RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 TRBV7-9A0A0J9YWB2 115 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 APOBEC3AP31941 199 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-205ENST00000394768 MSL2Q9HCI7 577 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 CYB5R3P00387 301 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-205ENST00000394768 IGHV3-13P01766 116 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 IGHV3-7P01780 117 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 YAE1D1Q9NRH1 226 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 IDI2-AS1Q9NZ38 188 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 JPT1Q9UK76 154 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 GVINP1Q7Z2Y8 2422 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 IL6RP08887 468 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-205ENST00000394768 HIST1H2BAQ96A08 127 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 KCNS1Q96KK3 526 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 COL6A6A6NMZ7 2263 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 TRGV2A0A075B6R0 118 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 PSG2P11465 335 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 FCARP24071 287 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 FAM74A4Q5TZK3 123 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 DUX3Q96PT4 197 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 BOLA1Q9Y3E2 137 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 DOCK10Q96BY6 2186 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 FCGR2BP31994 310 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-205ENST00000394768 UBE2V2Q15819 145 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 C1QTNF12Q5T7M4 302 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 COL11A1P12107 1806 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-205ENST00000394768 IGHV1-69-2A0A0G2JMI3 117 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 ERVK11-1P61568 191 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 VAX1Q5SQQ9 334 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 HOGA1Q86XE5 327 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 OR2K2Q8NGT1 345 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 SPTAN1Q13813 2472 aaKnown RBP6.44□□□□□ -1.38
SYNE2-205ENST00000394768 IGKV3D-15A0A087WSY6 115 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 H3BQ15 152 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 IGKV3-15P01624 115 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 DSCR9P59020 149 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 ZP4Q12836 540 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 MRPL16Q9NX20 251 aaKnown RBP6.44□□□□□ -1.38
SYNE2-205ENST00000394768 C19orf67A6NJJ6 358 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 CISD3P0C7P0 127 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 SLC25A34Q6PIV7 304 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 OR4D5Q8NGN0 318 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 TDGF1P13385 188 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 MUC1P15941 1255 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-205ENST00000394768 HOXA5P20719 270 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 SRSF5Q13243 272 aaKnown RBP6.44□□□□□ -1.38
SYNE2-205ENST00000394768 FAM169BQ8N8A8 192 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 CCL28Q9NRJ3 127 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 TMEM74BQ9NUR3 256 aa6.44□□□□□ -1.38
SYNE2-205ENST00000394768 C1QTNF9BB2RNN3 333 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 FCGR3AP08637 254 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 GPX4P36969 197 aaPredicted RBP6.43□□□□□ -1.38
SYNE2-205ENST00000394768 RPS11P62280 158 aaKnown RBP eCLIP6.43□□□□□ -1.38
SYNE2-205ENST00000394768 PMS2CLQ68D20 193 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 RNF167Q9H6Y7 350 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 SEMA5BQ9P283 1151 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 TMSB15BA0A087X1C1 80 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 IGHV4-34P06331 123 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.43□□□□□ -1.38
SYNE2-205ENST00000394768 OPN3Q9H1Y3 402 aaPredicted RBP6.43□□□□□ -1.38
SYNE2-205ENST00000394768 CRYBB2P43320 205 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 NPBWR2P48146 333 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 PSG6Q00889 435 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 SLC25A53Q5H9E4 307 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 KIAA2026Q5HYC2 2103 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 AMER3Q8N944 861 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 RHOVQ96L33 236 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 OVOL2Q9BRP0 275 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 TMEM222Q9H0R3 208 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 MRM2Q9UI43 246 aaKnown RBP6.43□□□□□ -1.38
SYNE2-205ENST00000394768 IGHV3OR15-7A0A075B7D8 119 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 ODAMA1E959 279 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 MARCH11A6NNE9 402 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 SNRPEP62304 92 aaKnown RBP6.43□□□□□ -1.38
SYNE2-205ENST00000394768 PAM16Q9Y3D7 125 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 DOCK6Q96HP0 2047 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 IGKV3D-11A0A0A0MRZ8 115 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 IGKV3-11P04433 115 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 ISG15P05161 165 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 OR51M1Q9H341 326 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 APELAP0DMC3 54 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 ST3GAL2Q16842 350 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 ZIC4Q8N9L1 334 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 FAM216AQ8WUB2 273 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 RPRMQ9NS64 109 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 TREM2Q9NZC2 230 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 FREM3P0C091 2139 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 REG1BP48304 166 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 HBBP68871 147 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 NRN1LQ496H8 165 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 SSBP3Q9BWW4 388 aaPredicted RBP6.43□□□□□ -1.38
SYNE2-205ENST00000394768 SHANK3Q9BYB0 1731 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 DOCK11Q5JSL3 2073 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 PRR19A6NJB7 356 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 C8orf88P0DMB2 117 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 LEPP41159 167 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 LINC01559Q495D7 138 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 FMC1Q96HJ9 113 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 CCL13Q99616 98 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 PKIGQ9Y2B9 76 aa6.43□□□□□ -1.38
SYNE2-205ENST00000394768 ZNF831Q5JPB2 1677 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms