RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 VASH2Q86V25 355 aa11.15□□□□□ -0.63
TRIM40-207ENST00000396581 SCCPDHQ8NBX0 429 aa11.15□□□□□ -0.63
TRIM40-207ENST00000396581 MDS2Q8NDY4 140 aa11.15□□□□□ -0.63
TRIM40-207ENST00000396581 CHODLQ9H9P2 273 aa11.15□□□□□ -0.63
TRIM40-207ENST00000396581 NKX2-8O15522 239 aa11.14□□□□□ -0.63
TRIM40-207ENST00000396581 CLDN14O95500 239 aa11.14□□□□□ -0.63
TRIM40-207ENST00000396581 KRASP01116 189 aa11.14□□□□□ -0.63
TRIM40-207ENST00000396581 SPINK2P20155 84 aa11.14□□□□□ -0.63
TRIM40-207ENST00000396581 CDC34P49427 236 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-207ENST00000396581 ERVFC1-1P60608 527 aa11.14□□□□□ -0.63
TRIM40-207ENST00000396581 GNB1P62873 340 aa11.14□□□□□ -0.63
TRIM40-207ENST00000396581 SRYQ05066 204 aa11.14□□□□□ -0.63
TRIM40-207ENST00000396581 CLEC12BQ2HXU8 276 aa11.14□□□□□ -0.63
TRIM40-207ENST00000396581 WDYHV1Q96HA8 205 aa11.14□□□□□ -0.63
TRIM40-207ENST00000396581 HES7Q9BYE0 225 aa11.14□□□□□ -0.63
TRIM40-207ENST00000396581 KCNIP2Q9NS61 270 aa11.14□□□□□ -0.63
TRIM40-207ENST00000396581 ZNF407Q9C0G0 2248 aa11.14□□□□□ -0.63
TRIM40-207ENST00000396581 SH2D1BO14796 132 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 S1PR2O95136 353 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 SP1P08047 785 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 CELA3AP09093 270 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 PPP1CBP62140 327 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 TLE1Q04724 770 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 CATR1Q13166 79 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 USF2Q15853 346 aaPredicted RBP11.13□□□□□ -0.63
TRIM40-207ENST00000396581 AARDQ4LEZ3 155 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 ZNF766Q5HY98 468 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 TEX38Q6PEX7 206 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 NUFIP2Q7Z417 695 aaKnown RBP11.13□□□□□ -0.63
TRIM40-207ENST00000396581 MRPL41Q8IXM3 137 aaKnown RBP11.13□□□□□ -0.63
TRIM40-207ENST00000396581 ZNF709Q8N972 641 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 UBALD1Q8TB05 177 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 TXNDC17Q9BRA2 123 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 SNHG12Q9BXW3 62 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 HES4Q9HCC6 221 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 B4GALT7Q9UBV7 327 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 WDR83OSQ9Y284 106 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 TMEM210A6NLX4 147 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 F6UZH7 168 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 YPEL3P61236 119 aaPredicted RBP11.13□□□□□ -0.63
TRIM40-207ENST00000396581 SRSF6Q13247 344 aaKnown RBP11.13□□□□□ -0.63
TRIM40-207ENST00000396581 IGFBP7Q16270 282 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 FAM78BQ5VT40 261 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 WDR31Q8NA23 367 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 ZDHHC16Q969W1 377 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 TTTY12Q9BZ98 90 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 OR2D2Q9H210 308 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 FKBP11Q9NYL4 201 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 KLF13Q9Y2Y9 288 aaPredicted RBP11.13□□□□□ -0.63
TRIM40-207ENST00000396581 ZFHX4Q86UP3 3567 aa11.13□□□□□ -0.63
TRIM40-207ENST00000396581 LOC400499M0QZD8 3231 aa11.12□□□□□ -0.63
TRIM40-207ENST00000396581 KLRC4-KLRK1H3BQV0 150 aa11.12□□□□□ -0.63
TRIM40-207ENST00000396581 CHRNA7P36544 502 aa11.12□□□□□ -0.63
TRIM40-207ENST00000396581 PMP22Q01453 160 aa11.12□□□□□ -0.63
TRIM40-207ENST00000396581 ZNF816Q0VGE8 651 aaPredicted RBP11.12□□□□□ -0.63
TRIM40-207ENST00000396581 MRPL52Q86TS9 123 aaKnown RBP11.12□□□□□ -0.63
TRIM40-207ENST00000396581 MYPOPQ86VE0 399 aaPredicted RBP11.12□□□□□ -0.63
TRIM40-207ENST00000396581 BCL2L2Q92843 193 aaPredicted RBP11.12□□□□□ -0.63
TRIM40-207ENST00000396581 GALMQ96C23 342 aa11.12□□□□□ -0.63
TRIM40-207ENST00000396581 ELOVL5Q9NYP7 299 aa11.12□□□□□ -0.63
TRIM40-207ENST00000396581 KCNIP1Q9NZI2 227 aa11.12□□□□□ -0.63
TRIM40-207ENST00000396581 WASF3Q9UPY6 502 aa11.12□□□□□ -0.63
TRIM40-207ENST00000396581 POLR3KQ9Y2Y1 108 aaPredicted RBP11.12□□□□□ -0.63
TRIM40-207ENST00000396581 TRAPPC1Q9Y5R8 145 aa11.12□□□□□ -0.63
TRIM40-207ENST00000396581 SPTBN2O15020 2390 aa11.12□□□□□ -0.63
TRIM40-207ENST00000396581 FREM1Q5H8C1 2179 aa11.12□□□□□ -0.63
TRIM40-207ENST00000396581 TMEM30CPA0ZSE6 113 aa11.12□□□□□ -0.63
TRIM40-207ENST00000396581 C15orf62A8K5M9 175 aa11.12□□□□□ -0.63
TRIM40-207ENST00000396581 C17orf98A8MV24 154 aa11.12□□□□□ -0.63
TRIM40-207ENST00000396581 C12orf77C9JDV5 145 aa11.12□□□□□ -0.63
TRIM40-207ENST00000396581 WT1P19544 449 aaPredicted RBP11.12□□□□□ -0.63
TRIM40-207ENST00000396581 SELENOTP62341 195 aa11.12□□□□□ -0.63
TRIM40-207ENST00000396581 SLC35E4Q6ICL7 350 aa11.12□□□□□ -0.63
TRIM40-207ENST00000396581 PSPNO60542 156 aa11.11□□□□□ -0.63
TRIM40-207ENST00000396581 RAC2P15153 192 aa11.11□□□□□ -0.63
TRIM40-207ENST00000396581 CD46P15529 392 aa11.11□□□□□ -0.63
TRIM40-207ENST00000396581 RAB4AP20338 218 aa11.11□□□□□ -0.63
TRIM40-207ENST00000396581 OR3A1P47881 315 aa11.11□□□□□ -0.63
TRIM40-207ENST00000396581 UBE2NP61088 152 aaKnown RBP11.11□□□□□ -0.63
TRIM40-207ENST00000396581 TAAR6Q96RI8 345 aa11.11□□□□□ -0.63
TRIM40-207ENST00000396581 A0A0U1RQK1 487 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 ZNF320A2RRD8 509 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 OOEPA6NGQ2 149 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 NXPH2O95156 264 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 HAND1O96004 215 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 ESDP10768 282 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 OR10J1P30954 320 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 MAGEA5P43359 124 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 ATP5G3P48201 142 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 MDP1Q86V88 176 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 TMEM251Q8N6I4 163 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 NANOS1Q8WY41 292 aaKnown RBP11.1□□□□□ -0.63
TRIM40-207ENST00000396581 SFRP2Q96HF1 295 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 NAGKQ9UJ70 344 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 DNAJC13O75165 2243 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 URB1O60287 2271 aaKnown RBP11.1□□□□□ -0.63
TRIM40-207ENST00000396581 ZNF891A8MT65 544 aaPredicted RBP11.1□□□□□ -0.63
TRIM40-207ENST00000396581 M0R143 59 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 CDIPTO14735 213 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 RBFOX2O43251 390 aaKnown RBP eCLIP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms