RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 MAP1LC3B2A6NCE7 125 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 WIPF3A6NGB9 483 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 HYPMO75409 117 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 VSIG8P0DPA2 414 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 SELENOVP59797 346 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 OR8B8Q15620 311 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 CST9LP1Q5W188 147 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 DPPA3Q6W0C5 159 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 TRAPPC6BQ86SZ2 158 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 SGPP2Q8IWX5 399 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 OR11L1Q8NGX0 322 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 CLDND2Q8NHS1 167 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 MAP1LC3BQ9GZQ8 125 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 IGKV1-27A0A075B6S5 117 aa16■□□□□ 0.15
CCDC50-202ENST00000392456 A0A0G2JNJ9 132 aa16■□□□□ 0.15
CCDC50-202ENST00000392456 IGLC2P0DOY2 106 aa16■□□□□ 0.15
CCDC50-202ENST00000392456 IGLC3P0DOY3 106 aa16■□□□□ 0.15
CCDC50-202ENST00000392456 LY6DQ14210 128 aa16■□□□□ 0.15
CCDC50-202ENST00000392456 RTN4RL2Q86UN3 420 aa16■□□□□ 0.15
CCDC50-202ENST00000392456 OR51G1Q8NGK1 321 aa16■□□□□ 0.15
CCDC50-202ENST00000392456 APOBEC3DQ96AK3 386 aaPredicted RBP16■□□□□ 0.15
CCDC50-202ENST00000392456 TMEM186Q96B77 213 aa16■□□□□ 0.15
CCDC50-202ENST00000392456 Q9UFV3 132 aa16■□□□□ 0.15
CCDC50-202ENST00000392456 PSG11Q9UQ72 335 aa16■□□□□ 0.15
CCDC50-202ENST00000392456 A0A1B0GUS0 222 aa16■□□□□ 0.15
CCDC50-202ENST00000392456 XRCC2O43543 280 aa16■□□□□ 0.15
CCDC50-202ENST00000392456 LILRA1O75019 489 aa16■□□□□ 0.15
CCDC50-202ENST00000392456 GLIPR1L1Q6UWM5 242 aa16■□□□□ 0.15
CCDC50-202ENST00000392456 NIT1Q86X76 327 aa16■□□□□ 0.15
CCDC50-202ENST00000392456 ZNF596Q8TC21 504 aa16■□□□□ 0.15
CCDC50-202ENST00000392456 TMEM42Q69YG0 159 aa15.99■□□□□ 0.15
CCDC50-202ENST00000392456 C22orf34Q6ZV56 151 aa15.99■□□□□ 0.15
CCDC50-202ENST00000392456 GPER1Q99527 375 aa15.99■□□□□ 0.15
CCDC50-202ENST00000392456 PRORYQ9H606 182 aa15.99■□□□□ 0.15
CCDC50-202ENST00000392456 SCGB1A1P11684 91 aa15.99■□□□□ 0.15
CCDC50-202ENST00000392456 SLAQ13239 276 aa15.99■□□□□ 0.15
CCDC50-202ENST00000392456 IAH1Q2TAA2 248 aaPredicted RBP15.99■□□□□ 0.15
CCDC50-202ENST00000392456 PIGCQ92535 297 aa15.99■□□□□ 0.15
CCDC50-202ENST00000392456 NICN1Q9BSH3 213 aa15.99■□□□□ 0.15
CCDC50-202ENST00000392456 SHANK1Q9Y566 2161 aa15.98■□□□□ 0.15
CCDC50-202ENST00000392456 FAM230AA0A1W2PPH8 454 aa15.98■□□□□ 0.15
CCDC50-202ENST00000392456 PLA2G5P39877 138 aa15.98■□□□□ 0.15
CCDC50-202ENST00000392456 RPL23AP62750 156 aaKnown RBP15.98■□□□□ 0.15
CCDC50-202ENST00000392456 PSG3Q16557 428 aa15.98■□□□□ 0.15
CCDC50-202ENST00000392456 C16orf82Q7Z2V1 217 aa15.98■□□□□ 0.15
CCDC50-202ENST00000392456 OR52L2PQ8NGH6 319 aa15.98■□□□□ 0.15
CCDC50-202ENST00000392456 C10orf35Q96D05 121 aa15.98■□□□□ 0.15
CCDC50-202ENST00000392456 ZNF391Q9UJN7 358 aa15.98■□□□□ 0.15
CCDC50-202ENST00000392456 CEACAM18A8MTB9 384 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 GPR137BO60478 399 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 SAP30O75446 220 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 NRASP01111 189 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 IGKV3-15P01624 115 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 PPIAL4GP0DN37 164 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 FAM27E3Q08E93 113 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 IGFBP7Q16270 282 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 SPATA45Q537H7 98 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 OR10W1Q8NGF6 305 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 BANF2Q9H503 90 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 Q9N2K0 584 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 MRPS16Q9Y3D3 137 aaKnown RBP15.97■□□□□ 0.15
CCDC50-202ENST00000392456 LSM5Q9Y4Y9 91 aaKnown RBP15.97■□□□□ 0.15
CCDC50-202ENST00000392456 HEATR1Q9H583 2144 aaKnown RBP15.97■□□□□ 0.15
CCDC50-202ENST00000392456 LOC102723971A0A1B0GUV8 181 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 VSTM5A8MXK1 200 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 SLC25A17O43808 307 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 RAB11AP62491 216 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 PAX2Q02962 417 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 NECAP1Q8NC96 275 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 C1orf162Q8NEQ5 155 aaPredicted RBP15.97■□□□□ 0.15
CCDC50-202ENST00000392456 SFXN3Q9BWM7 321 aa15.97■□□□□ 0.15
CCDC50-202ENST00000392456 IGHV1-69-2A0A0G2JMI3 117 aa15.96■□□□□ 0.15
CCDC50-202ENST00000392456 ZNF850A8MQ14 1090 aa15.96■□□□□ 0.15
CCDC50-202ENST00000392456 TYMSP04818 313 aa15.96■□□□□ 0.15
CCDC50-202ENST00000392456 TAS2R30P59541 319 aa15.96■□□□□ 0.15
CCDC50-202ENST00000392456 PAFAH1B2P68402 229 aa15.96■□□□□ 0.15
CCDC50-202ENST00000392456 KLRB1Q12918 225 aa15.96■□□□□ 0.15
CCDC50-202ENST00000392456 TBC1D28Q2M2D7 210 aa15.96■□□□□ 0.15
CCDC50-202ENST00000392456 OR4A47Q6IF82 309 aa15.96■□□□□ 0.15
CCDC50-202ENST00000392456 MRPL21Q7Z2W9 205 aaKnown RBP15.96■□□□□ 0.15
CCDC50-202ENST00000392456 CMTM2Q8TAZ6 248 aa15.96■□□□□ 0.15
CCDC50-202ENST00000392456 FGF23Q9GZV9 251 aaPredicted RBP15.96■□□□□ 0.15
CCDC50-202ENST00000392456 AK3Q9UIJ7 227 aa15.96■□□□□ 0.15
CCDC50-202ENST00000392456 GNB3P16520 340 aa15.96■□□□□ 0.15
CCDC50-202ENST00000392456 MTCP1P56278 107 aa15.96■□□□□ 0.15
CCDC50-202ENST00000392456 MALLQ13021 153 aa15.96■□□□□ 0.15
CCDC50-202ENST00000392456 RBMXL1Q96E39 390 aaKnown RBP15.96■□□□□ 0.15
CCDC50-202ENST00000392456 ZNF816-ZNF321PA0A0X1KG74 233 aa15.95■□□□□ 0.14
CCDC50-202ENST00000392456 TMEM14DPA8MWL7 114 aa15.95■□□□□ 0.14
CCDC50-202ENST00000392456 G3V4G9 280 aa15.95■□□□□ 0.14
CCDC50-202ENST00000392456 MSTNO14793 375 aa15.95■□□□□ 0.14
CCDC50-202ENST00000392456 ANGPTL7O43827 346 aa15.95■□□□□ 0.14
CCDC50-202ENST00000392456 GALR1P47211 349 aa15.95■□□□□ 0.14
CCDC50-202ENST00000392456 TMEM41BQ5BJD5 291 aa15.95■□□□□ 0.14
CCDC50-202ENST00000392456 CENPVQ7Z7K6 275 aaPredicted RBP15.95■□□□□ 0.14
CCDC50-202ENST00000392456 ROS1P08922 2347 aa15.95■□□□□ 0.14
CCDC50-202ENST00000392456 A0A0A6YYD4 124 aa15.95■□□□□ 0.14
CCDC50-202ENST00000392456 E5RGE8 158 aa15.95■□□□□ 0.14
CCDC50-202ENST00000392456 SPRY1O43609 319 aaPredicted RBP15.95■□□□□ 0.14
CCDC50-202ENST00000392456 CECR9P0C854 216 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms