RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 FRMD6-AS1P0C7T7 363 aa15.28■□□□□ 0.04
HERPUD2-202ENST00000396081 CD99P14209 185 aa15.28■□□□□ 0.04
HERPUD2-202ENST00000396081 RAC2P15153 192 aa15.28■□□□□ 0.04
HERPUD2-202ENST00000396081 GAGE1Q13065 139 aa15.28■□□□□ 0.04
HERPUD2-202ENST00000396081 TEX43Q6ZNM6 134 aa15.28■□□□□ 0.04
HERPUD2-202ENST00000396081 TUBG2Q9NRH3 451 aa15.28■□□□□ 0.04
HERPUD2-202ENST00000396081 C17orf98A8MV24 154 aa15.28■□□□□ 0.04
HERPUD2-202ENST00000396081 ANKRD39Q53RE8 183 aa15.28■□□□□ 0.04
HERPUD2-202ENST00000396081 DNAJC4Q9NNZ3 241 aa15.28■□□□□ 0.04
HERPUD2-202ENST00000396081 ARL14EPLP0DKL9 152 aa15.27■□□□□ 0.04
HERPUD2-202ENST00000396081 CEBPDP49716 269 aaPredicted RBP15.27■□□□□ 0.04
HERPUD2-202ENST00000396081 RAB7AP51149 207 aa15.27■□□□□ 0.04
HERPUD2-202ENST00000396081 MMDQ15546 238 aa15.27■□□□□ 0.04
HERPUD2-202ENST00000396081 SIGLECL1Q8N7X8 197 aa15.27■□□□□ 0.04
HERPUD2-202ENST00000396081 OR1L6Q8NGR2 347 aa15.27■□□□□ 0.04
HERPUD2-202ENST00000396081 TRAV34A0A0B4J273 112 aa15.27■□□□□ 0.03
HERPUD2-202ENST00000396081 PMS2P5A8MQ11 134 aa15.27■□□□□ 0.03
HERPUD2-202ENST00000396081 LINC00614P0C842 121 aa15.27■□□□□ 0.03
HERPUD2-202ENST00000396081 LINC00310P59036 64 aa15.27■□□□□ 0.03
HERPUD2-202ENST00000396081 PLP2Q04941 152 aa15.27■□□□□ 0.03
HERPUD2-202ENST00000396081 TRA2AQ13595 282 aaKnown RBP eCLIP15.27■□□□□ 0.03
HERPUD2-202ENST00000396081 COL5A1-AS1Q5SY13 56 aa15.27■□□□□ 0.03
HERPUD2-202ENST00000396081 LINC00596Q86U02 117 aa15.27■□□□□ 0.03
HERPUD2-202ENST00000396081 CIB3Q96Q77 187 aaPredicted RBP15.27■□□□□ 0.03
HERPUD2-202ENST00000396081 KCNIP2Q9NS61 270 aa15.27■□□□□ 0.03
HERPUD2-202ENST00000396081 FREM2Q5SZK8 3169 aa15.27■□□□□ 0.03
HERPUD2-202ENST00000396081 TMPRSS2O15393 492 aa15.26■□□□□ 0.03
HERPUD2-202ENST00000396081 YPEL1O60688 119 aa15.26■□□□□ 0.03
HERPUD2-202ENST00000396081 RANP62826 216 aaKnown RBP15.26■□□□□ 0.03
HERPUD2-202ENST00000396081 TUSC5Q8IXB3 177 aa15.26■□□□□ 0.03
HERPUD2-202ENST00000396081 OR52L2PQ8NGH6 319 aa15.26■□□□□ 0.03
HERPUD2-202ENST00000396081 YPEL2Q96QA6 119 aa15.26■□□□□ 0.03
HERPUD2-202ENST00000396081 VPS13AQ96RL7 3174 aa15.26■□□□□ 0.03
HERPUD2-202ENST00000396081 SNURFLB1AK76 121 aa15.26■□□□□ 0.03
HERPUD2-202ENST00000396081 NXPH2O95156 264 aa15.26■□□□□ 0.03
HERPUD2-202ENST00000396081 LHX2P50458 406 aa15.26■□□□□ 0.03
HERPUD2-202ENST00000396081 HLA-DRB5Q30154 266 aa15.26■□□□□ 0.03
HERPUD2-202ENST00000396081 Q6P435 159 aa15.26■□□□□ 0.03
HERPUD2-202ENST00000396081 FOXJ2Q9P0K8 574 aa15.26■□□□□ 0.03
HERPUD2-202ENST00000396081 CHRNB4P30926 498 aa15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 TIMP3P35625 211 aa15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 KIAA1644Q3SXP7 199 aa15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 PDLIM3Q53GG5 364 aaPredicted RBP15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 KCNIP1Q9NZI2 227 aa15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 LOC102723996A0A087X1L8 192 aa15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 CD1BP29016 333 aa15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 YPEL3P61236 119 aaPredicted RBP15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 MOB1BQ7L9L4 216 aa15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 AGBL5Q8NDL9 886 aa15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 QTRT1Q9BXR0 403 aaKnown RBP15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 DEPPQ9NTK1 212 aa15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 DIRC3C9JPN6 131 aa15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 IL6RP08887 468 aaPredicted RBP15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 PMCHP20382 165 aa15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 COL8A2P25067 703 aa15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 KRTCAP3Q53RY4 240 aa15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 ZNF497Q6ZNH5 498 aa15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 TXN2Q99757 166 aa15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 SH2D2AQ9NP31 389 aa15.25■□□□□ 0.03
HERPUD2-202ENST00000396081 ADAMTS20P59510 1910 aa15.24■□□□□ 0.03
HERPUD2-202ENST00000396081 OR5B21A6NL26 309 aa15.24■□□□□ 0.03
HERPUD2-202ENST00000396081 NPIPB11E5RHQ5 1161 aa15.24■□□□□ 0.03
HERPUD2-202ENST00000396081 OTX2P32243 289 aa15.24■□□□□ 0.03
HERPUD2-202ENST00000396081 SLC35B1P78383 322 aa15.24■□□□□ 0.03
HERPUD2-202ENST00000396081 CATR1Q13166 79 aa15.24■□□□□ 0.03
HERPUD2-202ENST00000396081 FBXL7Q9UJT9 491 aa15.24■□□□□ 0.03
HERPUD2-202ENST00000396081 RNF114Q9Y508 228 aa15.24■□□□□ 0.03
HERPUD2-202ENST00000396081 NCKAP5O14513 1909 aa15.24■□□□□ 0.03
HERPUD2-202ENST00000396081 CCL4P13236 92 aa15.24■□□□□ 0.03
HERPUD2-202ENST00000396081 ARL6IP6Q8N6S5 226 aa15.24■□□□□ 0.03
HERPUD2-202ENST00000396081 PLPPR2Q96GM1 343 aa15.24■□□□□ 0.03
HERPUD2-202ENST00000396081 WIPI2Q9Y4P8 454 aa15.24■□□□□ 0.03
HERPUD2-202ENST00000396081 IGHV3-43A0A0B4J1X8 118 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 CDIPTO14735 213 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 IGHEP01854 428 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 IGHV3-43DP0DP04 118 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 HTD2P86397 168 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 MIC13Q5XKP0 118 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 ZNF645Q8N7E2 425 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 NINJ1Q92982 152 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 ZNF586Q9NXT0 402 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 DEFB108AA8MXU0 73 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 J3QT63 122 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 KLF7O75840 302 aaPredicted RBP15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 AMTP48728 403 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 SUMO1P63165 101 aaKnown RBP15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 LTC4SQ16873 150 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 SSMEM1Q8WWF3 244 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 SH2D1BO14796 132 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 GRPP07492 148 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 HOXA4Q00056 320 aaPredicted RBP15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 SPATA45Q537H7 98 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 GALMQ96C23 342 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 WDR54Q9H977 334 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 MPC1Q9Y5U8 109 aa15.23■□□□□ 0.03
HERPUD2-202ENST00000396081 AQP7O14520 342 aa15.22■□□□□ 0.03
HERPUD2-202ENST00000396081 GNG10P50151 68 aa15.22■□□□□ 0.03
HERPUD2-202ENST00000396081 RFESDQ8TAC1 157 aa15.22■□□□□ 0.03
HERPUD2-202ENST00000396081 C5orf30Q96GV9 206 aa15.22■□□□□ 0.03
HERPUD2-202ENST00000396081 POM121L2Q96KW2 1035 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms