RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 HLA-DRB3P79483 266 aa12.81□□□□□ -0.36
HMGN1-203ENST00000380748 PRSS8Q16651 343 aa12.81□□□□□ -0.36
HMGN1-203ENST00000380748 IDO2Q6ZQW0 420 aa12.81□□□□□ -0.36
HMGN1-203ENST00000380748 GPHB5Q86YW7 130 aa12.81□□□□□ -0.36
HMGN1-203ENST00000380748 CDH26Q8IXH8 852 aa12.81□□□□□ -0.36
HMGN1-203ENST00000380748 STPG3Q8N7X2 389 aa12.81□□□□□ -0.36
HMGN1-203ENST00000380748 OR1L6Q8NGR2 347 aa12.81□□□□□ -0.36
HMGN1-203ENST00000380748 HDHD3Q9BSH5 251 aaPredicted RBP12.81□□□□□ -0.36
HMGN1-203ENST00000380748 MRPS18AQ9NVS2 196 aaKnown RBP12.81□□□□□ -0.36
HMGN1-203ENST00000380748 A8MWP6 167 aa12.8□□□□□ -0.36
HMGN1-203ENST00000380748 DYNC1I1O14576 645 aa12.8□□□□□ -0.36
HMGN1-203ENST00000380748 XRCC3O43542 346 aa12.8□□□□□ -0.36
HMGN1-203ENST00000380748 SCTP09683 121 aa12.8□□□□□ -0.36
HMGN1-203ENST00000380748 HTR2CP28335 458 aa12.8□□□□□ -0.36
HMGN1-203ENST00000380748 RBMS2Q15434 407 aaKnown RBP12.8□□□□□ -0.36
HMGN1-203ENST00000380748 TMEM177Q53S58 311 aa12.8□□□□□ -0.36
HMGN1-203ENST00000380748 C19orf35Q6ZS72 473 aa12.8□□□□□ -0.36
HMGN1-203ENST00000380748 ZFP41Q8N8Y5 198 aa12.8□□□□□ -0.36
HMGN1-203ENST00000380748 ACOT12Q8WYK0 555 aa12.8□□□□□ -0.36
HMGN1-203ENST00000380748 NICN1Q9BSH3 213 aa12.8□□□□□ -0.36
HMGN1-203ENST00000380748 ORC6Q9Y5N6 252 aa12.8□□□□□ -0.36
HMGN1-203ENST00000380748 HSPG2P98160 4391 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 KIR2DL5BA0A0G2JN68 375 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 KIR2DL5BA0A0G2JPC4 375 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 EI24O14681 340 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 IFNA4P05014 189 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 RPL35AP18077 110 aaKnown RBP12.79□□□□□ -0.36
HMGN1-203ENST00000380748 FCGR2BP31994 310 aaPredicted RBP12.79□□□□□ -0.36
HMGN1-203ENST00000380748 ARL3P36405 182 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 YIF1BQ5BJH7 314 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 FAM209BQ5JX69 171 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 C10orf55Q5SWW7 151 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 KIR2DL5AQ8N109 375 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 OR2C3Q8N628 320 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 KIR2DL5BQ8NHK3 375 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 RHOXF1Q8NHV9 184 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 PGLYRP3Q96LB9 341 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 CCDC140Q96MF4 163 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 Q96MT0 163 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 BABAM2Q9NXR7 383 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 RPL36Q9Y3U8 105 aaKnown RBP12.79□□□□□ -0.36
HMGN1-203ENST00000380748 S4R3C0 116 aa12.79□□□□□ -0.36
HMGN1-203ENST00000380748 IGKV1-6A0A0C4DH72 117 aa12.78□□□□□ -0.36
HMGN1-203ENST00000380748 RPS27AP62979 156 aaKnown RBP12.78□□□□□ -0.36
HMGN1-203ENST00000380748 CLEC19AQ6UXS0 136 aa12.78□□□□□ -0.36
HMGN1-203ENST00000380748 TMPRSS11AQ6ZMR5 421 aa12.78□□□□□ -0.36
HMGN1-203ENST00000380748 RBPMS2Q6ZRY4 209 aaKnown RBP12.78□□□□□ -0.36
HMGN1-203ENST00000380748 TTC9CQ8N5M4 171 aa12.78□□□□□ -0.36
HMGN1-203ENST00000380748 TEX45Q8NA69 505 aa12.78□□□□□ -0.36
HMGN1-203ENST00000380748 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.78□□□□□ -0.36
HMGN1-203ENST00000380748 C11orf45Q8TAV5 145 aa12.78□□□□□ -0.36
HMGN1-203ENST00000380748 C2CD4CQ8TF44 421 aa12.78□□□□□ -0.36
HMGN1-203ENST00000380748 C5orf30Q96GV9 206 aa12.78□□□□□ -0.36
HMGN1-203ENST00000380748 UQCC2Q9BRT2 126 aa12.78□□□□□ -0.36
HMGN1-203ENST00000380748 KCNK15Q9H427 330 aa12.78□□□□□ -0.36
HMGN1-203ENST00000380748 FGF20Q9NP95 211 aaPredicted RBP12.78□□□□□ -0.36
HMGN1-203ENST00000380748 RDH8Q9NYR8 311 aa12.78□□□□□ -0.36
HMGN1-203ENST00000380748 GHRLQ9UBU3 117 aa12.78□□□□□ -0.36
HMGN1-203ENST00000380748 APLNQ9ULZ1 77 aa12.78□□□□□ -0.36
HMGN1-203ENST00000380748 TRBV6-6A0A0A6YYG2 114 aa12.77□□□□□ -0.37
HMGN1-203ENST00000380748 TRAV25A0A0B4J276 109 aa12.77□□□□□ -0.37
HMGN1-203ENST00000380748 S1PR2O95136 353 aa12.77□□□□□ -0.37
HMGN1-203ENST00000380748 UBE2KP61086 200 aa12.77□□□□□ -0.37
HMGN1-203ENST00000380748 CBX3Q13185 183 aa12.77□□□□□ -0.37
HMGN1-203ENST00000380748 VMA21Q3ZAQ7 101 aa12.77□□□□□ -0.37
HMGN1-203ENST00000380748 FAM106AQ4KMX7 169 aa12.77□□□□□ -0.37
HMGN1-203ENST00000380748 GVQW1Q8N7I0 195 aa12.77□□□□□ -0.37
HMGN1-203ENST00000380748 APH1BQ8WW43 257 aa12.77□□□□□ -0.37
HMGN1-203ENST00000380748 DERL3Q96Q80 235 aa12.77□□□□□ -0.37
HMGN1-203ENST00000380748 SLC29A1Q99808 456 aa12.77□□□□□ -0.37
HMGN1-203ENST00000380748 TMEM59Q9BXS4 323 aa12.77□□□□□ -0.37
HMGN1-203ENST00000380748 MFFQ9GZY8 342 aa12.77□□□□□ -0.37
HMGN1-203ENST00000380748 OR2D2Q9H210 308 aa12.77□□□□□ -0.37
HMGN1-203ENST00000380748 SDHAF2Q9NX18 166 aa12.77□□□□□ -0.37
HMGN1-203ENST00000380748 AK3Q9UIJ7 227 aa12.77□□□□□ -0.37
HMGN1-203ENST00000380748 FBXL7Q9UJT9 491 aa12.77□□□□□ -0.37
HMGN1-203ENST00000380748 A0A0A6YYD4 124 aa12.76□□□□□ -0.37
HMGN1-203ENST00000380748 MAP2K4P45985 399 aa12.76□□□□□ -0.37
HMGN1-203ENST00000380748 TCTAP57738 103 aa12.76□□□□□ -0.37
HMGN1-203ENST00000380748 TAGLNQ01995 201 aaKnown RBP12.76□□□□□ -0.37
HMGN1-203ENST00000380748 SMN1Q16637 294 aaKnown RBP12.76□□□□□ -0.37
HMGN1-203ENST00000380748 RTL8BQ17RB0 113 aa12.76□□□□□ -0.37
HMGN1-203ENST00000380748 ODF3L2Q3SX64 289 aa12.76□□□□□ -0.37
HMGN1-203ENST00000380748 OR4A47Q6IF82 309 aa12.76□□□□□ -0.37
HMGN1-203ENST00000380748 UNQ9165/PRO28630Q6UXU0 137 aa12.76□□□□□ -0.37
HMGN1-203ENST00000380748 SLC38A6Q8IZM9 456 aa12.76□□□□□ -0.37
HMGN1-203ENST00000380748 NKAIN3Q8N8D7 197 aa12.76□□□□□ -0.37
HMGN1-203ENST00000380748 SPIN2AQ99865 258 aa12.76□□□□□ -0.37
HMGN1-203ENST00000380748 SPIN2BQ9BPZ2 258 aa12.76□□□□□ -0.37
HMGN1-203ENST00000380748 ZNF430Q9H8G1 570 aaPredicted RBP12.76□□□□□ -0.37
HMGN1-203ENST00000380748 MAP6D1Q9H9H5 199 aa12.76□□□□□ -0.37
HMGN1-203ENST00000380748 PLEKHJ1Q9NW61 149 aa12.76□□□□□ -0.37
HMGN1-203ENST00000380748 HMX3A6NHT5 357 aa12.75□□□□□ -0.37
HMGN1-203ENST00000380748 IGLL5B9A064 214 aa12.75□□□□□ -0.37
HMGN1-203ENST00000380748 UNC119Q13432 240 aa12.75□□□□□ -0.37
HMGN1-203ENST00000380748 ZNF585BQ52M93 769 aa12.75□□□□□ -0.37
HMGN1-203ENST00000380748 CEACAM19Q7Z692 300 aa12.75□□□□□ -0.37
HMGN1-203ENST00000380748 TM2D1Q9BX74 207 aa12.75□□□□□ -0.37
HMGN1-203ENST00000380748 RIMS4Q9H426 269 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-203ENST00000380748 Q9N2K0 584 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms