RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 PSMB3P49720 205 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 NDUFA6P56556 154 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 LOXL3P58215 753 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 TFF3Q07654 80 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 MSMPQ1L6U9 139 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 TMEM241Q24JQ0 296 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 Q3ZCU0 254 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 FFAR4Q5NUL3 377 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 IGF2-ASQ6U949 168 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 OR52E5Q8NH55 327 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 MBD3L2Q8NHZ7 208 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 ABHD5Q8WTS1 349 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 RAB24Q969Q5 203 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 R3HDM4Q96D70 268 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 SNX22Q96L94 193 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 OPN3Q9H1Y3 402 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 NCOR1P1Q9H4R4 102 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 GAB2Q9UQC2 676 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 PTPRBP23467 1997 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 USF3Q68DE3 2245 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 DEFB108AA8MXU0 73 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 SEC14L6B5MCN3 397 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 F2RL2O00254 374 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 MGST3O14880 152 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 PFN1P07737 140 aaKnown RBP9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 FTH1P19P0C7X4 201 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 TMPRSS3P57727 454 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 SSX3Q99909 188 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 SMIM7Q9BQ49 75 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 GGACTQ9BVM4 153 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 QTRT1Q9BXR0 403 aaKnown RBP9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 SLC25A22Q9H936 323 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 MIOXQ9UGB7 285 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 WDR83OSQ9Y284 106 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 ELOA3CA0A087WX78 387 aaPredicted RBP9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 LINC00587B1AMM8 73 aa9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 C17orf112F2Z3M2 114 aa9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 ITGB1BP1O14713 200 aa9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 LHBP01229 141 aa9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 IGHV3-13P01766 116 aa9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 IGHV2-70P01814 119 aa9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 OR9G9P0C7N8 305 aa9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 CGB3P0DN86 165 aa9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 CGB7P0DN87 165 aa9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 PLA2G5P39877 138 aa9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 GPR12P47775 334 aa9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 C3orf36Q3SXR2 165 aa9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 SPNS3Q6ZMD2 512 aa9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 GCSAMQ8N6F7 178 aa9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 OR2Z1Q8NG97 314 aa9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 PPP1R35Q8TAP8 253 aa9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 GAR1Q9NY12 217 aaKnown RBP9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 OR6C3Q9NZP0 311 aa9.75□□□□□ -0.85
TNFRSF9-201ENST00000377507 TRGC1P0CF51 173 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 SPCS3P61009 180 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 RPL23P62829 140 aaKnown RBP9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 ZNF709Q8N972 641 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 DEFB124Q8NES8 71 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 FRZBQ92765 325 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 RAB1CQ92928 201 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 CHD3Q12873 2000 aaKnown RBP9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 SMCO3A2RU48 225 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 PRSS46E5RG02 174 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 HMGB3O15347 200 aaKnown RBP9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 MPDU1O75352 247 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 RBMXL2O75526 392 aaKnown RBP9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 CD1BP29016 333 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 VDAC2P45880 294 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 ZNF134P52741 427 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 EDDM3AQ14507 147 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 BSXQ3C1V8 233 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 ACOT6Q3I5F7 207 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 LRP11Q86VZ4 500 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 HIST3H2BBQ8N257 126 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 Q8TCH9 128 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 DDB2Q92466 427 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 IFI27L2Q9H2X8 130 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 PARLQ9H300 379 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 GNG12Q9UBI6 72 aa9.74□□□□□ -0.85
TNFRSF9-201ENST00000377507 FRYQ5TBA9 3013 aa9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 CACNA1DQ01668 2161 aa9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 SPAARA0A1B0GVQ0 90 aa9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 FCGR3BO75015 233 aa9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 VENTXO95231 258 aa9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 GLRXP35754 106 aa9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 RPP30P78346 268 aaKnown RBP9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 NKX6-1P78426 367 aaPredicted RBP9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 HNF4GQ14541 408 aa9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 SPINK9Q5DT21 86 aa9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 PYY3Q5JQD4 70 aa9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 TIMM23BQ5SRD1 257 aa9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 TGIF2LYQ8IUE0 185 aa9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 OR51G1Q8NGK1 321 aa9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 GATAD1Q8WUU5 269 aa9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 SRD5A3Q9H8P0 318 aa9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 PARD6AQ9NPB6 346 aa9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 DUSP13Q9UII6 198 aa9.73□□□□□ -0.85
TNFRSF9-201ENST00000377507 IGLV3-9A0A075B6K5 115 aa9.72□□□□□ -0.85
TNFRSF9-201ENST00000377507 PPP1R2P9O14990 202 aa9.72□□□□□ -0.85
TNFRSF9-201ENST00000377507 SOD3P08294 240 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms