RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 BLCAPP62952 87 aa12.32□□□□□ -0.44
PDGFB-202ENST00000381551 CATR1Q13166 79 aa12.32□□□□□ -0.44
PDGFB-202ENST00000381551 ABCA11PQ4W5N1 156 aa12.32□□□□□ -0.44
PDGFB-202ENST00000381551 C11orf88Q6PI97 169 aa12.32□□□□□ -0.44
PDGFB-202ENST00000381551 TBC1D26Q86UD7 250 aa12.32□□□□□ -0.44
PDGFB-202ENST00000381551 SPAG16Q8N0X2 631 aa12.32□□□□□ -0.44
PDGFB-202ENST00000381551 NPBQ8NG41 125 aa12.32□□□□□ -0.44
PDGFB-202ENST00000381551 TAF15Q92804 592 aaKnown RBP eCLIP12.32□□□□□ -0.44
PDGFB-202ENST00000381551 SCGB3A2Q96PL1 93 aa12.32□□□□□ -0.44
PDGFB-202ENST00000381551 SLC25A21Q9BQT8 299 aaPredicted RBP12.32□□□□□ -0.44
PDGFB-202ENST00000381551 C1RLQ9NZP8 487 aa12.32□□□□□ -0.44
PDGFB-202ENST00000381551 RNF212BA8MTL3 300 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 M0QZK8 103 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 FGF16O43320 207 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 LYRM1O43325 122 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 RAMP3O60896 148 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 CRYBA1P05813 215 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 F2RP25116 425 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 CNTFRP26992 372 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 BTCP35070 178 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 KIR2DS2P43631 304 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 LGALS7P47929 136 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 RPS16P62249 146 aaKnown RBP12.31□□□□□ -0.44
PDGFB-202ENST00000381551 RELBQ01201 579 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 OR2B11Q5JQS5 317 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 DHRS7BQ6IAN0 325 aaPredicted RBP12.31□□□□□ -0.44
PDGFB-202ENST00000381551 Q8N9W7 124 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 OR51H1Q8NH63 302 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 TSC22D3Q99576 134 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 TBC1D24Q9ULP9 559 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 C14orf166Q9Y224 244 aaKnown RBP12.31□□□□□ -0.44
PDGFB-202ENST00000381551 VSIG4Q9Y279 399 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 MOB4Q9Y3A3 225 aa12.31□□□□□ -0.44
PDGFB-202ENST00000381551 SRRM4A7MD48 611 aaKnown RBP12.3□□□□□ -0.44
PDGFB-202ENST00000381551 NBR2O15453 112 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 RBFOX2O43251 390 aaKnown RBP eCLIP12.3□□□□□ -0.44
PDGFB-202ENST00000381551 PEX14O75381 377 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 NDUFA3O95167 84 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 CRYZL1O95825 349 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 CBX3Q13185 183 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 ASAH1Q13510 395 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 PSG5Q15238 335 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 MMDQ15546 238 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 KRTAP24-1Q3LI83 254 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 Q6ZSV7 163 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 FAM71E2Q8N5Q1 922 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 TCTEX1D1Q8N7M0 179 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.3□□□□□ -0.44
PDGFB-202ENST00000381551 C5orf56Q8N8D9 126 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 POC5Q8NA72 575 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 OR4S2Q8NH73 311 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 OSR1Q8TAX0 266 aaPredicted RBP12.3□□□□□ -0.44
PDGFB-202ENST00000381551 CD300LFQ8TDQ1 290 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 NPFFR1Q9GZQ6 430 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 COPZ2Q9P299 210 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 ATRQ13535 2644 aa12.3□□□□□ -0.44
PDGFB-202ENST00000381551 FBN1P35555 2871 aaKnown RBP12.29□□□□□ -0.44
PDGFB-202ENST00000381551 SHOXO15266 292 aa12.29□□□□□ -0.44
PDGFB-202ENST00000381551 TSPAN9O75954 239 aa12.29□□□□□ -0.44
PDGFB-202ENST00000381551 NDUFB6O95139 128 aa12.29□□□□□ -0.44
PDGFB-202ENST00000381551 IGLV2-23P01705 113 aa12.29□□□□□ -0.44
PDGFB-202ENST00000381551 VSIG10L2P0DP72 767 aa12.29□□□□□ -0.44
PDGFB-202ENST00000381551 RBMS2Q15434 407 aaKnown RBP12.29□□□□□ -0.44
PDGFB-202ENST00000381551 ZNF585BQ52M93 769 aa12.29□□□□□ -0.44
PDGFB-202ENST00000381551 Q6ZS46 218 aa12.29□□□□□ -0.44
PDGFB-202ENST00000381551 CCDC71LQ8N9Z2 235 aa12.29□□□□□ -0.44
PDGFB-202ENST00000381551 ADAD2Q8NCV1 583 aaKnown RBP12.29□□□□□ -0.44
PDGFB-202ENST00000381551 TSNAXQ99598 290 aaKnown RBP12.29□□□□□ -0.44
PDGFB-202ENST00000381551 FAM212BQ9NTI7 297 aaPredicted RBP12.29□□□□□ -0.44
PDGFB-202ENST00000381551 SH2D7A6NKC9 451 aaPredicted RBP12.28□□□□□ -0.44
PDGFB-202ENST00000381551 RRHO14718 337 aa12.28□□□□□ -0.44
PDGFB-202ENST00000381551 NDUFA7O95182 113 aa12.28□□□□□ -0.44
PDGFB-202ENST00000381551 HPRT1P00492 218 aa12.28□□□□□ -0.44
PDGFB-202ENST00000381551 CRYGBP07316 175 aa12.28□□□□□ -0.44
PDGFB-202ENST00000381551 HKR1P10072 659 aa12.28□□□□□ -0.44
PDGFB-202ENST00000381551 SLC6A1P30531 599 aa12.28□□□□□ -0.44
PDGFB-202ENST00000381551 LPAR6P43657 344 aa12.28□□□□□ -0.44
PDGFB-202ENST00000381551 C5orf64Q2M2E5 130 aa12.28□□□□□ -0.44
PDGFB-202ENST00000381551 TMEM230Q96A57 120 aa12.28□□□□□ -0.44
PDGFB-202ENST00000381551 HARBI1Q96MB7 349 aa12.28□□□□□ -0.44
PDGFB-202ENST00000381551 RASL11BQ9BPW5 248 aa12.28□□□□□ -0.44
PDGFB-202ENST00000381551 PRSS22Q9GZN4 317 aa12.28□□□□□ -0.44
PDGFB-202ENST00000381551 RANBP3Q9H6Z4 567 aaPredicted RBP12.28□□□□□ -0.44
PDGFB-202ENST00000381551 PLEKHA2Q9HB19 425 aa12.28□□□□□ -0.44
PDGFB-202ENST00000381551 LIN7CQ9NUP9 197 aaKnown RBP12.28□□□□□ -0.44
PDGFB-202ENST00000381551 FBN3Q75N90 2809 aa12.27□□□□□ -0.44
PDGFB-202ENST00000381551 C3orf85A0A1B0GTC6 90 aa12.27□□□□□ -0.45
PDGFB-202ENST00000381551 CRYM-AS1A6NIL9 109 aa12.27□□□□□ -0.45
PDGFB-202ENST00000381551 SPDEFO95238 335 aa12.27□□□□□ -0.45
PDGFB-202ENST00000381551 LIN54Q6MZP7 749 aa12.27□□□□□ -0.45
PDGFB-202ENST00000381551 MZT2BQ6NZ67 158 aa12.27□□□□□ -0.45
PDGFB-202ENST00000381551 Q8N2B8 174 aa12.27□□□□□ -0.45
PDGFB-202ENST00000381551 FBXL15Q9H469 300 aa12.27□□□□□ -0.45
PDGFB-202ENST00000381551 C16orf95Q9H693 158 aa12.27□□□□□ -0.45
PDGFB-202ENST00000381551 NAA60Q9H7X0 242 aa12.27□□□□□ -0.45
PDGFB-202ENST00000381551 ZNF702PQ9H963 129 aa12.27□□□□□ -0.45
PDGFB-202ENST00000381551 KIAA1456Q9P272 454 aa12.27□□□□□ -0.45
PDGFB-202ENST00000381551 TEX13DA0A0J9YY54 714 aaPredicted RBP12.26□□□□□ -0.45
PDGFB-202ENST00000381551 TMEM89A2RUT3 159 aa12.26□□□□□ -0.45
PDGFB-202ENST00000381551 H0Y980 276 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms