RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 LSM5Q9Y4Y9 91 aaKnown RBP16.51■□□□□ 0.23
HDDC3-202ENST00000394272 POMT1Q9Y6A1 747 aa16.51■□□□□ 0.23
HDDC3-202ENST00000394272 ST8SIA3O43173 380 aa16.5■□□□□ 0.23
HDDC3-202ENST00000394272 COX7A1P24310 79 aa16.5■□□□□ 0.23
HDDC3-202ENST00000394272 NKX2-1P43699 371 aaPredicted RBP16.5■□□□□ 0.23
HDDC3-202ENST00000394272 IFITM2Q01629 132 aa16.5■□□□□ 0.23
HDDC3-202ENST00000394272 ID3Q02535 119 aa16.5■□□□□ 0.23
HDDC3-202ENST00000394272 CXorf66Q5JRM2 361 aaPredicted RBP16.5■□□□□ 0.23
HDDC3-202ENST00000394272 OR13D1Q8NGV5 346 aa16.5■□□□□ 0.23
HDDC3-202ENST00000394272 DCUN1D4Q92564 292 aa16.5■□□□□ 0.23
HDDC3-202ENST00000394272 COA4Q9NYJ1 87 aa16.5■□□□□ 0.23
HDDC3-202ENST00000394272 MARCH11A6NNE9 402 aa16.5■□□□□ 0.23
HDDC3-202ENST00000394272 FAM157AC9JC47 383 aa16.5■□□□□ 0.23
HDDC3-202ENST00000394272 IL3RAP26951 378 aa16.5■□□□□ 0.23
HDDC3-202ENST00000394272 ZNF345Q14585 488 aa16.5■□□□□ 0.23
HDDC3-202ENST00000394272 ACOT7LQ6ZUV0 252 aa16.5■□□□□ 0.23
HDDC3-202ENST00000394272 PNKDQ8N490 385 aa16.5■□□□□ 0.23
HDDC3-202ENST00000394272 OR11H6Q8NGC7 330 aa16.5■□□□□ 0.23
HDDC3-202ENST00000394272 OR4P4Q8NGL7 312 aa16.5■□□□□ 0.23
HDDC3-202ENST00000394272 R3HDM4Q96D70 268 aa16.5■□□□□ 0.23
HDDC3-202ENST00000394272 RCL1Q9Y2P8 373 aaKnown RBP16.5■□□□□ 0.23
HDDC3-202ENST00000394272 BUB1B-PAK6H3BSN5 160 aa16.49■□□□□ 0.23
HDDC3-202ENST00000394272 RLN2P04090 185 aa16.49■□□□□ 0.23
HDDC3-202ENST00000394272 REG1BP48304 166 aa16.49■□□□□ 0.23
HDDC3-202ENST00000394272 MIDNQ504T8 468 aa16.49■□□□□ 0.23
HDDC3-202ENST00000394272 HCP5Q6MZN7 132 aa16.49■□□□□ 0.23
HDDC3-202ENST00000394272 OR5AN1Q8NGI8 311 aa16.49■□□□□ 0.23
HDDC3-202ENST00000394272 NABP2Q9BQ15 211 aa16.49■□□□□ 0.23
HDDC3-202ENST00000394272 SIRPDQ9H106 197 aa16.49■□□□□ 0.23
HDDC3-202ENST00000394272 KCNAB3O43448 404 aa16.48■□□□□ 0.23
HDDC3-202ENST00000394272 OR2F2O95006 317 aa16.48■□□□□ 0.23
HDDC3-202ENST00000394272 CRYZL1O95825 349 aa16.48■□□□□ 0.23
HDDC3-202ENST00000394272 S100A11P31949 105 aa16.48■□□□□ 0.23
HDDC3-202ENST00000394272 OR2F1Q13607 317 aa16.48■□□□□ 0.23
HDDC3-202ENST00000394272 TMUB2Q71RG4 321 aa16.48■□□□□ 0.23
HDDC3-202ENST00000394272 DMBX1Q8NFW5 382 aa16.48■□□□□ 0.23
HDDC3-202ENST00000394272 C11orf1Q9H5F2 150 aa16.48■□□□□ 0.23
HDDC3-202ENST00000394272 SLC35D1Q9NTN3 355 aa16.48■□□□□ 0.23
HDDC3-202ENST00000394272 BEX4Q9NWD9 120 aaPredicted RBP16.48■□□□□ 0.23
HDDC3-202ENST00000394272 APCP25054 2843 aa16.48■□□□□ 0.23
HDDC3-202ENST00000394272 H0YJW9 148 aa16.48■□□□□ 0.23
HDDC3-202ENST00000394272 NQO2P16083 231 aa16.48■□□□□ 0.23
HDDC3-202ENST00000394272 TAGLNQ01995 201 aaKnown RBP16.48■□□□□ 0.23
HDDC3-202ENST00000394272 CLEC12BQ2HXU8 276 aa16.48■□□□□ 0.23
HDDC3-202ENST00000394272 VMO1Q7Z5L0 202 aa16.48■□□□□ 0.23
HDDC3-202ENST00000394272 TGIF2LXQ8IUE1 241 aa16.48■□□□□ 0.23
HDDC3-202ENST00000394272 GON7Q9BXV9 100 aa16.48■□□□□ 0.23
HDDC3-202ENST00000394272 A0A0D9SG52 128 aa16.47■□□□□ 0.23
HDDC3-202ENST00000394272 E5RGE8 158 aa16.47■□□□□ 0.23
HDDC3-202ENST00000394272 MMP9P14780 707 aa16.47■□□□□ 0.23
HDDC3-202ENST00000394272 AP2S1P53680 142 aaPredicted RBP16.47■□□□□ 0.23
HDDC3-202ENST00000394272 POLR2GP62487 172 aaKnown RBP eCLIP16.47■□□□□ 0.23
HDDC3-202ENST00000394272 OPCMLQ14982 345 aa16.47■□□□□ 0.23
HDDC3-202ENST00000394272 RTL8BQ17RB0 113 aa16.47■□□□□ 0.23
HDDC3-202ENST00000394272 DHRS7BQ6IAN0 325 aaPredicted RBP16.47■□□□□ 0.23
HDDC3-202ENST00000394272 H2BFWTQ7Z2G1 175 aa16.47■□□□□ 0.23
HDDC3-202ENST00000394272 KCNRGQ8N5I3 272 aa16.47■□□□□ 0.23
HDDC3-202ENST00000394272 INO80EQ8NBZ0 244 aaPredicted RBP16.47■□□□□ 0.23
HDDC3-202ENST00000394272 PCGF1Q9BSM1 259 aa16.47■□□□□ 0.23
HDDC3-202ENST00000394272 ARL6Q9H0F7 186 aa16.47■□□□□ 0.23
HDDC3-202ENST00000394272 HEXA-AS1Q9H8Q6 139 aa16.47■□□□□ 0.23
HDDC3-202ENST00000394272 NSG2Q9Y328 171 aa16.47■□□□□ 0.23
HDDC3-202ENST00000394272 AMMECR1Q9Y4X0 333 aaPredicted RBP16.47■□□□□ 0.23
HDDC3-202ENST00000394272 SVEP1Q4LDE5 3571 aa16.46■□□□□ 0.23
HDDC3-202ENST00000394272 NAV2Q8IVL1 2488 aa16.46■□□□□ 0.23
HDDC3-202ENST00000394272 MSGN1A6NI15 193 aa16.46■□□□□ 0.23
HDDC3-202ENST00000394272 ODF3BA8MYP8 253 aa16.46■□□□□ 0.23
HDDC3-202ENST00000394272 IGKV1-16P04430 117 aa16.46■□□□□ 0.23
HDDC3-202ENST00000394272 KLRD1Q13241 179 aa16.46■□□□□ 0.23
HDDC3-202ENST00000394272 HIST2H2BCQ6DN03 193 aa16.46■□□□□ 0.23
HDDC3-202ENST00000394272 AQP10Q96PS8 301 aa16.46■□□□□ 0.23
HDDC3-202ENST00000394272 LY6LH3BQJ8 138 aa16.46■□□□□ 0.22
HDDC3-202ENST00000394272 APOA2P02652 100 aa16.46■□□□□ 0.22
HDDC3-202ENST00000394272 RRASP10301 218 aa16.46■□□□□ 0.22
HDDC3-202ENST00000394272 SLC25A16P16260 332 aa16.46■□□□□ 0.22
HDDC3-202ENST00000394272 C4BPBP20851 252 aa16.46■□□□□ 0.22
HDDC3-202ENST00000394272 POU2AF1Q16633 256 aa16.46■□□□□ 0.22
HDDC3-202ENST00000394272 DEFB113Q30KQ7 82 aa16.46■□□□□ 0.22
HDDC3-202ENST00000394272 LRRC75A-AS1Q8N1F1 130 aa16.46■□□□□ 0.22
HDDC3-202ENST00000394272 RBMXL1Q96E39 390 aaKnown RBP16.46■□□□□ 0.22
HDDC3-202ENST00000394272 MAGT1Q9H0U3 335 aa16.46■□□□□ 0.22
HDDC3-202ENST00000394272 FAM90A9PA6NNJ1 464 aa16.45■□□□□ 0.22
HDDC3-202ENST00000394272 NXPH3O95157 252 aa16.45■□□□□ 0.22
HDDC3-202ENST00000394272 ARHGDIBP52566 201 aa16.45■□□□□ 0.22
HDDC3-202ENST00000394272 DVL1P1P54792 670 aaPredicted RBP16.45■□□□□ 0.22
HDDC3-202ENST00000394272 LDLRAD2Q5SZI1 272 aa16.45■□□□□ 0.22
HDDC3-202ENST00000394272 VKORC1L1Q8N0U8 176 aa16.45■□□□□ 0.22
HDDC3-202ENST00000394272 SLA2Q9H6Q3 261 aa16.45■□□□□ 0.22
HDDC3-202ENST00000394272 FAM90A26D6RGX4 464 aa16.44■□□□□ 0.22
HDDC3-202ENST00000394272 TSC22D2O75157 780 aa16.44■□□□□ 0.22
HDDC3-202ENST00000394272 ARG1P05089 322 aa16.44■□□□□ 0.22
HDDC3-202ENST00000394272 OR9G9P0C7N8 305 aa16.44■□□□□ 0.22
HDDC3-202ENST00000394272 HKR1P10072 659 aa16.44■□□□□ 0.22
HDDC3-202ENST00000394272 HOXB4P17483 251 aaPredicted RBP16.44■□□□□ 0.22
HDDC3-202ENST00000394272 ERVK-16P61578 105 aa16.44■□□□□ 0.22
HDDC3-202ENST00000394272 SSX9Q7RTT3 188 aa16.44■□□□□ 0.22
HDDC3-202ENST00000394272 LPAR2Q9HBW0 351 aa16.44■□□□□ 0.22
HDDC3-202ENST00000394272 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.44■□□□□ 0.22
HDDC3-202ENST00000394272 GCN1Q92616 2671 aaKnown RBP16.44■□□□□ 0.22
HDDC3-202ENST00000394272 RNASEK-C17orf49H0YIS7 233 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms