RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 CYGBQ8WWM9 190 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 RXFP2Q8WXD0 754 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 ACY3Q96HD9 319 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 REEP6Q96HR9 211 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 OR4K3Q96R72 315 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 OR7D2Q96RA2 312 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 OR52B2Q96RD2 323 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 OR52E6Q96RD3 313 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 PITX2Q99697 317 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 SULT4A1Q9BR01 284 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 LXNQ9BS40 222 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 EMC6Q9BV81 110 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 SUCNR1Q9BXA5 334 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 GNB1LQ9BYB4 327 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 ULBP3Q9BZM4 244 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 POMKQ9H5K3 350 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 POPDC3Q9HBV1 291 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 LYRM2Q9NU23 88 aaPredicted RBP1.27□□□□□ -2.21
TRAV40-201ENST00000390467 ACER3Q9NUN7 267 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 UQCC1Q9NVA1 299 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 TMEM38BQ9NVV0 291 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 DMAC2Q9NW81 257 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 ST3GAL6Q9Y274 331 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 HDGFL3Q9Y3E1 203 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 KCNE3Q9Y6H6 103 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 U3KQ87 197 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 DOCK6Q96HP0 2047 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 BRCA1P38398 1863 aaKnown RBP1.26□□□□□ -2.21
TRAV40-201ENST00000390467 VIRMAQ69YN4 1812 aaKnown RBP1.26□□□□□ -2.21
TRAV40-201ENST00000390467 ADAMTSL3P82987 1691 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 FAM135AQ9P2D6 1515 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 BCL9O00512 1426 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 ZNF609O15014 1411 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 IBTKQ9P2D0 1353 aaPredicted RBP1.26□□□□□ -2.21
TRAV40-201ENST00000390467 TRAV36DV7A0A075B6V5 113 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 A0A087WUU8 490 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 IGHV3OR16-9A0A0B4J2B5 98 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 A0A0J9YY10 115 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 A0A1B0GX78 115 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 TRAPPC13A5PLN9 417 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 SIGLEC16A6NMB1 481 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 C16orf90A8MZG2 172 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 C8orf87E5RJ46 101 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 F6UZH7 168 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 H3BSA7 217 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 H7C1C5 153 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 K7EQS6 105 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 CORTO00230 105 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 GNG7O60262 68 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 PDCD6O75340 191 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 ARL6IP5O75915 188 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 PIAS1O75925 651 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 PTHP01270 115 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 APOA2P02652 100 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 ATP5G1P05496 136 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 DBIP07108 87 aaKnown RBP1.26□□□□□ -2.21
TRAV40-201ENST00000390467 MMP7P09237 267 aaPredicted RBP1.26□□□□□ -2.21
TRAV40-201ENST00000390467 LGALS1P09382 135 aaKnown RBP1.26□□□□□ -2.21
TRAV40-201ENST00000390467 OR5H8P0DN80 308 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 FGF6P10767 208 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 RPL7P18124 248 aaKnown RBP1.26□□□□□ -2.21
TRAV40-201ENST00000390467 ORM2P19652 201 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 RPS3P23396 243 aaKnown RBP eCLIP1.26□□□□□ -2.21
TRAV40-201ENST00000390467 BLVRBP30043 206 aaPredicted RBP1.26□□□□□ -2.21
TRAV40-201ENST00000390467 DDTP30046 118 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 PRSS3P35030 304 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 APLNRP35414 380 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 GGT2P36268 569 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 HSPA9P38646 679 aaKnown RBP1.26□□□□□ -2.21
TRAV40-201ENST00000390467 H2BFSP57053 126 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 NCALDP61601 193 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 PKIAP61925 76 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 LCN6P62502 163 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 HBG1P69891 147 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 HBG2P69892 147 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 PRR3P79522 188 aaKnown RBP1.26□□□□□ -2.21
TRAV40-201ENST00000390467 HIST1H1AQ02539 215 aaPredicted RBP1.26□□□□□ -2.21
TRAV40-201ENST00000390467 PRDX4Q13162 271 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 ZNF266Q14584 549 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 RGNQ15493 299 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 MORN2Q502X0 79 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 TTC32Q5I0X7 151 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 FAM201AQ5SY85 155 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 AVPI1Q5T686 147 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 CNIH2Q6PI25 160 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 DGAT2L6Q6ZPD8 337 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 Q6ZSR6 202 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 BAP18Q8IXM2 172 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 PDZD9Q8IXQ8 264 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 C20orf196Q8IYI0 205 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 ZCCHC24Q8N2G6 241 aaKnown RBP1.26□□□□□ -2.21
TRAV40-201ENST00000390467 MIR7-3HGQ8N6C7 128 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 NPWQ8N729 165 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 SLC35G3Q8N808 338 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 OR5A1Q8NGJ0 315 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 OR2T4Q8NH00 348 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 OR10G6Q8NH81 332 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 ZNF675Q8TD23 568 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 THEM6Q8WUY1 208 aa1.26□□□□□ -2.21
TRAV40-201ENST00000390467 SFT2D1Q8WV19 159 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms