RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 OR2B11Q5JQS5 317 aa19.02■□□□□ 0.64
TSPAN4-202ENST00000397396 RUSC1-AS1Q66K80 236 aa19.02■□□□□ 0.64
TSPAN4-202ENST00000397396 BRD3OSQ6XYD6 125 aa19.02■□□□□ 0.64
TSPAN4-202ENST00000397396 C9orf139Q6ZV77 190 aa19.02■□□□□ 0.64
TSPAN4-202ENST00000397396 OR4C13Q8NGP0 309 aa19.02■□□□□ 0.64
TSPAN4-202ENST00000397396 OSR1Q8TAX0 266 aaPredicted RBP19.02■□□□□ 0.64
TSPAN4-202ENST00000397396 TMUB1Q9BVT8 246 aa19.02■□□□□ 0.64
TSPAN4-202ENST00000397396 TIMM23O14925 209 aa19.01■□□□□ 0.63
TSPAN4-202ENST00000397396 IFNA21P01568 189 aa19.01■□□□□ 0.63
TSPAN4-202ENST00000397396 LPAR6P43657 344 aa19.01■□□□□ 0.63
TSPAN4-202ENST00000397396 ZNF585BQ52M93 769 aa19.01■□□□□ 0.63
TSPAN4-202ENST00000397396 TMEM268Q5VZI3 342 aa19.01■□□□□ 0.63
TSPAN4-202ENST00000397396 FLYWCH2Q96CP2 140 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-202ENST00000397396 RAB18Q9NP72 206 aa19.01■□□□□ 0.63
TSPAN4-202ENST00000397396 RAMP3O60896 148 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 CRYZL1O95825 349 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 HRASP01112 189 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 ERVK-16P61578 105 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 RRAS2P62070 204 aaPredicted RBP19■□□□□ 0.63
TSPAN4-202ENST00000397396 SCGB2A2Q13296 93 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 LIN54Q6MZP7 749 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 UXS1Q8NBZ7 420 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 RNF5Q99942 180 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 MEGF9Q9H1U4 602 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 TMED3Q9Y3Q3 217 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 DBX1A6NMT0 343 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 TRAPPC2P0DI81 140 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 TRAPPC2BP0DI82 140 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 NQO2P16083 231 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 DYNLT3P51808 116 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 LINC00205P59089 165 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 AANATQ16613 207 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 TMEM177Q53S58 311 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 SELENOHQ8IZQ5 122 aaKnown RBP19■□□□□ 0.63
TSPAN4-202ENST00000397396 RNASE11Q8TAA1 199 aaKnown RBP19■□□□□ 0.63
TSPAN4-202ENST00000397396 CFHR4Q92496 578 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 AJUBAQ96IF1 538 aa19■□□□□ 0.63
TSPAN4-202ENST00000397396 FLNAP21333 2647 aaKnown RBP18.99■□□□□ 0.63
TSPAN4-202ENST00000397396 MAST4O15021 2626 aa18.99■□□□□ 0.63
TSPAN4-202ENST00000397396 hCG_2014768A0A024R1R8 64 aa18.99■□□□□ 0.63
TSPAN4-202ENST00000397396 A0A0U1RQK1 487 aa18.99■□□□□ 0.63
TSPAN4-202ENST00000397396 S1PR2O95136 353 aa18.99■□□□□ 0.63
TSPAN4-202ENST00000397396 VDAC1P21796 283 aa18.99■□□□□ 0.63
TSPAN4-202ENST00000397396 LGALS7P47929 136 aa18.99■□□□□ 0.63
TSPAN4-202ENST00000397396 AKR1C2P52895 323 aa18.99■□□□□ 0.63
TSPAN4-202ENST00000397396 BRWD1-AS2P59051 145 aa18.99■□□□□ 0.63
TSPAN4-202ENST00000397396 FAM120AOSQ5T036 256 aa18.99■□□□□ 0.63
TSPAN4-202ENST00000397396 FAM219AQ8IW50 185 aa18.99■□□□□ 0.63
TSPAN4-202ENST00000397396 SLC35G3Q8N808 338 aa18.99■□□□□ 0.63
TSPAN4-202ENST00000397396 RRNAD1Q96FB5 475 aaKnown RBP18.99■□□□□ 0.63
TSPAN4-202ENST00000397396 VGLL3A8MV65 326 aa18.98■□□□□ 0.63
TSPAN4-202ENST00000397396 VENTXO95231 258 aa18.98■□□□□ 0.63
TSPAN4-202ENST00000397396 FAM106CPP0CH98 169 aa18.98■□□□□ 0.63
TSPAN4-202ENST00000397396 HLA-GP17693 338 aa18.98■□□□□ 0.63
TSPAN4-202ENST00000397396 SRP14P37108 136 aaKnown RBP18.98■□□□□ 0.63
TSPAN4-202ENST00000397396 THNSL2Q86YJ6 484 aa18.98■□□□□ 0.63
TSPAN4-202ENST00000397396 LHFPL5Q8TAF8 219 aa18.98■□□□□ 0.63
TSPAN4-202ENST00000397396 C17orf50Q8WW18 174 aa18.98■□□□□ 0.63
TSPAN4-202ENST00000397396 LSM10Q969L4 123 aaKnown RBP18.98■□□□□ 0.63
TSPAN4-202ENST00000397396 HARBI1Q96MB7 349 aa18.98■□□□□ 0.63
TSPAN4-202ENST00000397396 SPIN2AQ99865 258 aa18.98■□□□□ 0.63
TSPAN4-202ENST00000397396 SPIN2BQ9BPZ2 258 aa18.98■□□□□ 0.63
TSPAN4-202ENST00000397396 PRR13Q9NZ81 148 aa18.98■□□□□ 0.63
TSPAN4-202ENST00000397396 MARCH11A6NNE9 402 aa18.97■□□□□ 0.63
TSPAN4-202ENST00000397396 SHOXO15266 292 aa18.97■□□□□ 0.63
TSPAN4-202ENST00000397396 IGKV1-16P04430 117 aa18.97■□□□□ 0.63
TSPAN4-202ENST00000397396 BCAP31P51572 246 aa18.97■□□□□ 0.63
TSPAN4-202ENST00000397396 CADM3Q8N126 398 aa18.97■□□□□ 0.63
TSPAN4-202ENST00000397396 DYNAPQ8N1N2 210 aa18.97■□□□□ 0.63
TSPAN4-202ENST00000397396 OR2T10Q8NGZ9 312 aa18.97■□□□□ 0.63
TSPAN4-202ENST00000397396 VSTM2AQ8TAG5 236 aa18.97■□□□□ 0.63
TSPAN4-202ENST00000397396 R3HDM4Q96D70 268 aa18.97■□□□□ 0.63
TSPAN4-202ENST00000397396 TSNAXQ99598 290 aaKnown RBP18.97■□□□□ 0.63
TSPAN4-202ENST00000397396 IGHV3-72A0A0B4J1Y9 119 aa18.96■□□□□ 0.63
TSPAN4-202ENST00000397396 A0A1B0GVG6 124 aa18.96■□□□□ 0.63
TSPAN4-202ENST00000397396 HMX3A6NHT5 357 aa18.96■□□□□ 0.63
TSPAN4-202ENST00000397396 FAM90A9PA6NNJ1 464 aa18.96■□□□□ 0.63
TSPAN4-202ENST00000397396 GOSR2O14653 212 aa18.96■□□□□ 0.63
TSPAN4-202ENST00000397396 MOSP00540 346 aa18.96■□□□□ 0.63
TSPAN4-202ENST00000397396 RPS16P62249 146 aaKnown RBP18.96■□□□□ 0.63
TSPAN4-202ENST00000397396 POU2AF1Q16633 256 aa18.96■□□□□ 0.63
TSPAN4-202ENST00000397396 CHAC2Q8WUX2 184 aa18.96■□□□□ 0.63
TSPAN4-202ENST00000397396 ASB13Q8WXK3 278 aa18.96■□□□□ 0.63
TSPAN4-202ENST00000397396 MGAT4CQ9UBM8 478 aa18.96■□□□□ 0.63
TSPAN4-202ENST00000397396 SPDEFO95238 335 aa18.95■□□□□ 0.62
TSPAN4-202ENST00000397396 IGKV1-39P01597 117 aa18.95■□□□□ 0.62
TSPAN4-202ENST00000397396 IGKV1D-39P04432 117 aa18.95■□□□□ 0.62
TSPAN4-202ENST00000397396 HOXB5P09067 269 aa18.95■□□□□ 0.62
TSPAN4-202ENST00000397396 SULT1A3P0DMM9 295 aa18.95■□□□□ 0.62
TSPAN4-202ENST00000397396 SULT1A4P0DMN0 295 aa18.95■□□□□ 0.62
TSPAN4-202ENST00000397396 EBI3Q14213 229 aa18.95■□□□□ 0.62
TSPAN4-202ENST00000397396 LRRC75BQ2VPJ9 315 aa18.95■□□□□ 0.62
TSPAN4-202ENST00000397396 VMA21Q3ZAQ7 101 aa18.95■□□□□ 0.62
TSPAN4-202ENST00000397396 LYZL2Q7Z4W2 148 aa18.95■□□□□ 0.62
TSPAN4-202ENST00000397396 DMBX1Q8NFW5 382 aa18.95■□□□□ 0.62
TSPAN4-202ENST00000397396 OR5M8Q8NGP6 311 aa18.95■□□□□ 0.62
TSPAN4-202ENST00000397396 SEC22AQ96IW7 307 aa18.95■□□□□ 0.62
TSPAN4-202ENST00000397396 MMP24Q9Y5R2 645 aa18.95■□□□□ 0.62
TSPAN4-202ENST00000397396 AKAP9Q99996 3911 aa18.95■□□□□ 0.62
TSPAN4-202ENST00000397396 LY6G6DO95868 133 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms