RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 MMADHCQ9H3L0 296 aaPredicted RBP-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 POMKQ9H5K3 350 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 SLC35D1Q9NTN3 355 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 TMEM14BQ9NUH8 114 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 RBM12B-AS1Q9P1G2 102 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 LGALS13Q9UHV8 139 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 FBXO5Q9UKT4 447 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 STX8Q9UNK0 236 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 LIPT1Q9Y234 373 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 POMPQ9Y244 141 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 TP53TG1Q9Y2A0 90 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 PIGLQ9Y2B2 252 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 DDX49Q9Y6V7 483 aaKnown RBP-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 USF3Q68DE3 2245 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 BOD1L1Q8NFC6 3051 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 MYO15AQ9UKN7 3530 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 MYH11P35749 1972 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 ZNF608Q9ULD9 1512 aaPredicted RBP-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 FAM186AA6NE01 2351 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 AK9Q5TCS8 1911 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 ATRNO75882 1429 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 FMN1Q68DA7 1419 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 ABCC4O15439 1325 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 GVQW2A0A096LPI5 108 aaPredicted RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 IGHV2-26A0A0B4J1V2 119 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 TRAV34A0A0B4J273 112 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 TRBV2A0A0J9YWF9 115 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 LOC105371045A0A1W2PR82 267 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 TCRBV4S1A1TA0A5B7 111 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 HEATR9A2RTY3 570 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 C5orf49A4QMS7 147 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 LINC00862A6NCI5 91 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 C9orf92A6NGG3 77 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 A6NN06 94 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 B4DEV8 164 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 H0YGG7 62 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 TMEM250H0YL14 139 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 TEX46H3BTG2 121 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 J3QT63 122 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 NDUFS8O00217 210 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 NME4O00746 187 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 UBE2CO00762 179 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 TCAPO15273 167 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 OR1F1O43749 312 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 DKC1O60832 514 aaKnown RBP eCLIP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 PIAS1O75925 651 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 SCGNO76038 276 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 STARD3NLO95772 234 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 TTC4O95801 387 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 CA2P00918 260 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 MT1EP04732 61 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 HTR1AP08908 422 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 TFPTP0C1Z6 253 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 OR13C7P0DN81 318 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 CD79AP11912 226 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 COX6B1P14854 86 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 SPI1P17947 270 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 GABRG2P18507 467 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 RAB5AP20339 215 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 PSMA1P25786 263 aaKnown RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 PRDX6P30041 224 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 ARR3P36575 388 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 TAGLN2P37802 199 aaKnown RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 SSR1P43307 286 aaKnown RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 CD151P48509 253 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 CAMLGP49069 296 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 CCT3P49368 545 aaKnown RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 PPP5CP53041 499 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 AP1S2P56377 157 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 GABARAPL2P60520 117 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 C1QTNF8P60827 252 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 STX1BP61266 288 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 DCDP81605 110 aaKnown RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 PJVKQ0ZLH3 352 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 KLKP1Q107X0 134 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 BNIP2Q12982 314 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 TGFBIQ15582 683 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 RPEL1Q2QD12 228 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 TTC32Q5I0X7 151 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 IDNKQ5T6J7 187 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 AADACL3Q5VUY0 350 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 C1orf140Q5VVS0 124 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 THOC7Q6I9Y2 204 aaKnown RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 RWDD4Q6NW29 188 aaKnown RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 EBLN2Q6P2I7 272 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 CSAG1Q6PB30 78 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 XKRXQ6PP77 449 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 PET117Q6UWS5 81 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 C2orf82Q6UX34 121 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 GBP6Q6ZN66 633 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 Q6ZQT0 140 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 KCTD9Q7L273 389 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 MRPL21Q7Z2W9 205 aaKnown RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 TAF8Q7Z7C8 310 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 CLVS1Q8IUQ0 354 aaPredicted RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 ZBTB8OSQ8IWT0 167 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 BAP18Q8IXM2 172 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 C12orf45Q8N5I9 185 aaPredicted RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 BCORP1Q8N888 145 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 OR2D3Q8NGH3 330 aa-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms