RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 TPSG1Q9NRR2 321 aa12.59□□□□□ -0.39
DDR1-229ENST00000396342 SDHAF2Q9NX18 166 aa12.59□□□□□ -0.39
DDR1-229ENST00000396342 TRBV6-7A0A0A0MS04 114 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 TRAV1-2A0A0B4J238 106 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 TMEM272A0A1B0GTI8 110 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 DPPA5A6NC42 116 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 MSGN1A6NI15 193 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 AIREO43918 545 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 SCGNO76038 276 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 IGLV1-51P01701 117 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 GSTT2P0CG29 244 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 GSTT2BP0CG30 244 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 IGHV4-30-4P0DP06 118 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 CD36P16671 472 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 RAB3BP20337 219 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 SYNJ2BPP57105 145 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 FABP5Q01469 135 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 ATP5G2Q06055 141 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 TMEM177Q53S58 311 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 IGSF11Q5DX21 431 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 PLAC9Q5JTB6 97 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 CASC10Q5T4H9 136 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 Q8N402 240 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 OSR1Q8TAX0 266 aaPredicted RBP12.58□□□□□ -0.4
DDR1-229ENST00000396342 CYYR1Q96J86 154 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 SPATA25Q9BR10 227 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 CABLES2Q9BTV7 478 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 ATG5Q9H1Y0 275 aa12.58□□□□□ -0.4
DDR1-229ENST00000396342 IGKV1-6A0A0C4DH72 117 aa12.57□□□□□ -0.4
DDR1-229ENST00000396342 FAM223BA6NKX1 122 aa12.57□□□□□ -0.4
DDR1-229ENST00000396342 IFITM5A6NNB3 132 aa12.57□□□□□ -0.4
DDR1-229ENST00000396342 FOXI3A8MTJ6 420 aaPredicted RBP12.57□□□□□ -0.4
DDR1-229ENST00000396342 BRI3O95415 125 aa12.57□□□□□ -0.4
DDR1-229ENST00000396342 CRYZL1O95825 349 aa12.57□□□□□ -0.4
DDR1-229ENST00000396342 OR9G9P0C7N8 305 aa12.57□□□□□ -0.4
DDR1-229ENST00000396342 HIST1H1DP16402 221 aaKnown RBP12.57□□□□□ -0.4
DDR1-229ENST00000396342 GNB3P16520 340 aa12.57□□□□□ -0.4
DDR1-229ENST00000396342 MAP2K4P45985 399 aa12.57□□□□□ -0.4
DDR1-229ENST00000396342 UBE2KP61086 200 aa12.57□□□□□ -0.4
DDR1-229ENST00000396342 SSX1Q16384 188 aa12.57□□□□□ -0.4
DDR1-229ENST00000396342 FAM223AQ8IWN6 122 aa12.57□□□□□ -0.4
DDR1-229ENST00000396342 OR2A4O95047 310 aa12.56□□□□□ -0.4
DDR1-229ENST00000396342 DHFRP00374 187 aa12.56□□□□□ -0.4
DDR1-229ENST00000396342 CRHBPP24387 322 aa12.56□□□□□ -0.4
DDR1-229ENST00000396342 KLF5Q13887 457 aaPredicted RBP12.56□□□□□ -0.4
DDR1-229ENST00000396342 TBCEQ15813 527 aaPredicted RBP12.56□□□□□ -0.4
DDR1-229ENST00000396342 MMD2Q8IY49 270 aa12.56□□□□□ -0.4
DDR1-229ENST00000396342 OR2K2Q8NGT1 345 aa12.56□□□□□ -0.4
DDR1-229ENST00000396342 IL17DQ8TAD2 202 aa12.56□□□□□ -0.4
DDR1-229ENST00000396342 VSTM2AQ8TAG5 236 aa12.56□□□□□ -0.4
DDR1-229ENST00000396342 DYNLRB2Q8TF09 96 aa12.56□□□□□ -0.4
DDR1-229ENST00000396342 CITED4Q96RK1 184 aa12.56□□□□□ -0.4
DDR1-229ENST00000396342 GFI1Q99684 422 aa12.56□□□□□ -0.4
DDR1-229ENST00000396342 PROP1O75360 226 aa12.55□□□□□ -0.4
DDR1-229ENST00000396342 DTYMKP23919 212 aa12.55□□□□□ -0.4
DDR1-229ENST00000396342 LINC00205P59089 165 aa12.55□□□□□ -0.4
DDR1-229ENST00000396342 PJVKQ0ZLH3 352 aa12.55□□□□□ -0.4
DDR1-229ENST00000396342 PRSS8Q16651 343 aa12.55□□□□□ -0.4
DDR1-229ENST00000396342 ZNF343Q6P1L6 599 aa12.55□□□□□ -0.4
DDR1-229ENST00000396342 HAPLN4Q86UW8 402 aa12.55□□□□□ -0.4
DDR1-229ENST00000396342 CNBD2Q96M20 576 aa12.55□□□□□ -0.4
DDR1-229ENST00000396342 AIFM2Q9BRQ8 373 aa12.55□□□□□ -0.4
DDR1-229ENST00000396342 ST6GALNAC5Q9BVH7 336 aa12.55□□□□□ -0.4
DDR1-229ENST00000396342 SLC2A8Q9NY64 477 aa12.55□□□□□ -0.4
DDR1-229ENST00000396342 ZNF230Q9UIE0 474 aaPredicted RBP12.55□□□□□ -0.4
DDR1-229ENST00000396342 A8MZ25 164 aa12.54□□□□□ -0.4
DDR1-229ENST00000396342 IGLV2-23P01705 113 aa12.54□□□□□ -0.4
DDR1-229ENST00000396342 APELAP0DMC3 54 aa12.54□□□□□ -0.4
DDR1-229ENST00000396342 GALP22466 123 aa12.54□□□□□ -0.4
DDR1-229ENST00000396342 RHOGP84095 191 aa12.54□□□□□ -0.4
DDR1-229ENST00000396342 EXOSC2Q13868 293 aaKnown RBP12.54□□□□□ -0.4
DDR1-229ENST00000396342 KCTD9Q7L273 389 aa12.54□□□□□ -0.4
DDR1-229ENST00000396342 SRSF12Q8WXF0 261 aaKnown RBP12.54□□□□□ -0.4
DDR1-229ENST00000396342 MAFIPQ8WZ33 124 aa12.54□□□□□ -0.4
DDR1-229ENST00000396342 TRDV1A0A1B0GX56 115 aa12.53□□□□□ -0.4
DDR1-229ENST00000396342 ANKRD65E5RJM6 399 aa12.53□□□□□ -0.4
DDR1-229ENST00000396342 MFNGO00587 321 aa12.53□□□□□ -0.4
DDR1-229ENST00000396342 TPPPO94811 219 aa12.53□□□□□ -0.4
DDR1-229ENST00000396342 DUTP33316 252 aaKnown RBP12.53□□□□□ -0.4
DDR1-229ENST00000396342 GNG2P59768 71 aa12.53□□□□□ -0.4
DDR1-229ENST00000396342 CDK10Q15131 360 aa12.53□□□□□ -0.4
DDR1-229ENST00000396342 CDNFQ49AH0 187 aa12.53□□□□□ -0.4
DDR1-229ENST00000396342 Q6ZS49 121 aa12.53□□□□□ -0.4
DDR1-229ENST00000396342 H1FOOQ8IZA3 346 aaPredicted RBP12.53□□□□□ -0.4
DDR1-229ENST00000396342 ZNF645Q8N7E2 425 aa12.53□□□□□ -0.4
DDR1-229ENST00000396342 NECAP1Q8NC96 275 aa12.53□□□□□ -0.4
DDR1-229ENST00000396342 KCTD12Q96CX2 325 aaKnown RBP12.53□□□□□ -0.4
DDR1-229ENST00000396342 TM2D3Q9BRN9 247 aa12.53□□□□□ -0.4
DDR1-229ENST00000396342 DCSTAMPQ9H295 470 aa12.53□□□□□ -0.4
DDR1-229ENST00000396342 Q9H521 79 aa12.53□□□□□ -0.4
DDR1-229ENST00000396342 NDUFB11Q9NX14 153 aa12.53□□□□□ -0.4
DDR1-229ENST00000396342 SIGLEC8Q9NYZ4 499 aa12.53□□□□□ -0.4
DDR1-229ENST00000396342 NKX1-2Q9UD57 310 aaPredicted RBP12.53□□□□□ -0.4
DDR1-229ENST00000396342 J3QRK9 145 aa12.52□□□□□ -0.41
DDR1-229ENST00000396342 FCGR3BO75015 233 aa12.52□□□□□ -0.41
DDR1-229ENST00000396342 CRYGBP07316 175 aa12.52□□□□□ -0.41
DDR1-229ENST00000396342 IZUMO2Q6UXV1 221 aa12.52□□□□□ -0.41
DDR1-229ENST00000396342 ADAD2Q8NCV1 583 aaKnown RBP12.52□□□□□ -0.41
DDR1-229ENST00000396342 OR4S2Q8NH73 311 aa12.52□□□□□ -0.41
DDR1-229ENST00000396342 HSD17B10Q99714 261 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms