RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 TRBV12-3P01733 135 aa12.71□□□□□ -0.38
PTPRK-208ENST00000392449 RAB3BP20337 219 aa12.71□□□□□ -0.38
PTPRK-208ENST00000392449 GADD45AP24522 165 aa12.71□□□□□ -0.38
PTPRK-208ENST00000392449 MYL9P24844 172 aa12.71□□□□□ -0.38
PTPRK-208ENST00000392449 ARFRP1Q13795 201 aa12.71□□□□□ -0.38
PTPRK-208ENST00000392449 RCHY1Q96PM5 261 aa12.71□□□□□ -0.38
PTPRK-208ENST00000392449 OR4C12Q96R67 309 aa12.71□□□□□ -0.38
PTPRK-208ENST00000392449 GINS4Q9BRT9 223 aa12.71□□□□□ -0.38
PTPRK-208ENST00000392449 RBM7Q9Y580 266 aaKnown RBP12.71□□□□□ -0.38
PTPRK-208ENST00000392449 C13orf42A0A1B0GVH6 325 aa12.7□□□□□ -0.38
PTPRK-208ENST00000392449 TRDV1A0A1B0GX56 115 aa12.7□□□□□ -0.38
PTPRK-208ENST00000392449 LINC00473A8K010 186 aa12.7□□□□□ -0.38
PTPRK-208ENST00000392449 RAB6AP20340 208 aa12.7□□□□□ -0.38
PTPRK-208ENST00000392449 ATG5Q9H1Y0 275 aa12.7□□□□□ -0.38
PTPRK-208ENST00000392449 TNCP24821 2201 aa12.7□□□□□ -0.38
PTPRK-208ENST00000392449 CRYZL1O95825 349 aa12.69□□□□□ -0.38
PTPRK-208ENST00000392449 LGALS7P47929 136 aa12.69□□□□□ -0.38
PTPRK-208ENST00000392449 TAGLNQ01995 201 aaKnown RBP12.69□□□□□ -0.38
PTPRK-208ENST00000392449 TMEM177Q53S58 311 aa12.69□□□□□ -0.38
PTPRK-208ENST00000392449 H1FOOQ8IZA3 346 aaPredicted RBP12.69□□□□□ -0.38
PTPRK-208ENST00000392449 DDB2Q92466 427 aa12.69□□□□□ -0.38
PTPRK-208ENST00000392449 VCX3BQ9H321 246 aa12.69□□□□□ -0.38
PTPRK-208ENST00000392449 COA4Q9NYJ1 87 aa12.69□□□□□ -0.38
PTPRK-208ENST00000392449 ERICH4A6NGS2 130 aa12.68□□□□□ -0.38
PTPRK-208ENST00000392449 MSGN1A6NI15 193 aa12.68□□□□□ -0.38
PTPRK-208ENST00000392449 DUTP33316 252 aaKnown RBP12.68□□□□□ -0.38
PTPRK-208ENST00000392449 TALDO1P37837 337 aa12.68□□□□□ -0.38
PTPRK-208ENST00000392449 HSPA13P48723 471 aa12.68□□□□□ -0.38
PTPRK-208ENST00000392449 DYRK1AQ13627 763 aa12.68□□□□□ -0.38
PTPRK-208ENST00000392449 RTL8BQ17RB0 113 aa12.68□□□□□ -0.38
PTPRK-208ENST00000392449 RANGRFQ9HD47 186 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-208ENST00000392449 BLOC1S6Q9UL45 172 aa12.68□□□□□ -0.38
PTPRK-208ENST00000392449 METTL21EPA6NDL7 271 aa12.67□□□□□ -0.38
PTPRK-208ENST00000392449 H3BUA1 57 aa12.67□□□□□ -0.38
PTPRK-208ENST00000392449 IGLV1-51P01701 117 aa12.67□□□□□ -0.38
PTPRK-208ENST00000392449 PRH1P02810 166 aa12.67□□□□□ -0.38
PTPRK-208ENST00000392449 SYNJ2BPP57105 145 aa12.67□□□□□ -0.38
PTPRK-208ENST00000392449 TNXAQ16473 311 aa12.67□□□□□ -0.38
PTPRK-208ENST00000392449 CDNFQ49AH0 187 aa12.67□□□□□ -0.38
PTPRK-208ENST00000392449 OR2B11Q5JQS5 317 aa12.67□□□□□ -0.38
PTPRK-208ENST00000392449 IL34Q6ZMJ4 242 aa12.67□□□□□ -0.38
PTPRK-208ENST00000392449 Q8N1Y9 231 aa12.67□□□□□ -0.38
PTPRK-208ENST00000392449 NUDCD2Q8WVJ2 157 aa12.67□□□□□ -0.38
PTPRK-208ENST00000392449 PHB2Q99623 299 aa12.67□□□□□ -0.38
PTPRK-208ENST00000392449 ST6GALNAC5Q9BVH7 336 aa12.67□□□□□ -0.38
PTPRK-208ENST00000392449 ELOVL1Q9BW60 279 aa12.67□□□□□ -0.38
PTPRK-208ENST00000392449 TINAGL1Q9GZM7 467 aaPredicted RBP12.67□□□□□ -0.38
PTPRK-208ENST00000392449 STUB1Q9UNE7 303 aa12.67□□□□□ -0.38
PTPRK-208ENST00000392449 DIRAS3O95661 229 aa12.66□□□□□ -0.38
PTPRK-208ENST00000392449 IGHV4-30-4P0DP06 118 aa12.66□□□□□ -0.38
PTPRK-208ENST00000392449 ZP3P21754 424 aa12.66□□□□□ -0.38
PTPRK-208ENST00000392449 NFYAP23511 347 aaPredicted RBP12.66□□□□□ -0.38
PTPRK-208ENST00000392449 PSMB9P28065 219 aa12.66□□□□□ -0.38
PTPRK-208ENST00000392449 CBX3Q13185 183 aa12.66□□□□□ -0.38
PTPRK-208ENST00000392449 KLF5Q13887 457 aaPredicted RBP12.66□□□□□ -0.38
PTPRK-208ENST00000392449 PRSS8Q16651 343 aa12.66□□□□□ -0.38
PTPRK-208ENST00000392449 C10orf55Q5SWW7 151 aa12.66□□□□□ -0.38
PTPRK-208ENST00000392449 ANKRD13BQ86YJ7 626 aa12.66□□□□□ -0.38
PTPRK-208ENST00000392449 ACOT12Q8WYK0 555 aa12.66□□□□□ -0.38
PTPRK-208ENST00000392449 TXNL4BQ9NX01 149 aaKnown RBP12.66□□□□□ -0.38
PTPRK-208ENST00000392449 A0A0G2JLM5 398 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 TMEM235A6NFC5 223 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 RANBP1P43487 201 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 UBE2KP61086 200 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 RPL30P62888 115 aaKnown RBP12.65□□□□□ -0.38
PTPRK-208ENST00000392449 Q6ZS49 121 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 ADAD2Q8NCV1 583 aaKnown RBP12.65□□□□□ -0.38
PTPRK-208ENST00000392449 OR9G4Q8NGQ1 327 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 SRSF12Q8WXF0 261 aaKnown RBP12.65□□□□□ -0.38
PTPRK-208ENST00000392449 ZNF430Q9H8G1 570 aaPredicted RBP12.65□□□□□ -0.38
PTPRK-208ENST00000392449 IGKV1D-13A0A0B4J2D9 117 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 IGLV2-14P01704 120 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 SAA1P0DJI8 122 aaPredicted RBP12.65□□□□□ -0.38
PTPRK-208ENST00000392449 IGKV1-13P0DP09 117 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 GABARAPL2P60520 117 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 ZNF45Q02386 682 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 VMA21Q3ZAQ7 101 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 UBE2UQ5VVX9 321 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 ZNF343Q6P1L6 599 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 C19orf35Q6ZS72 473 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 VKORC1L1Q8N0U8 176 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 SPARTQ8N0X7 666 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 TEX45Q8NA69 505 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 MUC7Q8TAX7 377 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 PEF1Q9UBV8 284 aaKnown RBP12.65□□□□□ -0.38
PTPRK-208ENST00000392449 DAPK2Q9UIK4 370 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 RAB26Q9ULW5 256 aa12.65□□□□□ -0.38
PTPRK-208ENST00000392449 DYNC2H1Q8NCM8 4307 aaKnown RBP12.64□□□□□ -0.39
PTPRK-208ENST00000392449 NOTOA8MTQ0 251 aa12.64□□□□□ -0.39
PTPRK-208ENST00000392449 C3orf84H3BNL1 204 aa12.64□□□□□ -0.39
PTPRK-208ENST00000392449 MPPED1O15442 326 aa12.64□□□□□ -0.39
PTPRK-208ENST00000392449 SSX5O60225 188 aa12.64□□□□□ -0.39
PTPRK-208ENST00000392449 FCGR3BO75015 233 aa12.64□□□□□ -0.39
PTPRK-208ENST00000392449 RRASP10301 218 aa12.64□□□□□ -0.39
PTPRK-208ENST00000392449 DTYMKP23919 212 aa12.64□□□□□ -0.39
PTPRK-208ENST00000392449 HACD4Q5VWC8 232 aa12.64□□□□□ -0.39
PTPRK-208ENST00000392449 ZNF645Q8N7E2 425 aa12.64□□□□□ -0.39
PTPRK-208ENST00000392449 LGALS14Q8TCE9 139 aa12.64□□□□□ -0.39
PTPRK-208ENST00000392449 ADTRPQ96IZ2 230 aa12.64□□□□□ -0.39
PTPRK-208ENST00000392449 GPHA2Q96T91 129 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms