RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 Q3ZCU0 254 aa13.09□□□□□ -0.31
HOXA3-202ENST00000396352 WDR82Q6UXN9 313 aa13.09□□□□□ -0.31
HOXA3-202ENST00000396352 GCNT2Q8N0V5 402 aa13.09□□□□□ -0.31
HOXA3-202ENST00000396352 QTRT1Q9BXR0 403 aaKnown RBP13.09□□□□□ -0.31
HOXA3-202ENST00000396352 ARRDC1-AS1Q9H2J1 176 aa13.09□□□□□ -0.31
HOXA3-202ENST00000396352 PRRC2CQ9Y520 2896 aaKnown RBP13.09□□□□□ -0.31
HOXA3-202ENST00000396352 CACNA1DQ01668 2161 aa13.09□□□□□ -0.31
HOXA3-202ENST00000396352 TSTD3H0UI37 97 aa13.09□□□□□ -0.31
HOXA3-202ENST00000396352 ST8SIA5O15466 376 aa13.09□□□□□ -0.31
HOXA3-202ENST00000396352 TYMSP04818 313 aa13.09□□□□□ -0.31
HOXA3-202ENST00000396352 TGFBR3Q03167 851 aa13.09□□□□□ -0.31
HOXA3-202ENST00000396352 ATP1A1-AS1Q5TC04 95 aa13.09□□□□□ -0.31
HOXA3-202ENST00000396352 PRAMEF6Q5VXH4 476 aa13.09□□□□□ -0.31
HOXA3-202ENST00000396352 REC114Q7Z4M0 266 aa13.09□□□□□ -0.31
HOXA3-202ENST00000396352 C17orf112F2Z3M2 114 aa13.08□□□□□ -0.31
HOXA3-202ENST00000396352 NUBP1P53384 320 aa13.08□□□□□ -0.31
HOXA3-202ENST00000396352 GCSAMLQ5JQS6 135 aa13.08□□□□□ -0.31
HOXA3-202ENST00000396352 ACY3Q96HD9 319 aa13.08□□□□□ -0.31
HOXA3-202ENST00000396352 HSD17B10Q99714 261 aaKnown RBP13.08□□□□□ -0.31
HOXA3-202ENST00000396352 ZNF891A8MT65 544 aaPredicted RBP13.08□□□□□ -0.32
HOXA3-202ENST00000396352 DEFB108AA8MXU0 73 aa13.08□□□□□ -0.32
HOXA3-202ENST00000396352 GALR2O43603 387 aaPredicted RBP13.08□□□□□ -0.32
HOXA3-202ENST00000396352 RBMXL2O75526 392 aaKnown RBP13.08□□□□□ -0.32
HOXA3-202ENST00000396352 IFNA10P01566 189 aa13.08□□□□□ -0.32
HOXA3-202ENST00000396352 SRP14P37108 136 aaKnown RBP13.08□□□□□ -0.32
HOXA3-202ENST00000396352 INO80CQ6PI98 192 aaPredicted RBP13.08□□□□□ -0.32
HOXA3-202ENST00000396352 OR2T10Q8NGZ9 312 aa13.08□□□□□ -0.32
HOXA3-202ENST00000396352 LURAP1Q96LR2 239 aa13.08□□□□□ -0.32
HOXA3-202ENST00000396352 PSG11Q9UQ72 335 aa13.08□□□□□ -0.32
HOXA3-202ENST00000396352 WDR83OSQ9Y284 106 aa13.08□□□□□ -0.32
HOXA3-202ENST00000396352 NBEAQ8NFP9 2946 aa13.08□□□□□ -0.32
HOXA3-202ENST00000396352 A0A087X0M5 115 aa13.08□□□□□ -0.32
HOXA3-202ENST00000396352 A0A1B0GX30 115 aa13.08□□□□□ -0.32
HOXA3-202ENST00000396352 OR9G9P0C7N8 305 aa13.08□□□□□ -0.32
HOXA3-202ENST00000396352 PRSS8Q16651 343 aa13.08□□□□□ -0.32
HOXA3-202ENST00000396352 ACOT6Q3I5F7 207 aaPredicted RBP13.08□□□□□ -0.32
HOXA3-202ENST00000396352 FER1L6-AS2Q96M78 137 aa13.08□□□□□ -0.32
HOXA3-202ENST00000396352 CXXC4Q9H2H0 198 aa13.08□□□□□ -0.32
HOXA3-202ENST00000396352 HCFC1P51610 2035 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 FOXF2Q12947 444 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 AARDQ4LEZ3 155 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 WDR31Q8NA23 367 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 RFESDQ8TAC1 157 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 OR6C3Q9NZP0 311 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 CLCF1Q9UBD9 225 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 FUT9Q9Y231 359 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 TRAV38-1A0A0B4J264 116 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.07□□□□□ -0.32
HOXA3-202ENST00000396352 MKRN2OSH3BPM6 223 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 C15orf65H3BRN8 121 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 PROP1O75360 226 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 GNB1P62873 340 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 LINC01551Q86U37 167 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 MEGF10Q96KG7 1140 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 DCTN5Q9BTE1 182 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 AGFG2O95081 481 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 IGKV3-15P01624 115 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 Q6ZT83 130 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 R3HDM4Q96D70 268 aa13.07□□□□□ -0.32
HOXA3-202ENST00000396352 TNFSF15O95150 251 aa13.06□□□□□ -0.32
HOXA3-202ENST00000396352 CRYAAP02489 173 aa13.06□□□□□ -0.32
HOXA3-202ENST00000396352 EGR1P18146 543 aa13.06□□□□□ -0.32
HOXA3-202ENST00000396352 BMP5P22003 454 aa13.06□□□□□ -0.32
HOXA3-202ENST00000396352 CD1BP29016 333 aa13.06□□□□□ -0.32
HOXA3-202ENST00000396352 ATP5G3P48201 142 aa13.06□□□□□ -0.32
HOXA3-202ENST00000396352 TMEM249Q2WGJ8 235 aa13.06□□□□□ -0.32
HOXA3-202ENST00000396352 RAB1CQ92928 201 aa13.06□□□□□ -0.32
HOXA3-202ENST00000396352 IFNL4K9M1U5 179 aa13.06□□□□□ -0.32
HOXA3-202ENST00000396352 TMPRSS2O15393 492 aa13.06□□□□□ -0.32
HOXA3-202ENST00000396352 CD59P13987 128 aa13.06□□□□□ -0.32
HOXA3-202ENST00000396352 CD82P27701 267 aa13.06□□□□□ -0.32
HOXA3-202ENST00000396352 ARG2P78540 354 aa13.06□□□□□ -0.32
HOXA3-202ENST00000396352 GUSBP1Q15486 140 aa13.06□□□□□ -0.32
HOXA3-202ENST00000396352 TMPRSS7Q7RTY8 843 aa13.06□□□□□ -0.32
HOXA3-202ENST00000396352 CISD2Q8N5K1 135 aaKnown RBP13.06□□□□□ -0.32
HOXA3-202ENST00000396352 TMEM37Q8WXS4 190 aa13.06□□□□□ -0.32
HOXA3-202ENST00000396352 DERL1Q9BUN8 251 aa13.06□□□□□ -0.32
HOXA3-202ENST00000396352 DSPP15924 2871 aaKnown RBP13.05□□□□□ -0.32
HOXA3-202ENST00000396352 PDE6DO43924 150 aa13.05□□□□□ -0.32
HOXA3-202ENST00000396352 CHRNA7P36544 502 aa13.05□□□□□ -0.32
HOXA3-202ENST00000396352 CD177Q8N6Q3 437 aa13.05□□□□□ -0.32
HOXA3-202ENST00000396352 Q8TCH9 128 aa13.05□□□□□ -0.32
HOXA3-202ENST00000396352 FZR1Q9UM11 496 aa13.05□□□□□ -0.32
HOXA3-202ENST00000396352 TET2Q6N021 2002 aaPredicted RBP13.05□□□□□ -0.32
HOXA3-202ENST00000396352 DUTP33316 252 aaKnown RBP13.05□□□□□ -0.32
HOXA3-202ENST00000396352 HTD2P86397 168 aa13.05□□□□□ -0.32
HOXA3-202ENST00000396352 FAM214BQ7L5A3 538 aa13.05□□□□□ -0.32
HOXA3-202ENST00000396352 OR5T1Q8NG75 326 aa13.05□□□□□ -0.32
HOXA3-202ENST00000396352 LOC400499M0QZD8 3231 aa13.05□□□□□ -0.32
HOXA3-202ENST00000396352 UBE2G2P60604 165 aa13.05□□□□□ -0.32
HOXA3-202ENST00000396352 TMEM144Q7Z5S9 345 aa13.05□□□□□ -0.32
HOXA3-202ENST00000396352 MSL2Q9HCI7 577 aa13.05□□□□□ -0.32
HOXA3-202ENST00000396352 CD99P14209 185 aa13.04□□□□□ -0.32
HOXA3-202ENST00000396352 KITLGP21583 273 aa13.04□□□□□ -0.32
HOXA3-202ENST00000396352 IL3RAP26951 378 aa13.04□□□□□ -0.32
HOXA3-202ENST00000396352 EDDM3BP56851 147 aa13.04□□□□□ -0.32
HOXA3-202ENST00000396352 LCN2P80188 198 aa13.04□□□□□ -0.32
HOXA3-202ENST00000396352 PAX5Q02548 391 aa13.04□□□□□ -0.32
HOXA3-202ENST00000396352 SMIM21Q3B7S5 101 aa13.04□□□□□ -0.32
HOXA3-202ENST00000396352 ZNF664Q8N3J9 261 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms