RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 LRTM2Q8N967 370 aa13.71□□□□□ -0.22
PTPRN2-201ENST00000389413 SRD5A3Q9H8P0 318 aa13.71□□□□□ -0.22
PTPRN2-201ENST00000389413 PROB1E7EW31 1015 aa13.71□□□□□ -0.22
PTPRN2-201ENST00000389413 CD3EP07766 207 aa13.71□□□□□ -0.22
PTPRN2-201ENST00000389413 HSPE1P61604 102 aaKnown RBP13.71□□□□□ -0.22
PTPRN2-201ENST00000389413 CCL8P80075 99 aa13.71□□□□□ -0.22
PTPRN2-201ENST00000389413 FAM216AQ8WUB2 273 aa13.71□□□□□ -0.22
PTPRN2-201ENST00000389413 MS4A5Q9H3V2 200 aa13.71□□□□□ -0.22
PTPRN2-201ENST00000389413 TRAV34A0A0B4J273 112 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 GCGP01275 180 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 FOSL1P15407 271 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 AGAP20933 346 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 CEACAM3P40198 252 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 NABP1Q96AH0 204 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 IGKV1D-13A0A0B4J2D9 117 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 C12orf77C9JDV5 145 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 M0R2Z0 102 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 SLC31A2O15432 143 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 IGKV1-13P0DP09 117 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 SSTR5P35346 364 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 Q6ZT83 130 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 FAM117AQ9C073 453 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 LRRC3CA6NJW4 275 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 KLF7O75840 302 aaPredicted RBP13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 REG1BP48304 166 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 PAFAH1B2P68402 229 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 FOXC1Q12948 553 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 GGACTQ9BVM4 153 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 THYN1Q9P016 225 aa13.7□□□□□ -0.22
PTPRN2-201ENST00000389413 PPIAL4EA0A075B759 164 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 PPIAL4DF5H284 164 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 PPIHO43447 177 aaKnown RBP13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 P01737 135 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 ACAA1P09110 424 aaPredicted RBP13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 PPIAL4FP0DN26 164 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 ELOBQ15370 118 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 ZNF71Q9NQZ8 489 aaPredicted RBP13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 PPIAL4AQ9Y536 164 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 INSIG2Q9Y5U4 225 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 ZNF785A8K8V0 405 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 HIST1H1EP10412 219 aaKnown RBP13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 ATP1A1-AS1Q5TC04 95 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 PRSS3P2Q8NHM4 247 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 PNRC2Q9NPJ4 139 aaKnown RBP13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 TCF19Q9Y242 345 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 DMRT1Q9Y5R6 373 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 AUP1Q9Y679 476 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 A0A087WWC5 75 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 M0QZK8 103 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 GGCTO75223 188 aaKnown RBP13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 C1orf185Q5T7R7 199 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 PQLC2Q6ZP29 291 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 CLDND2Q8NHS1 167 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 TBX15Q96SF7 602 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 WNT9BO14905 357 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 SMPD2O60906 423 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 WNT5AP41221 380 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 GTF3AQ92664 365 aaKnown RBP13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 PAXXQ9BUH6 204 aa13.69□□□□□ -0.22
PTPRN2-201ENST00000389413 IGKV1-12A0A0C4DH73 117 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 IGKV1D-12P01611 117 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 CD5P06127 495 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 IFNL4K9M1U5 179 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 APCSP02743 223 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 MT-ND6P03923 174 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 ARL14EPLP0DKL9 152 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 Q6ZN92 141 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 FAM90A27PA6NNH2 459 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 GNB2P62879 340 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 ID3Q02535 119 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 RNF144BQ7Z419 303 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 WDFY1Q8IWB7 410 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 ABHD12Q8N2K0 398 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 ZNF714Q96N38 554 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 SEMA5BQ9P283 1151 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 FRMPD3Q5JV73 1810 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 BRS3P32247 399 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 HIST3H3Q16695 136 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 OR4D5Q8NGN0 318 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 VN1R17PQ8TDU5 208 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 STARD4Q96DR4 205 aa13.68□□□□□ -0.22
PTPRN2-201ENST00000389413 TCAPO15273 167 aa13.67□□□□□ -0.22
PTPRN2-201ENST00000389413 COL8A1P27658 744 aa13.67□□□□□ -0.22
PTPRN2-201ENST00000389413 LHX2P50458 406 aa13.67□□□□□ -0.22
PTPRN2-201ENST00000389413 ZNF385CQ66K41 422 aaPredicted RBP13.67□□□□□ -0.22
PTPRN2-201ENST00000389413 RAB1CQ92928 201 aa13.67□□□□□ -0.22
PTPRN2-201ENST00000389413 ASCL3Q9NQ33 180 aa13.67□□□□□ -0.22
PTPRN2-201ENST00000389413 HIST1H1BP16401 226 aaKnown RBP13.67□□□□□ -0.22
PTPRN2-201ENST00000389413 ZNF525Q8N782 197 aa13.67□□□□□ -0.22
PTPRN2-201ENST00000389413 DIRC2Q96SL1 478 aa13.67□□□□□ -0.22
PTPRN2-201ENST00000389413 WFDC1Q9HC57 220 aa13.67□□□□□ -0.22
PTPRN2-201ENST00000389413 PAM16Q9Y3D7 125 aa13.67□□□□□ -0.22
PTPRN2-201ENST00000389413 CEACAM18A8MTB9 384 aa13.67□□□□□ -0.22
PTPRN2-201ENST00000389413 ZNF883P0CG24 379 aa13.67□□□□□ -0.22
PTPRN2-201ENST00000389413 CLDN18P56856 261 aa13.67□□□□□ -0.22
PTPRN2-201ENST00000389413 VENTXO95231 258 aa13.66□□□□□ -0.22
PTPRN2-201ENST00000389413 ZFP36L1Q07352 338 aaKnown RBP13.66□□□□□ -0.22
PTPRN2-201ENST00000389413 ACP7Q6ZNF0 438 aa13.66□□□□□ -0.22
PTPRN2-201ENST00000389413 CYP2G1PQ6ZSU1 146 aa13.66□□□□□ -0.22
PTPRN2-201ENST00000389413 FGFBP3Q8TAT2 258 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms