RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 CDX4O14627 284 aaPredicted RBP14.75□□□□□ -0.05
SIN3A-203ENST00000394949 PRNTQ86SH4 94 aa14.75□□□□□ -0.05
SIN3A-203ENST00000394949 POLR2AP24928 1970 aaKnown RBP14.75□□□□□ -0.05
SIN3A-203ENST00000394949 DLL1O00548 723 aa14.75□□□□□ -0.05
SIN3A-203ENST00000394949 ZG16O60844 167 aa14.75□□□□□ -0.05
SIN3A-203ENST00000394949 MARCH11A6NNE9 402 aa14.75□□□□□ -0.05
SIN3A-203ENST00000394949 RNF224P0DH78 156 aa14.75□□□□□ -0.05
SIN3A-203ENST00000394949 FGF5P12034 268 aa14.75□□□□□ -0.05
SIN3A-203ENST00000394949 COMPP49747 757 aaPredicted RBP14.75□□□□□ -0.05
SIN3A-203ENST00000394949 KCNMB1Q16558 191 aa14.75□□□□□ -0.05
SIN3A-203ENST00000394949 TTTY12Q9BZ98 90 aa14.75□□□□□ -0.05
SIN3A-203ENST00000394949 ZNF430Q9H8G1 570 aaPredicted RBP14.75□□□□□ -0.05
SIN3A-203ENST00000394949 MYO16Q9Y6X6 1858 aa14.75□□□□□ -0.05
SIN3A-203ENST00000394949 ZNF735P0CB33 412 aa14.74□□□□□ -0.05
SIN3A-203ENST00000394949 UQCRFS1P47985 274 aa14.74□□□□□ -0.05
SIN3A-203ENST00000394949 TCTAP57738 103 aa14.74□□□□□ -0.05
SIN3A-203ENST00000394949 FAM222BQ8WU58 562 aa14.74□□□□□ -0.05
SIN3A-203ENST00000394949 COLQQ9Y215 455 aaPredicted RBP14.74□□□□□ -0.05
SIN3A-203ENST00000394949 K7N7A8 449 aa14.74□□□□□ -0.05
SIN3A-203ENST00000394949 ERVFRD-1P60508 538 aa14.74□□□□□ -0.05
SIN3A-203ENST00000394949 OR10AG1Q8NH19 301 aa14.74□□□□□ -0.05
SIN3A-203ENST00000394949 MRPL32Q9BYC8 188 aaKnown RBP14.74□□□□□ -0.05
SIN3A-203ENST00000394949 TMEM140Q9NV12 185 aa14.74□□□□□ -0.05
SIN3A-203ENST00000394949 AUP1Q9Y679 476 aa14.74□□□□□ -0.05
SIN3A-203ENST00000394949 HOXA4Q00056 320 aaPredicted RBP14.74□□□□□ -0.05
SIN3A-203ENST00000394949 MIEN1Q9BRT3 115 aa14.74□□□□□ -0.05
SIN3A-203ENST00000394949 IL36BQ9NZH7 164 aa14.74□□□□□ -0.05
SIN3A-203ENST00000394949 ZNF638Q14966 1978 aaKnown RBP14.74□□□□□ -0.05
SIN3A-203ENST00000394949 TMEM189A5PLL7 270 aa14.74□□□□□ -0.05
SIN3A-203ENST00000394949 OR4C46A6NHA9 309 aa14.74□□□□□ -0.05
SIN3A-203ENST00000394949 FBLL1A6NHQ2 334 aaKnown RBP14.74□□□□□ -0.05
SIN3A-203ENST00000394949 P2RY6Q15077 328 aa14.74□□□□□ -0.05
SIN3A-203ENST00000394949 FGF11Q92914 225 aa14.74□□□□□ -0.05
SIN3A-203ENST00000394949 GCHFRP30047 84 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 GAS1P54826 345 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 CALHM1Q8IU99 346 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 CBLN1P23435 193 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 CRYBB3P26998 211 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 REG4Q9BYZ8 158 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 DNAJC4Q9NNZ3 241 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 INSIG2Q9Y5U4 225 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 EP300Q09472 2414 aaPredicted RBP14.73□□□□□ -0.05
SIN3A-203ENST00000394949 MPV17P39210 176 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 STARD6P59095 220 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 STPG1Q5TH74 334 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 DMRTA1Q5VZB9 504 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 CACNA1EQ15878 2313 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 RAMP1O60894 148 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 LGALS7P47929 136 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 NUBP1P53384 320 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 TMEM170AQ8WVE7 144 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 GUCD1Q96NT3 240 aa14.73□□□□□ -0.05
SIN3A-203ENST00000394949 PGPA6NDG6 321 aa14.72□□□□□ -0.05
SIN3A-203ENST00000394949 AGFG2O95081 481 aa14.72□□□□□ -0.05
SIN3A-203ENST00000394949 GREB1LQ9C091 1923 aaPredicted RBP14.72□□□□□ -0.05
SIN3A-203ENST00000394949 CD5P06127 495 aa14.72□□□□□ -0.05
SIN3A-203ENST00000394949 LIPFP07098 398 aa14.72□□□□□ -0.05
SIN3A-203ENST00000394949 FXYD3Q14802 87 aa14.72□□□□□ -0.05
SIN3A-203ENST00000394949 KIAA1644Q3SXP7 199 aa14.72□□□□□ -0.05
SIN3A-203ENST00000394949 SLC25A45Q8N413 288 aa14.72□□□□□ -0.05
SIN3A-203ENST00000394949 DNASE2BQ8WZ79 361 aa14.72□□□□□ -0.05
SIN3A-203ENST00000394949 SPTBN2O15020 2390 aa14.72□□□□□ -0.05
SIN3A-203ENST00000394949 COLCA2A8K830 154 aa14.72□□□□□ -0.05
SIN3A-203ENST00000394949 FAM157AC9JC47 383 aa14.72□□□□□ -0.05
SIN3A-203ENST00000394949 S1PR2O95136 353 aa14.72□□□□□ -0.05
SIN3A-203ENST00000394949 IGKV3-11P04433 115 aa14.72□□□□□ -0.05
SIN3A-203ENST00000394949 CD40P25942 277 aa14.72□□□□□ -0.05
SIN3A-203ENST00000394949 C1QL4Q86Z23 238 aa14.72□□□□□ -0.05
SIN3A-203ENST00000394949 ZNF441Q8N8Z8 693 aa14.72□□□□□ -0.05
SIN3A-203ENST00000394949 SRSF3P84103 164 aaKnown RBP14.71□□□□□ -0.05
SIN3A-203ENST00000394949 COL4A5P29400 1685 aa14.71□□□□□ -0.05
SIN3A-203ENST00000394949 MC5RP33032 325 aa14.71□□□□□ -0.05
SIN3A-203ENST00000394949 JOSD1Q15040 202 aaPredicted RBP14.71□□□□□ -0.05
SIN3A-203ENST00000394949 RTTNQ86VV8 2226 aa14.71□□□□□ -0.05
SIN3A-203ENST00000394949 LOC389332A0A1B0GUA5 103 aa14.71□□□□□ -0.05
SIN3A-203ENST00000394949 H3BVH4 76 aa14.71□□□□□ -0.05
SIN3A-203ENST00000394949 HEPN1Q6WQI6 88 aa14.71□□□□□ -0.05
SIN3A-203ENST00000394949 FAM214BQ7L5A3 538 aa14.71□□□□□ -0.05
SIN3A-203ENST00000394949 GATAD1Q8WUU5 269 aa14.71□□□□□ -0.05
SIN3A-203ENST00000394949 TMEM54Q969K7 222 aa14.71□□□□□ -0.05
SIN3A-203ENST00000394949 HSPB7Q9UBY9 170 aa14.71□□□□□ -0.05
SIN3A-203ENST00000394949 CKS2P33552 79 aa14.71□□□□□ -0.06
SIN3A-203ENST00000394949 UCP2P55851 309 aa14.71□□□□□ -0.06
SIN3A-203ENST00000394949 RPS20P60866 119 aaKnown RBP14.71□□□□□ -0.06
SIN3A-203ENST00000394949 GPHA2Q96T91 129 aa14.71□□□□□ -0.06
SIN3A-203ENST00000394949 JPT1Q9UK76 154 aa14.71□□□□□ -0.06
SIN3A-203ENST00000394949 TCF19Q9Y242 345 aa14.71□□□□□ -0.06
SIN3A-203ENST00000394949 RBBP6Q7Z6E9 1792 aaKnown RBP14.71□□□□□ -0.06
SIN3A-203ENST00000394949 F2RL2O00254 374 aa14.7□□□□□ -0.06
SIN3A-203ENST00000394949 HIST1H2BKO60814 126 aa14.7□□□□□ -0.06
SIN3A-203ENST00000394949 HIST1H2BJP06899 126 aa14.7□□□□□ -0.06
SIN3A-203ENST00000394949 HIST1H2BOP23527 126 aa14.7□□□□□ -0.06
SIN3A-203ENST00000394949 HIST1H2BBP33778 126 aa14.7□□□□□ -0.06
SIN3A-203ENST00000394949 RPL27AP46776 148 aaKnown RBP14.7□□□□□ -0.06
SIN3A-203ENST00000394949 HIST1H2BDP58876 126 aa14.7□□□□□ -0.06
SIN3A-203ENST00000394949 HIST1H2BCP62807 126 aa14.7□□□□□ -0.06
SIN3A-203ENST00000394949 RPL8P62917 257 aaKnown RBP14.7□□□□□ -0.06
SIN3A-203ENST00000394949 HIST2H2BEQ16778 126 aa14.7□□□□□ -0.06
SIN3A-203ENST00000394949 KRTCAP3Q53RY4 240 aa14.7□□□□□ -0.06
SIN3A-203ENST00000394949 TMEM177Q53S58 311 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms