RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 IGHV1OR15-9A0A0B4J2B8 117 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 H0YL77 283 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 UNC119Q13432 240 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 VKORC1L1Q8N0U8 176 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 TTC9CQ8N5M4 171 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 TAF15Q92804 592 aaKnown RBP eCLIP5.06□□□□□ -1.6
RFX3-204ENST00000382004 NEUROG1Q92886 237 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 R3HDMLQ9H3Y0 253 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 EDA2RQ9HAV5 297 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 C7orf66A4D0T2 115 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 SYNGR3O43761 229 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 CA11O75493 328 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 LINC00614P0C842 121 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 FGF5P12034 268 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 CD69Q07108 199 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 WDR82Q6UXN9 313 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 CHST5Q9GZS9 411 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 H7C1H1 209 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 C8orf88P0DMB2 117 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 TDGF1P3P51864 188 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 FOXA3P55318 350 aaPredicted RBP5.06□□□□□ -1.6
RFX3-204ENST00000382004 TMEM249Q2WGJ8 235 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 C9orf50Q5SZB4 431 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 SAMD13Q5VXD3 122 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 NIT1Q86X76 327 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 HOGA1Q86XE5 327 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 SPSB4Q96A44 273 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 RPP25Q9BUL9 199 aaKnown RBP5.06□□□□□ -1.6
RFX3-204ENST00000382004 FLRT3Q9NZU0 649 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 TUBD1Q9UJT1 453 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 SPAARA0A1B0GVQ0 90 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 LOC390937A0A1W2PQ73 354 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 NKX2-8O15522 239 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 DXOO77932 396 aaKnown RBP5.06□□□□□ -1.6
RFX3-204ENST00000382004 SFTPCP11686 197 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 RNASE4P34096 147 aaKnown RBP5.06□□□□□ -1.6
RFX3-204ENST00000382004 ZNF826PQ6ZT77 177 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 LINC01587Q99440 93 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 ANAPC13Q9BS18 74 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 CISD1Q9NZ45 108 aaKnown RBP5.06□□□□□ -1.6
RFX3-204ENST00000382004 CLDN16Q9Y5I7 305 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 S4R3C0 116 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 V9GYH0 126 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 CACNA1DQ01668 2161 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 A0A1W2PP11 408 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 DPRXA6NFQ7 191 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 H0Y980 276 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 HRKO00198 91 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 ZNF688P0C7X2 276 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 ATP5J2P56134 94 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 ATG4DQ86TL0 474 aaPredicted RBP5.06□□□□□ -1.6
RFX3-204ENST00000382004 RGPD1P0DJD0 1748 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 TRGV2A0A075B6R0 118 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 NPIPB4C9JG80 1138 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 TMEM50AO95807 157 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 SNAI3Q3KNW1 292 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 GCSAMQ8N6F7 178 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 TEX29Q8N6K0 151 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 GPBAR1Q8TDU6 330 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 IDI2-AS1Q9NZ38 188 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 SLC25A15Q9Y619 301 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 LAMA4Q16363 1823 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 ANKRD31Q8N7Z5 1873 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 C19orf67A6NJJ6 358 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 MGST3O14880 152 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 OR2H2O95918 312 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 ASAH2BP0C7U1 165 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 CTGFP29279 349 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 MPV17P39210 176 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 UCP2P55851 309 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 SRSF4Q08170 494 aaKnown RBP5.05□□□□□ -1.6
RFX3-204ENST00000382004 CD300LDQ6UXZ3 194 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 TCF23Q7RTU1 214 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 MARS2Q96GW9 593 aaKnown RBP5.05□□□□□ -1.6
RFX3-204ENST00000382004 VGLL1Q99990 258 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 CBLN1P23435 193 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 TMEM92Q6UXU6 159 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 TMEM252Q8N6L7 170 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 CCL19Q99731 98 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 ZNF107Q9UII5 783 aaPredicted RBP5.05□□□□□ -1.6
RFX3-204ENST00000382004 MRPS18BQ9Y676 258 aaKnown RBP5.05□□□□□ -1.6
RFX3-204ENST00000382004 TRAV24A0A0B4J272 114 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 IGLV3-25P01717 112 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 ICAM4Q14773 271 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 SH3BGRL3Q9H299 93 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 MIXL1Q9H2W2 232 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 SMDT1Q9H4I9 107 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 LOC105371242A0A075B767 164 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 KCNE1BA0A087WTH5 132 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 PPIAL4CA0A0B4J2A2 164 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 MOSP00540 346 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 PPIAL4GP0DN37 164 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 ASIPP42127 132 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 SRSF6Q13247 344 aaKnown RBP5.05□□□□□ -1.6
RFX3-204ENST00000382004 PLSCR2Q9NRY7 297 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 ST6GALNAC2Q9UJ37 374 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 AHCTF1Q8WYP5 2266 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 APOHP02749 345 aaPredicted RBP5.05□□□□□ -1.6
RFX3-204ENST00000382004 TRGV3P03979 118 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 LIFP15018 202 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms