9H1K6 362 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 TLN1Q9Y490 2541 aaKnown RBP6.9□□□□□ -1.31
PTPRD-204ENST00000397606 IGHV3OR16-10A0A075B7F0 116 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 SOX15O60248 233 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 KBTBD11O94819 623 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 SELLP14151 372 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 HSPE1P61604 102 aaKnown RBP6.9□□□□□ -1.31
PTPRD-204ENST00000397606 SLC35B1P78383 322 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 TMEM187Q14656 261 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 Q6P435 159 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 LCN15Q6UWW0 184 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 BPIFCQ8NFQ6 507 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 OR2T6Q8NHC8 308 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 PARP12Q9H0J9 701 aaKnown RBP6.9□□□□□ -1.31
PTPRD-204ENST00000397606 PARP11Q9NR21 331 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 RPUSD1Q9UJJ7 312 aaKnown RBP6.9□□□□□ -1.31
PTPRD-204ENST00000397606 RPH3ALQ9UNE2 315 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 SPTBN4Q9H254 2564 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 CHD9Q3L8U1 2897 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 IGKV1D-17A0A075B6S4 117 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 CORTO00230 105 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 RNF144BQ7Z419 303 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 SLC24A4Q8NFF2 622 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 ITLN2Q8WWU7 325 aaPredicted RBP6.89□□□□□ -1.31
PTPRD-204ENST00000397606 GPR146Q96CH1 333 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 GAFA1Q96PS6 74 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 CFHR2P36980 270 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 HSD17B13Q7Z5P4 300 aaPredicted RBP6.89□□□□□ -1.31
PTPRD-204ENST00000397606 DAZAP1Q96EP5 407 aaKnown RBP6.89□□□□□ -1.31
PTPRD-204ENST00000397606 TRBV6-6A0A0A6YYG2 114 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 MARVELD3Q96A59 401 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 ATP5SQ99766 215 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 SHISA9B4DS77 424 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 TSPAN4O14817 238 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 UCP1P25874 307 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 SIGIRRQ6IA17 410 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 MARC2Q969Z3 335 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 TP53RKQ96S44 253 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 CABLES2Q9BTV7 478 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 BPESC1Q9GZL8 116 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 IFT22Q9H7X7 185 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 C19orf12Q9NSK7 152 aa6.89□□□□□ -1.31
PTPRD-204ENST00000397606 LY6HO94772 140 aa6.88□□□□□ -1.31
PTPRD-204ENST00000397606 DYNLT3P51808 116 aa6.88□□□□□ -1.31
PTPRD-204ENST00000397606 ZNF525Q8N782 197 aa6.88□□□□□ -1.31
PTPRD-204ENST00000397606 ZNF680Q8NEM1 530 aa6.88□□□□□ -1.31
PTPRD-204ENST00000397606 OR1L4Q8NGR5 311 aa6.88□□□□□ -1.31
PTPRD-204ENST00000397606 BORCS7Q96B45 105 aa6.88□□□□□ -1.31
PTPRD-204ENST00000397606 GRAMD2BQ96HH9 432 aa6.88□□□□□ -1.31
PTPRD-204ENST00000397606 RANBP2P49792 3224 aaKnown RBP6.88□□□□□ -1.31
PTPRD-204ENST00000397606 PIEZO2Q9H5I5 2752 aa6.88□□□□□ -1.31
PTPRD-204ENST00000397606 NUPL2O15504 423 aaKnown RBP6.88□□□□□ -1.31
PTPRD-204ENST00000397606 SLC25A4P12235 298 aa6.88□□□□□ -1.31
PTPRD-204ENST00000397606 EWSR1Q01844 656 aaKnown RBP eCLIP6.88□□□□□ -1.31
PTPRD-204ENST00000397606 SOHLH1Q5JUK2 328 aa6.88□□□□□ -1.31
PTPRD-204ENST00000397606 FFAR4Q5NUL3 377 aa6.88□□□□□ -1.31
PTPRD-204ENST00000397606 TMEM200BQ69YZ2 307 aa6.88□□□□□ -1.31
PTPRD-204ENST00000397606 QTRT1Q9BXR0 403 aaKnown RBP6.88□□□□□ -1.31
PTPRD-204ENST00000397606 YAE1D1Q9NRH1 226 aa6.88□□□□□ -1.31
PTPRD-204ENST00000397606 METRNQ9UJH8 293 aa6.88□□□□□ -1.31
PTPRD-204ENST00000397606 DVL1P1P54792 670 aaPredicted RBP6.88□□□□□ -1.31
PTPRD-204ENST00000397606 LY6EQ16553 131 aa6.88□□□□□ -1.31
PTPRD-204ENST00000397606 TAGLN2P37802 199 aaKnown RBP6.88□□□□□ -1.31
PTPRD-204ENST00000397606 EXOSC2Q13868 293 aaKnown RBP6.88□□□□□ -1.31
PTPRD-204ENST00000397606 GUSBP1Q15486 140 aa6.88□□□□□ -1.31
PTPRD-204ENST00000397606 PHYHIPLQ96FC7 376 aa6.88□□□□□ -1.31
PTPRD-204ENST00000397606 SAA2-SAA4A0A096LPE2 208 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 M0R1W7 72 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 SAA2P0DJI9 122 aaPredicted RBP6.87□□□□□ -1.31
PTPRD-204ENST00000397606 APELAP0DMC3 54 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 CD37P11049 281 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 ATP5IP56385 69 aaPredicted RBP6.87□□□□□ -1.31
PTPRD-204ENST00000397606 KRTAP27-1Q3LI81 207 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 UNQ5815/PRO19632Q6UWF5 114 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 CCDC28AQ8IWP9 274 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 OR5B3Q8NH48 314 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 PCNPQ8WW12 178 aaKnown RBP6.87□□□□□ -1.31
PTPRD-204ENST00000397606 RNF2Q99496 336 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 MRPL20Q9BYC9 149 aaKnown RBP6.87□□□□□ -1.31
PTPRD-204ENST00000397606 WSB1Q9Y6I7 421 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 TP53BP1Q12888 1972 aaPredicted RBP6.87□□□□□ -1.31
PTPRD-204ENST00000397606 MOSP00540 346 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 MBPP02686 304 aaPredicted RBP6.87□□□□□ -1.31
PTPRD-204ENST00000397606 IGHV1-8P0DP01 117 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 LMO1P25800 156 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 RHOBP62745 196 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 TNFRSF9Q07011 255 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 BTNL8Q6UX41 500 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 Q8WTZ3 238 aa6.87□□□□□ -1.31
PTPRD-204ENST00000397606 RTBDNQ9BSG5 229 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms