RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 ABCA7Q8IZY2 2146 aa12.59□□□□□ -0.39
CTNS-202ENST00000381870 C10orf142B7Z368 130 aa12.59□□□□□ -0.39
CTNS-202ENST00000381870 RAMP3O60896 148 aa12.59□□□□□ -0.39
CTNS-202ENST00000381870 TNFSF4P23510 183 aa12.59□□□□□ -0.39
CTNS-202ENST00000381870 G6PCP35575 357 aa12.59□□□□□ -0.39
CTNS-202ENST00000381870 PRRX1P54821 245 aa12.59□□□□□ -0.39
CTNS-202ENST00000381870 RAET1LQ5VY80 246 aa12.59□□□□□ -0.39
CTNS-202ENST00000381870 OR8I2Q8N0Y5 310 aa12.59□□□□□ -0.39
CTNS-202ENST00000381870 KLHDC1Q8N7A1 406 aa12.59□□□□□ -0.39
CTNS-202ENST00000381870 TCTEX1D1Q8N7M0 179 aa12.59□□□□□ -0.39
CTNS-202ENST00000381870 OR2M7Q8NG81 312 aa12.59□□□□□ -0.39
CTNS-202ENST00000381870 OR2D3Q8NGH3 330 aa12.59□□□□□ -0.39
CTNS-202ENST00000381870 SFXN3Q9BWM7 321 aa12.59□□□□□ -0.39
CTNS-202ENST00000381870 MRPS16Q9Y3D3 137 aaKnown RBP12.59□□□□□ -0.39
CTNS-202ENST00000381870 TRAV24A0A0B4J272 114 aa12.58□□□□□ -0.4
CTNS-202ENST00000381870 TRAPPC2LH3BP13 241 aa12.58□□□□□ -0.4
CTNS-202ENST00000381870 ARL14EPLP0DKL9 152 aa12.58□□□□□ -0.4
CTNS-202ENST00000381870 IGFBP4P22692 258 aa12.58□□□□□ -0.4
CTNS-202ENST00000381870 RAB30Q15771 203 aa12.58□□□□□ -0.4
CTNS-202ENST00000381870 MMD2Q8IY49 270 aa12.58□□□□□ -0.4
CTNS-202ENST00000381870 FAM122AQ96E09 287 aa12.58□□□□□ -0.4
CTNS-202ENST00000381870 SRXN1Q9BYN0 137 aa12.58□□□□□ -0.4
CTNS-202ENST00000381870 FGF21Q9NSA1 209 aa12.58□□□□□ -0.4
CTNS-202ENST00000381870 NAT8BQ9UHF3 227 aa12.58□□□□□ -0.4
CTNS-202ENST00000381870 TRAV9-1A0A075B6T8 112 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 IGHV2-26A0A0B4J1V2 119 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 A0A1W2PPV4 95 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 FAM166BA8MTA8 275 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 C17orf112F2Z3M2 114 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.57□□□□□ -0.4
CTNS-202ENST00000381870 VAMP5O95183 116 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 COL8A2P25067 703 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 RAC1P63000 192 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 VAMP3Q15836 100 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 VHLLQ6RSH7 139 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 ZPBPQ9BS86 351 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 LRP5LA4QPB2 252 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 RRHO14718 337 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 ZNF324O75467 553 aaPredicted RBP12.57□□□□□ -0.4
CTNS-202ENST00000381870 CA2P00918 260 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 MYF5P13349 255 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 SLC35B1P78383 322 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 RPEL1Q2QD12 228 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 LDLRAD2Q5SZI1 272 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 SMIM15Q7Z3B0 74 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 GCNT2Q8N0V5 402 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 DRAM1Q8N682 238 aa12.57□□□□□ -0.4
CTNS-202ENST00000381870 SPACA9Q96E40 222 aaPredicted RBP12.57□□□□□ -0.4
CTNS-202ENST00000381870 GMPPAQ96IJ6 420 aaPredicted RBP12.57□□□□□ -0.4
CTNS-202ENST00000381870 IGLC7A0M8Q6 106 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 ODAMA1E959 279 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 G3V3Y1 287 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 NTF3P20783 257 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 HTD2P86397 168 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 TGFBR3Q03167 851 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 ZNF816Q0VGE8 651 aaPredicted RBP12.56□□□□□ -0.4
CTNS-202ENST00000381870 ESPL1Q14674 2120 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 VWC2Q2TAL6 325 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 MKXQ8IYA7 352 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 GNB1LQ9BYB4 327 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 TP73-AS1Q9UF72 201 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 SAA2-SAA4A0A096LPE2 208 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 A0A0J9YW62 118 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 LRRC30A6NM36 301 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 ZFAND5O76080 213 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 FKBP2P26885 142 aaKnown RBP12.56□□□□□ -0.4
CTNS-202ENST00000381870 CCR5P51681 352 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 SLC23A3Q6PIS1 610 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 NUDT10Q8NFP7 164 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 RLN3Q8WXF3 142 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 DEPPQ9NTK1 212 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 YTHDF2Q9Y5A9 579 aaKnown RBP12.56□□□□□ -0.4
CTNS-202ENST00000381870 CHCHD2Q9Y6H1 151 aaPredicted RBP12.56□□□□□ -0.4
CTNS-202ENST00000381870 BRWD1Q9NSI6 2320 aa12.56□□□□□ -0.4
CTNS-202ENST00000381870 TRBV6-6A0A0A6YYG2 114 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 A0A1W2PPC4 97 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 CCNOP22674 350 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 OR10J3Q5JRS4 329 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 C17orf82Q86X59 251 aaPredicted RBP12.55□□□□□ -0.4
CTNS-202ENST00000381870 OR4F17Q8NGA8 305 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 SPSB4Q96A44 273 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 CLEC7AQ9BXN2 247 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 CHODLQ9H9P2 273 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 TRAV30A0A087WSZ9 112 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 IGHV1-69-2A0A0G2JMI3 117 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 S1PR2O95136 353 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 CCL2P13500 99 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 SRIP30626 198 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 RPL31P62899 125 aaKnown RBP12.55□□□□□ -0.4
CTNS-202ENST00000381870 ZXDAP98168 799 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 TSKUQ8WUA8 353 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 FOXB1Q99853 325 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 CST9LQ9H4G1 147 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 V9GYV3 84 aa12.55□□□□□ -0.4
CTNS-202ENST00000381870 IGHV1OR21-1A0A087WYE8 117 aa12.54□□□□□ -0.4
CTNS-202ENST00000381870 CLDN14O95500 239 aa12.54□□□□□ -0.4
CTNS-202ENST00000381870 CEACAM16Q2WEN9 425 aa12.54□□□□□ -0.4
CTNS-202ENST00000381870 STUMQ69YW2 141 aa12.54□□□□□ -0.4
CTNS-202ENST00000381870 TMEM136Q6ZRR5 245 aa12.54□□□□□ -0.4
CTNS-202ENST00000381870 RAB1CQ92928 201 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms