RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 LAMP3Q9UQV4 416 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 FAM90A26D6RGX4 464 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 PRH1P02810 166 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 DANCRP0C864 163 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 P0C879 139 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 ZNF134P52741 427 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 RPL39P5Q59GN2 51 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 TMEM182Q6ZP80 229 aaPredicted RBP10.04□□□□□ -0.8
ITGB1-202ENST00000396033 ISOC2Q96AB3 205 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 DIDO1Q9BTC0 2240 aaKnown RBP10.04□□□□□ -0.8
ITGB1-202ENST00000396033 PKDREJQ9NTG1 2253 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 SLC31A2O15432 143 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 CAMLGP49069 296 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 UBE2KP61086 200 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 ZNF616Q08AN1 781 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 FBXL19-AS1Q494R0 122 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 NCR3LG1Q68D85 454 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 H2BFWTQ7Z2G1 175 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 ATP5SQ99766 215 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 CHD8Q9HCK8 2581 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 NCOR2Q9Y618 2525 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 PPIAL4EA0A075B759 164 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 PPIAL4DF5H284 164 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 TMEM178BH3BS89 294 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 GPR37O15354 613 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 PPIAL4FP0DN26 164 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 ATP6V0CP27449 155 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 RAB7AP51149 207 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 TNFRSF9Q07011 255 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 UTF1Q5T230 341 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 BTNL8Q6UX41 500 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 CD300LFQ8TDQ1 290 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 ZCCHC14Q8WYQ9 949 aaKnown RBP10.03□□□□□ -0.8
ITGB1-202ENST00000396033 SCRT1Q9BWW7 348 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 SEC11CQ9BY50 192 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 TMEM106BQ9NUM4 274 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 PPIAL4AQ9Y536 164 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 TANC2Q9HCD6 1990 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 AGPAT2O15120 278 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 FCGR3BO75015 233 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 FBP1P09467 338 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 APOBEC3AP31941 199 aaPredicted RBP10.03□□□□□ -0.8
ITGB1-202ENST00000396033 TREM1Q9NP99 234 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 SLC25A10Q9UBX3 287 aaPredicted RBP10.03□□□□□ -0.8
ITGB1-202ENST00000396033 ZNF729A6NN14 1252 aaPredicted RBP10.03□□□□□ -0.8
ITGB1-202ENST00000396033 RAB29O14966 203 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 PROP1O75360 226 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 RBMXL2O75526 392 aaKnown RBP10.03□□□□□ -0.8
ITGB1-202ENST00000396033 C1QL1O75973 258 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 METTL15P1P0C7V9 234 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 RAB5CP51148 216 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 ADORA2A-AS1P86434 159 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 MIDNQ504T8 468 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 OR2G3Q8NGZ4 309 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 MS4A5Q9H3V2 200 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 RBKSQ9H477 322 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.03□□□□□ -0.8
ITGB1-202ENST00000396033 IDI2-AS1Q9NZ38 188 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 CACFD1Q9UGQ2 172 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 DSCAML1Q8TD84 2053 aa10.03□□□□□ -0.8
ITGB1-202ENST00000396033 MARCH11A6NNE9 402 aa10.02□□□□□ -0.8
ITGB1-202ENST00000396033 DFFBO76075 338 aa10.02□□□□□ -0.8
ITGB1-202ENST00000396033 PLAUP00749 431 aa10.02□□□□□ -0.8
ITGB1-202ENST00000396033 DAOP14920 347 aa10.02□□□□□ -0.8
ITGB1-202ENST00000396033 FHITP49789 147 aa10.02□□□□□ -0.8
ITGB1-202ENST00000396033 R3HDM4Q96D70 268 aa10.02□□□□□ -0.8
ITGB1-202ENST00000396033 RHOVQ96L33 236 aa10.02□□□□□ -0.8
ITGB1-202ENST00000396033 HSPB7Q9UBY9 170 aa10.02□□□□□ -0.8
ITGB1-202ENST00000396033 STRAPQ9Y3F4 350 aaKnown RBP10.02□□□□□ -0.8
ITGB1-202ENST00000396033 hADV38S2A0JD32 116 aa10.02□□□□□ -0.81
ITGB1-202ENST00000396033 TAS2R30P59541 319 aa10.02□□□□□ -0.81
ITGB1-202ENST00000396033 PYY3Q5JQD4 70 aa10.02□□□□□ -0.81
ITGB1-202ENST00000396033 SPANXN5Q5MJ07 72 aa10.02□□□□□ -0.81
ITGB1-202ENST00000396033 SLC25A24Q6NUK1 477 aa10.02□□□□□ -0.81
ITGB1-202ENST00000396033 RFNGQ9Y644 331 aa10.02□□□□□ -0.81
ITGB1-202ENST00000396033 KALRNO60229 2985 aa10.02□□□□□ -0.81
ITGB1-202ENST00000396033 B9A039 149 aa10.02□□□□□ -0.81
ITGB1-202ENST00000396033 DLL1O00548 723 aa10.02□□□□□ -0.81
ITGB1-202ENST00000396033 ITGB1BP1O14713 200 aa10.02□□□□□ -0.81
ITGB1-202ENST00000396033 CT45A1Q5HYN5 189 aa10.02□□□□□ -0.81
ITGB1-202ENST00000396033 PRAMEF5Q5TYX0 476 aa10.02□□□□□ -0.81
ITGB1-202ENST00000396033 CT45A3Q8NHU0 189 aa10.02□□□□□ -0.81
ITGB1-202ENST00000396033 C19orf12Q9NSK7 152 aa10.02□□□□□ -0.81
ITGB1-202ENST00000396033 TSPAN15O95858 294 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 GNG10P50151 68 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 RUNX1Q01196 453 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 LY6DQ14210 128 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 EFNB3Q15768 340 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 CA5BP1Q8WTZ4 195 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 CORO2AQ92828 525 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 CISD1Q9NZ45 108 aaKnown RBP10.01□□□□□ -0.81
ITGB1-202ENST00000396033 MED19A0JLT2 244 aaPredicted RBP10.01□□□□□ -0.81
ITGB1-202ENST00000396033 HPRT1P00492 218 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 IFNA5P01569 189 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 FAM213BQ8TBF2 198 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 GNPNAT1Q96EK6 184 aaPredicted RBP10.01□□□□□ -0.81
ITGB1-202ENST00000396033 LINC00312Q9Y6C7 94 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 SAA2-SAA4A0A096LPE2 208 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 A0A1B0GV90 55 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 hCG_1809904A0A1W2PP81 198 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms