RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 RRNAD1Q96FB5 475 aaKnown RBP11.04□□□□□ -0.64
MCF2L-209ENST00000397036 LPAR2Q9HBW0 351 aa11.04□□□□□ -0.64
MCF2L-209ENST00000397036 SIRT7Q9NRC8 400 aa11.04□□□□□ -0.64
MCF2L-209ENST00000397036 TBL2Q9Y4P3 447 aaKnown RBP11.04□□□□□ -0.64
MCF2L-209ENST00000397036 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.03□□□□□ -0.64
MCF2L-209ENST00000397036 HMSDA8MTL9 139 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 H0YJW9 148 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 BOLA2-SMG1P6H3BVE0 249 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 PITX3O75364 302 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 IGKV1-5P01602 117 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 APOA2P02652 100 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 SLC25A4P12235 298 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 NQO2P16083 231 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 HOXB4P17483 251 aaPredicted RBP11.03□□□□□ -0.64
MCF2L-209ENST00000397036 COX7A1P24310 79 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 RAB13P51153 203 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 TMEM65Q6PI78 240 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 PDPNQ86YL7 162 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 OR8H3Q8N146 312 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 OR4D5Q8NGN0 318 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 GPR146Q96CH1 333 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 WDR89Q96FK6 387 aaPredicted RBP11.03□□□□□ -0.64
MCF2L-209ENST00000397036 MRPL20Q9BYC9 149 aaKnown RBP11.03□□□□□ -0.64
MCF2L-209ENST00000397036 SLC35D1Q9NTN3 355 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 CACFD1Q9UGQ2 172 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 CCDC168Q8NDH2 2452 aa11.03□□□□□ -0.64
MCF2L-209ENST00000397036 HECTD1Q9ULT8 2610 aa11.02□□□□□ -0.65
MCF2L-209ENST00000397036 S1PR2O95136 353 aa11.02□□□□□ -0.65
MCF2L-209ENST00000397036 ARG1P05089 322 aa11.02□□□□□ -0.65
MCF2L-209ENST00000397036 LYL1P12980 280 aa11.02□□□□□ -0.65
MCF2L-209ENST00000397036 HABP2Q14520 560 aaPredicted RBP11.02□□□□□ -0.65
MCF2L-209ENST00000397036 MIDNQ504T8 468 aa11.02□□□□□ -0.65
MCF2L-209ENST00000397036 TMEM177Q53S58 311 aa11.02□□□□□ -0.65
MCF2L-209ENST00000397036 Q5BKY6 102 aa11.02□□□□□ -0.65
MCF2L-209ENST00000397036 TPTE2P1Q5T6R2 138 aa11.02□□□□□ -0.65
MCF2L-209ENST00000397036 THOC7Q6I9Y2 204 aaKnown RBP11.02□□□□□ -0.65
MCF2L-209ENST00000397036 OSR1Q8TAX0 266 aaPredicted RBP11.02□□□□□ -0.65
MCF2L-209ENST00000397036 RPEQ96AT9 228 aa11.02□□□□□ -0.65
MCF2L-209ENST00000397036 RNF5Q99942 180 aa11.02□□□□□ -0.65
MCF2L-209ENST00000397036 ABCA2Q9BZC7 2435 aa11.01□□□□□ -0.65
MCF2L-209ENST00000397036 J3QLI3 93 aa11.01□□□□□ -0.65
MCF2L-209ENST00000397036 MPC2O95563 127 aa11.01□□□□□ -0.65
MCF2L-209ENST00000397036 HRASP01112 189 aa11.01□□□□□ -0.65
MCF2L-209ENST00000397036 PET100P0DJ07 73 aa11.01□□□□□ -0.65
MCF2L-209ENST00000397036 EIF2B2P49770 351 aaKnown RBP11.01□□□□□ -0.65
MCF2L-209ENST00000397036 AKR1C2P52895 323 aa11.01□□□□□ -0.65
MCF2L-209ENST00000397036 DLX1P56177 255 aa11.01□□□□□ -0.65
MCF2L-209ENST00000397036 ID3Q02535 119 aa11.01□□□□□ -0.65
MCF2L-209ENST00000397036 SMCO1Q147U7 214 aa11.01□□□□□ -0.65
MCF2L-209ENST00000397036 AARDQ4LEZ3 155 aa11.01□□□□□ -0.65
MCF2L-209ENST00000397036 CCDC144NLQ6NUI1 221 aa11.01□□□□□ -0.65
MCF2L-209ENST00000397036 C11orf87Q6NUJ2 197 aa11.01□□□□□ -0.65
MCF2L-209ENST00000397036 OR11H4Q8NGC9 324 aa11.01□□□□□ -0.65
MCF2L-209ENST00000397036 OR4C13Q8NGP0 309 aa11.01□□□□□ -0.65
MCF2L-209ENST00000397036 LHX4Q969G2 390 aa11.01□□□□□ -0.65
MCF2L-209ENST00000397036 WASHC3Q9Y3C0 194 aa11.01□□□□□ -0.65
MCF2L-209ENST00000397036 ITPR2Q14571 2701 aa11.01□□□□□ -0.65
MCF2L-209ENST00000397036 PRRC2AP48634 2157 aaKnown RBP11□□□□□ -0.65
MCF2L-209ENST00000397036 TRAV14DV4A0A0A6YYC5 116 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 IGHV1-3A0A0C4DH29 117 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 A0A0G2JRQ6 117 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 MARCH11A6NNE9 402 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 FAM90A26D6RGX4 464 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 KRASP01116 189 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 IL6RP08887 468 aaPredicted RBP11□□□□□ -0.65
MCF2L-209ENST00000397036 LGALS7P47929 136 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 ERVK-16P61578 105 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 DIAPH2-AS1Q14236 149 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 OR2B11Q5JQS5 317 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 LDLRAD2Q5SZI1 272 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 Q6ZRM9 215 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 R3HDM4Q96D70 268 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 MALSU1Q96EH3 234 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 Q96MF0 132 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 RNF126Q9BV68 326 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 HIF1ANQ9NWT6 349 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 GSKIPQ9P0R6 139 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 AUP1Q9Y679 476 aa11□□□□□ -0.65
MCF2L-209ENST00000397036 NBPF19A0A087WUL8 3843 aa10.99□□□□□ -0.65
MCF2L-209ENST00000397036 A0A1W2PPI3 338 aa10.99□□□□□ -0.65
MCF2L-209ENST00000397036 RNF223E7ERA6 249 aa10.99□□□□□ -0.65
MCF2L-209ENST00000397036 SMLR1H3BR10 107 aa10.99□□□□□ -0.65
MCF2L-209ENST00000397036 ST8SIA3O43173 380 aa10.99□□□□□ -0.65
MCF2L-209ENST00000397036 CRYZL1O95825 349 aa10.99□□□□□ -0.65
MCF2L-209ENST00000397036 RLN2P04090 185 aa10.99□□□□□ -0.65
MCF2L-209ENST00000397036 FGF2P09038 288 aa10.99□□□□□ -0.65
MCF2L-209ENST00000397036 CD1BP29016 333 aa10.99□□□□□ -0.65
MCF2L-209ENST00000397036 G6PCP35575 357 aa10.99□□□□□ -0.65
MCF2L-209ENST00000397036 LGALS4P56470 323 aa10.99□□□□□ -0.65
MCF2L-209ENST00000397036 KLRD1Q13241 179 aa10.99□□□□□ -0.65
MCF2L-209ENST00000397036 RAB32Q13637 225 aa10.99□□□□□ -0.65
MCF2L-209ENST00000397036 PRSS54Q6PEW0 395 aa10.99□□□□□ -0.65
MCF2L-209ENST00000397036 H2BFWTQ7Z2G1 175 aa10.99□□□□□ -0.65
MCF2L-209ENST00000397036 RNASE11Q8TAA1 199 aaKnown RBP10.99□□□□□ -0.65
MCF2L-209ENST00000397036 THAP6Q8TBB0 222 aa10.99□□□□□ -0.65
MCF2L-209ENST00000397036 FLYWCH2Q96CP2 140 aaKnown RBP10.99□□□□□ -0.65
MCF2L-209ENST00000397036 RHOVQ96L33 236 aa10.99□□□□□ -0.65
MCF2L-209ENST00000397036 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.99□□□□□ -0.65
MCF2L-209ENST00000397036 ASH1LQ9NR48 2969 aaKnown RBP10.99□□□□□ -0.65
MCF2L-209ENST00000397036 CENPVL3A0A0U1RRI6 287 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms