RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 ZNF83P51522 516 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 ELLP55199 621 aaPredicted RBP12.43□□□□□ -0.42
SCFD2-201ENST00000388940 NKX6-1P78426 367 aaPredicted RBP12.43□□□□□ -0.42
SCFD2-201ENST00000388940 EDDM3AQ14507 147 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 NCR3LG1Q68D85 454 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 Q6ZS92 163 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 R3HDM4Q96D70 268 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 MEGF10Q96KG7 1140 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 DUSP13Q9UII6 198 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 FAM215AQ9Y5M1 114 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 RBFOX2O43251 390 aaKnown RBP eCLIP12.42□□□□□ -0.42
SCFD2-201ENST00000388940 TIMP3P35625 211 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 ACSM6Q6P461 480 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 LHX4Q969G2 390 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 ZDHHC16Q969W1 377 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 S100PBPQ96BU1 408 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 GAB2Q9UQC2 676 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 IGLV3-9A0A075B6K5 115 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 CTXND1A0A1B0GTU2 59 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 M0R1B8 84 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 AP4M1O00189 453 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 ITGB1BP1O14713 200 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 CRYAAP02489 173 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 KLF3P57682 345 aaPredicted RBP12.42□□□□□ -0.42
SCFD2-201ENST00000388940 LOXL3P58215 753 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 OR2B8PP59922 312 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 FABP9Q0Z7S8 132 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 Q8WTZ3 238 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 OR2V2Q96R30 315 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 TMPRSS5Q9H3S3 457 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 SDF2L1Q9HCN8 221 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 GNG12Q9UBI6 72 aa12.42□□□□□ -0.42
SCFD2-201ENST00000388940 A0A1B0GV90 55 aa12.41□□□□□ -0.42
SCFD2-201ENST00000388940 CEBPZOSA8MTT3 80 aa12.41□□□□□ -0.42
SCFD2-201ENST00000388940 CGB3P0DN86 165 aa12.41□□□□□ -0.42
SCFD2-201ENST00000388940 CGB7P0DN87 165 aa12.41□□□□□ -0.42
SCFD2-201ENST00000388940 FGF7P21781 194 aa12.41□□□□□ -0.42
SCFD2-201ENST00000388940 GATA4P43694 442 aa12.41□□□□□ -0.42
SCFD2-201ENST00000388940 RTP5Q14D33 572 aa12.41□□□□□ -0.42
SCFD2-201ENST00000388940 SSX2Q16385 188 aa12.41□□□□□ -0.42
SCFD2-201ENST00000388940 LBHQ53QV2 105 aaPredicted RBP12.41□□□□□ -0.42
SCFD2-201ENST00000388940 C1orf185Q5T7R7 199 aa12.41□□□□□ -0.42
SCFD2-201ENST00000388940 DOCK11Q5JSL3 2073 aa12.41□□□□□ -0.42
SCFD2-201ENST00000388940 LINC00205P59089 165 aa12.41□□□□□ -0.42
SCFD2-201ENST00000388940 PDLIM3Q53GG5 364 aaPredicted RBP12.41□□□□□ -0.42
SCFD2-201ENST00000388940 OR52E5Q8NH55 327 aa12.41□□□□□ -0.42
SCFD2-201ENST00000388940 NPCDR1Q9BY65 106 aa12.41□□□□□ -0.42
SCFD2-201ENST00000388940 ZNF318Q5VUA4 2279 aa12.4□□□□□ -0.42
SCFD2-201ENST00000388940 FRYQ5TBA9 3013 aa12.4□□□□□ -0.42
SCFD2-201ENST00000388940 HCFC1P51610 2035 aa12.4□□□□□ -0.42
SCFD2-201ENST00000388940 RBMXL2O75526 392 aaKnown RBP12.4□□□□□ -0.42
SCFD2-201ENST00000388940 CYB5R3P00387 301 aaPredicted RBP12.4□□□□□ -0.42
SCFD2-201ENST00000388940 OR9G9P0C7N8 305 aa12.4□□□□□ -0.42
SCFD2-201ENST00000388940 RPS10P46783 165 aaKnown RBP12.4□□□□□ -0.42
SCFD2-201ENST00000388940 RND2P52198 227 aa12.4□□□□□ -0.42
SCFD2-201ENST00000388940 MOGAT3Q86VF5 341 aa12.4□□□□□ -0.42
SCFD2-201ENST00000388940 OR10G9Q8NGN4 311 aa12.4□□□□□ -0.42
SCFD2-201ENST00000388940 OR10G7Q8NGN6 311 aa12.4□□□□□ -0.42
SCFD2-201ENST00000388940 FAM222BQ8WU58 562 aa12.4□□□□□ -0.42
SCFD2-201ENST00000388940 QTRT1Q9BXR0 403 aaKnown RBP12.4□□□□□ -0.42
SCFD2-201ENST00000388940 ACTR3CQ9C0K3 210 aaPredicted RBP12.4□□□□□ -0.42
SCFD2-201ENST00000388940 RAB9BQ9NP90 201 aa12.4□□□□□ -0.42
SCFD2-201ENST00000388940 OR6C3Q9NZP0 311 aa12.4□□□□□ -0.42
SCFD2-201ENST00000388940 CBY1Q9Y3M2 126 aa12.4□□□□□ -0.42
SCFD2-201ENST00000388940 TTC28Q96AY4 2481 aa12.4□□□□□ -0.42
SCFD2-201ENST00000388940 C15orf62A8K5M9 175 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 C17orf112F2Z3M2 114 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 CXCL1P09341 107 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 KIR2DS2P43631 304 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 ERVFRD-1P60508 538 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 WDR25Q64LD2 544 aaPredicted RBP12.39□□□□□ -0.43
SCFD2-201ENST00000388940 SFXN3Q9BWM7 321 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 IGHV3OR15-7A0A075B7D8 119 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 ATXN7O15265 892 aaPredicted RBP12.39□□□□□ -0.43
SCFD2-201ENST00000388940 SOX15O60248 233 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 FCGR3BO75015 233 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 CRYABP02511 175 aaKnown RBP12.39□□□□□ -0.43
SCFD2-201ENST00000388940 CD81P60033 236 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 RPP30P78346 268 aaKnown RBP12.39□□□□□ -0.43
SCFD2-201ENST00000388940 MEF2BQ02080 365 aaPredicted RBP12.39□□□□□ -0.43
SCFD2-201ENST00000388940 TFF3Q07654 80 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 LTC4SQ16873 150 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 SPRNQ5BIV9 151 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 C9orf152Q5JTZ5 239 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 FFAR4Q5NUL3 377 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 ZNF343Q6P1L6 599 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 ZNF709Q8N972 641 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 DIRC2Q96SL1 478 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 CTDSP1Q9GZU7 261 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 IFI27L2Q9H2X8 130 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 CALYQ9NYX4 217 aa12.39□□□□□ -0.43
SCFD2-201ENST00000388940 DSCAML1Q8TD84 2053 aa12.38□□□□□ -0.43
SCFD2-201ENST00000388940 TMEM250H0YL14 139 aa12.38□□□□□ -0.43
SCFD2-201ENST00000388940 CLDN34H7C241 214 aa12.38□□□□□ -0.43
SCFD2-201ENST00000388940 CEACAM8P31997 349 aaPredicted RBP12.38□□□□□ -0.43
SCFD2-201ENST00000388940 RAB7AP51149 207 aa12.38□□□□□ -0.43
SCFD2-201ENST00000388940 ZNF134P52741 427 aa12.38□□□□□ -0.43
SCFD2-201ENST00000388940 ZNRF1Q8ND25 227 aa12.38□□□□□ -0.43
SCFD2-201ENST00000388940 OR13D1Q8NGV5 346 aa12.38□□□□□ -0.43
SCFD2-201ENST00000388940 ITLN1Q8WWA0 313 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms