RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ABHD12Q8N2K0 398 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 TMEM170AQ8WVE7 144 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 CYYR1Q96J86 154 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 WDR54Q9H977 334 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 DOCK7Q96N67 2140 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 CEACAM18A8MTB9 384 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 RFPL3SP0C7P2 107 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 C1QTNF9P0C862 333 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 SRIP30626 198 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 MRPS11P82912 194 aaKnown RBP11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 ZNF645Q8N7E2 425 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 C1orf147Q96MC9 270 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 NPCDR1Q9BY65 106 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 CHRNA10Q9GZZ6 450 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 IL19Q9UHD0 177 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 ODAMA1E959 279 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 LRRC30A6NM36 301 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 MARCH11A6NNE9 402 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 SSPNQ14714 243 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 PCOLCEQ15113 449 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 SPSB3Q6PJ21 355 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 MMD2Q8IY49 270 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 NHLRC2Q8NBF2 726 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 ZCCHC14Q8WYQ9 949 aaKnown RBP11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 GTF3AQ92664 365 aaKnown RBP11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 WDYHV1Q96HA8 205 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 PNRC2Q9NPJ4 139 aaKnown RBP11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 COL4A6Q14031 1691 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 NKX6-3A6NJ46 265 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 VENTXO95231 258 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 CT45A10P0DMU9 189 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 CTSSP25774 331 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 TNFSF10P50591 281 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 RAB7AP51149 207 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 CDPF1Q6NVV7 123 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 CPEB3Q8NE35 698 aaKnown RBP11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 UQCR10Q9UDW1 63 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 IL3RAP26951 378 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 LCN2P80188 198 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 ZNF738Q8NE65 137 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 CT55Q8WUE5 264 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 WNT10AQ9GZT5 417 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 CXXC4Q9H2H0 198 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 NOTCH4Q99466 2003 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 SPTBN1Q01082 2364 aaKnown RBP11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 A6NNC1 897 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 NAPSAO96009 420 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 LINC00271P0C7V0 271 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 CD33P20138 364 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 CRYBB3P26998 211 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 CHRNB4P30926 498 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 COX19Q49B96 90 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 FA2HQ7L5A8 372 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 ZNF664Q8N3J9 261 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 K7EQM0 130 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 CNIH1O95406 144 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 OR4A8P0C604 315 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 FCER1GP30273 86 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 ZNF137PP52743 207 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 RPL31P62899 125 aaKnown RBP11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 ABLIM2Q6H8Q1 611 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 IL36GQ9NZH8 169 aa11.17□□□□□ -0.62
TRAPPC9-201ENST00000389328 A0A1B0GW64 132 aa11.16□□□□□ -0.62
TRAPPC9-201ENST00000389328 HTR1DP28221 377 aa11.16□□□□□ -0.62
TRAPPC9-201ENST00000389328 MT-CO3P00414 261 aa11.16□□□□□ -0.62
TRAPPC9-201ENST00000389328 GZMHP20718 246 aa11.16□□□□□ -0.62
TRAPPC9-201ENST00000389328 ZNF83P51522 516 aa11.16□□□□□ -0.62
TRAPPC9-201ENST00000389328 SLC25A53Q5H9E4 307 aa11.16□□□□□ -0.62
TRAPPC9-201ENST00000389328 DOLPP1Q86YN1 238 aa11.16□□□□□ -0.62
TRAPPC9-201ENST00000389328 SAXO1Q8IYX7 474 aa11.16□□□□□ -0.62
TRAPPC9-201ENST00000389328 OR2M7Q8NG81 312 aa11.16□□□□□ -0.62
TRAPPC9-201ENST00000389328 POLEQ07864 2286 aa11.16□□□□□ -0.62
TRAPPC9-201ENST00000389328 PATE3B3GLJ2 98 aa11.16□□□□□ -0.62
TRAPPC9-201ENST00000389328 BMPR1BO00238 502 aa11.16□□□□□ -0.62
TRAPPC9-201ENST00000389328 OTX1P32242 354 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC9-201ENST00000389328 TRA2AQ13595 282 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRAPPC9-201ENST00000389328 IBA57Q5T440 356 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-201ENST00000389328 SMIM15Q7Z3B0 74 aa11.16□□□□□ -0.62
TRAPPC9-201ENST00000389328 FGFBP3Q8TAT2 258 aa11.16□□□□□ -0.62
TRAPPC9-201ENST00000389328 IGHV3OR15-7A0A075B7D8 119 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 CLDN14O95500 239 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 CEACAM1P13688 526 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 LIME1Q9H400 295 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 DECR2Q9NUI1 292 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 PROCRQ9UNN8 238 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 PLXNA4Q9HCM2 1894 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 DOCK8Q8NF50 2099 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 UTRNP46939 3433 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 SCO2A0A1W2PP80 73 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 TFPI2P48307 235 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 NHLH1Q02575 133 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 CFHR1Q03591 330 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 PRSS3P2Q8NHM4 247 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 GSX1Q9H4S2 264 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 DNAJC4Q9NNZ3 241 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 RAB29O14966 203 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 MPDU1O75352 247 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 SERF1AO75920 110 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 GZMBP10144 247 aa11.15□□□□□ -0.62
TRAPPC9-201ENST00000389328 ARSJQ5FYB0 599 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms