RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 Q0VG73 95 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 KIR3DS1Q14943 382 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 PRSS53Q2L4Q9 553 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 GAGE13Q4V321 117 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 OR4A16Q8NH70 328 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 FAM110AQ9BQ89 295 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 RTBDNQ9BSG5 229 aaPredicted RBP10.12□□□□□ -0.79
NPHP4-202ENST00000378161 ZNF391Q9UJN7 358 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 MCTS1Q9ULC4 181 aaKnown RBP10.12□□□□□ -0.79
NPHP4-202ENST00000378161 OTOFQ9HC10 1997 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 TMEM189A5PLL7 270 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 CFIP05156 583 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 RHOBP62745 196 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 LRRC75BQ2VPJ9 315 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 ELSPBP1Q96BH3 223 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 CLEC7AQ9BXN2 247 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 TRIOBPQ9H2D6 2365 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 YLPM1P49750 1951 aaKnown RBP10.11□□□□□ -0.79
NPHP4-202ENST00000378161 A0A0G2JMZ2 1700 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 LRRC37A2A6NM11 1700 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 PDCD11Q14690 1871 aaKnown RBP10.11□□□□□ -0.79
NPHP4-202ENST00000378161 KLF7O75840 302 aaPredicted RBP10.11□□□□□ -0.79
NPHP4-202ENST00000378161 CD226Q15762 336 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 AGMATQ9BSE5 352 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 MS4A6AQ9H2W1 248 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 NPVFQ9HCQ7 196 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 PGPEP1Q9NXJ5 209 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 UPK3AO75631 287 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 AMY1AP04745 511 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 NMUP48645 174 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 TMPRSS3P57727 454 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 MFAP5Q13361 173 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 ZNF141Q15928 474 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 PRSS8Q16651 343 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 ALKBH6Q3KRA9 238 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 TMEM196Q5HYL7 178 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 LSM10Q969L4 123 aaKnown RBP10.11□□□□□ -0.79
NPHP4-202ENST00000378161 RNF183Q96D59 192 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 DAZAP1Q96EP5 407 aaKnown RBP10.11□□□□□ -0.79
NPHP4-202ENST00000378161 TRAV38-1A0A0B4J264 116 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 NUPR1O60356 82 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 ISG15P05161 165 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 CSN1S1P47710 185 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 DOK3Q7L591 496 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 FGF11Q92914 225 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 DUSP23Q9BVJ7 150 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 ANXA10Q9UJ72 324 aa10.11□□□□□ -0.79
NPHP4-202ENST00000378161 A0A1W2PP11 408 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 LMO1P25800 156 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 ETDBQ3ZM63 59 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 OR51E1Q8TCB6 317 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 ABHD14BQ96IU4 210 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 SYNGR1O43759 233 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 P04436 131 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 VDAC1P21796 283 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 DNM1P46Q6ZS02 220 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 RASL10BQ96S79 203 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 ERRFI1Q9UJM3 462 aaPredicted RBP10.1□□□□□ -0.79
NPHP4-202ENST00000378161 PSG8Q9UQ74 426 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 BRCA1P38398 1863 aaKnown RBP10.1□□□□□ -0.79
NPHP4-202ENST00000378161 HS3ST1O14792 307 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 TGFAP01135 160 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 SCGB1C2P0DMR2 95 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 FUT7Q11130 342 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.1□□□□□ -0.79
NPHP4-202ENST00000378161 PRSS41Q7RTY9 318 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 A0A1W2PQM1 296 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 FRG2CA6NGY1 282 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 H3BVH4 76 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 KIR2DS4P43632 304 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 C1orf100Q5SVJ3 147 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 ST8SIA1Q92185 356 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 RAX2Q96IS3 184 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 EMC6Q9BV81 110 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 PHF7Q9BWX1 381 aaPredicted RBP10.1□□□□□ -0.79
NPHP4-202ENST00000378161 PLA2G2EQ9NZK7 142 aa10.1□□□□□ -0.79
NPHP4-202ENST00000378161 PRKNO60260 465 aaPredicted RBP10.09□□□□□ -0.79
NPHP4-202ENST00000378161 CT62P0C5K7 136 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 CRYBB3P26998 211 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 CLDN17P56750 224 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 RPL32P62910 135 aaKnown RBP10.09□□□□□ -0.79
NPHP4-202ENST00000378161 ANKRD37Q7Z713 158 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 GJC3Q8NFK1 279 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 OR51H1Q8NH63 302 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 GRAMD2BQ96HH9 432 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 SGK494Q96LW2 274 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 C12orf49Q9H741 205 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 EGR1P18146 543 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.09□□□□□ -0.79
NPHP4-202ENST00000378161 OR4X2Q8NGF9 303 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 PRSS27Q9BQR3 290 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 MAP1LC3AQ9H492 121 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 C1QTNF9BB2RNN3 333 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 MFAP2P55001 183 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 PLGLB1Q02325 96 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 TPRX1Q8N7U7 411 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 OR2I1PQ8NGU4 316 aa10.09□□□□□ -0.79
NPHP4-202ENST00000378161 FSTP19883 344 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 COLCA1Q6ZS62 124 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 TCF24Q7RTU0 167 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms