RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 PRH1P02810 166 aa11.55□□□□□ -0.56
CHMP3-202ENST00000393773 RHOGP84095 191 aa11.55□□□□□ -0.56
CHMP3-202ENST00000393773 DEFB114Q30KQ6 69 aa11.55□□□□□ -0.56
CHMP3-202ENST00000393773 AHSA2Q719I0 299 aa11.55□□□□□ -0.56
CHMP3-202ENST00000393773 NANOGP1Q8N7R0 232 aa11.55□□□□□ -0.56
CHMP3-202ENST00000393773 DYNLRB2Q8TF09 96 aa11.55□□□□□ -0.56
CHMP3-202ENST00000393773 GFI1Q99684 422 aa11.55□□□□□ -0.56
CHMP3-202ENST00000393773 CABLES2Q9BTV7 478 aa11.55□□□□□ -0.56
CHMP3-202ENST00000393773 PSORS1C1Q9UIG5 152 aa11.55□□□□□ -0.56
CHMP3-202ENST00000393773 DMRT1Q9Y5R6 373 aa11.55□□□□□ -0.56
CHMP3-202ENST00000393773 VPS13DQ5THJ4 4388 aa11.55□□□□□ -0.56
CHMP3-202ENST00000393773 MSGN1A6NI15 193 aa11.54□□□□□ -0.56
CHMP3-202ENST00000393773 C2orf70A6NJV1 201 aa11.54□□□□□ -0.56
CHMP3-202ENST00000393773 TRDCB7Z8K6 153 aa11.54□□□□□ -0.56
CHMP3-202ENST00000393773 SHOXO15266 292 aa11.54□□□□□ -0.56
CHMP3-202ENST00000393773 CD3GP09693 182 aa11.54□□□□□ -0.56
CHMP3-202ENST00000393773 TMEM50BP56557 158 aa11.54□□□□□ -0.56
CHMP3-202ENST00000393773 P2RY14Q15391 338 aa11.54□□□□□ -0.56
CHMP3-202ENST00000393773 TNXAQ16473 311 aa11.54□□□□□ -0.56
CHMP3-202ENST00000393773 PRSS8Q16651 343 aa11.54□□□□□ -0.56
CHMP3-202ENST00000393773 IDO2Q6ZQW0 420 aa11.54□□□□□ -0.56
CHMP3-202ENST00000393773 DDB2Q92466 427 aa11.54□□□□□ -0.56
CHMP3-202ENST00000393773 WDR89Q96FK6 387 aaPredicted RBP11.54□□□□□ -0.56
CHMP3-202ENST00000393773 ARHGAP5-AS1Q96IT6 56 aa11.54□□□□□ -0.56
CHMP3-202ENST00000393773 URM1Q9BTM9 101 aaKnown RBP11.54□□□□□ -0.56
CHMP3-202ENST00000393773 PECRQ9BY49 303 aa11.54□□□□□ -0.56
CHMP3-202ENST00000393773 FKBP14Q9NWM8 211 aa11.54□□□□□ -0.56
CHMP3-202ENST00000393773 UCHL1P09936 223 aa11.53□□□□□ -0.56
CHMP3-202ENST00000393773 SERPINB10P48595 397 aa11.53□□□□□ -0.56
CHMP3-202ENST00000393773 UBE2KP61086 200 aa11.53□□□□□ -0.56
CHMP3-202ENST00000393773 RTL8BQ17RB0 113 aa11.53□□□□□ -0.56
CHMP3-202ENST00000393773 PLAC9Q5JTB6 97 aa11.53□□□□□ -0.56
CHMP3-202ENST00000393773 CEACAM19Q7Z692 300 aa11.53□□□□□ -0.56
CHMP3-202ENST00000393773 C10orf67Q8IYJ2 551 aa11.53□□□□□ -0.56
CHMP3-202ENST00000393773 MS4A15Q8N5U1 240 aa11.53□□□□□ -0.56
CHMP3-202ENST00000393773 OR4A4PQ8NGN8 299 aa11.53□□□□□ -0.56
CHMP3-202ENST00000393773 CMSS1Q9BQ75 279 aaKnown RBP11.53□□□□□ -0.56
CHMP3-202ENST00000393773 KIAA1109Q2LD37 5005 aa11.53□□□□□ -0.56
CHMP3-202ENST00000393773 PPP5D1E7EU14 171 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 SLC17A2O00624 439 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 FABP7O15540 132 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 TUSC2O75896 110 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 LY6G6CO95867 125 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 GNAO1P09471 354 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 FOLR2P14207 255 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 KIR2DS2P43631 304 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 TAGLNQ01995 201 aaKnown RBP11.52□□□□□ -0.57
CHMP3-202ENST00000393773 CBX3Q13185 183 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 GUCA2BQ16661 112 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 VMA21Q3ZAQ7 101 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 HSD17B12Q53GQ0 312 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 IGSF11Q5DX21 431 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 TEX45Q8NA69 505 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 FBLIM1Q8WUP2 373 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 CACNG8Q8WXS5 425 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 OVOL2Q9BRP0 275 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 PLCXD1Q9NUJ7 323 aa11.52□□□□□ -0.57
CHMP3-202ENST00000393773 TECRQ9NZ01 308 aaKnown RBP11.52□□□□□ -0.57
CHMP3-202ENST00000393773 LSM2Q9Y333 95 aaKnown RBP11.52□□□□□ -0.57
CHMP3-202ENST00000393773 TRBV6-7A0A0A0MS04 114 aa11.51□□□□□ -0.57
CHMP3-202ENST00000393773 LINC00473A8K010 186 aa11.51□□□□□ -0.57
CHMP3-202ENST00000393773 BET1O15155 118 aa11.51□□□□□ -0.57
CHMP3-202ENST00000393773 MPPED1O15442 326 aa11.51□□□□□ -0.57
CHMP3-202ENST00000393773 HLA-AP01891 365 aaKnown RBP11.51□□□□□ -0.57
CHMP3-202ENST00000393773 RRASP10301 218 aa11.51□□□□□ -0.57
CHMP3-202ENST00000393773 EWSR1Q01844 656 aaKnown RBP eCLIP11.51□□□□□ -0.57
CHMP3-202ENST00000393773 ATP5G2Q06055 141 aa11.51□□□□□ -0.57
CHMP3-202ENST00000393773 C15orf32Q32M92 178 aa11.51□□□□□ -0.57
CHMP3-202ENST00000393773 C10orf55Q5SWW7 151 aa11.51□□□□□ -0.57
CHMP3-202ENST00000393773 TMEM61Q8N0U2 210 aa11.51□□□□□ -0.57
CHMP3-202ENST00000393773 NECAP1Q8NC96 275 aa11.51□□□□□ -0.57
CHMP3-202ENST00000393773 ACOT12Q8WYK0 555 aa11.51□□□□□ -0.57
CHMP3-202ENST00000393773 KCTD12Q96CX2 325 aaKnown RBP11.51□□□□□ -0.57
CHMP3-202ENST00000393773 ZNF430Q9H8G1 570 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-202ENST00000393773 LGALS9O00182 355 aa11.5□□□□□ -0.57
CHMP3-202ENST00000393773 DIRAS3O95661 229 aa11.5□□□□□ -0.57
CHMP3-202ENST00000393773 CRYZL1O95825 349 aa11.5□□□□□ -0.57
CHMP3-202ENST00000393773 FCGR3AP08637 254 aa11.5□□□□□ -0.57
CHMP3-202ENST00000393773 SAA1P0DJI8 122 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-202ENST00000393773 DUTP33316 252 aaKnown RBP11.5□□□□□ -0.57
CHMP3-202ENST00000393773 PMS2P11Q13670 270 aa11.5□□□□□ -0.57
CHMP3-202ENST00000393773 C19orf35Q6ZS72 473 aa11.5□□□□□ -0.57
CHMP3-202ENST00000393773 DHRSXQ8N5I4 330 aa11.5□□□□□ -0.57
CHMP3-202ENST00000393773 TTC9CQ8N5M4 171 aa11.5□□□□□ -0.57
CHMP3-202ENST00000393773 ST6GALNAC5Q9BVH7 336 aa11.5□□□□□ -0.57
CHMP3-202ENST00000393773 MND1Q9BWT6 205 aa11.5□□□□□ -0.57
CHMP3-202ENST00000393773 GGTLC1Q9BX51 225 aa11.5□□□□□ -0.57
CHMP3-202ENST00000393773 PLGRKTQ9HBL7 147 aa11.5□□□□□ -0.57
CHMP3-202ENST00000393773 KCNK7Q9Y2U2 307 aa11.5□□□□□ -0.57
CHMP3-202ENST00000393773 SELENOKQ9Y6D0 94 aa11.5□□□□□ -0.57
CHMP3-202ENST00000393773 TMEM213A2RRL7 107 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 CXorf65A6NEN9 183 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 NUPR2A6NF83 97 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 A8MWP6 167 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 OR2J3O76001 311 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 GSTT2P0CG29 244 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 GSTT2BP0CG30 244 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 PLA2G7Q13093 441 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 CDK10Q15131 360 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 RAB11BQ15907 218 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms