RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 F2RP25116 425 aa10.26□□□□□ -0.77
VRK3-202ENST00000377011 SULT1A1P50225 295 aa10.26□□□□□ -0.77
VRK3-202ENST00000377011 SELENOVP59797 346 aa10.26□□□□□ -0.77
VRK3-202ENST00000377011 RAB2AP61019 212 aa10.26□□□□□ -0.77
VRK3-202ENST00000377011 PDCD1Q15116 288 aa10.26□□□□□ -0.77
VRK3-202ENST00000377011 SOHLH1Q5JUK2 328 aa10.26□□□□□ -0.77
VRK3-202ENST00000377011 Q8IYB0 196 aa10.26□□□□□ -0.77
VRK3-202ENST00000377011 H1FOOQ8IZA3 346 aaPredicted RBP10.26□□□□□ -0.77
VRK3-202ENST00000377011 SUMF2Q8NBJ7 301 aa10.26□□□□□ -0.77
VRK3-202ENST00000377011 OR2Z1Q8NG97 314 aa10.26□□□□□ -0.77
VRK3-202ENST00000377011 CLDND2Q8NHS1 167 aa10.26□□□□□ -0.77
VRK3-202ENST00000377011 NEK7Q8TDX7 302 aa10.26□□□□□ -0.77
VRK3-202ENST00000377011 RBMXL1Q96E39 390 aaKnown RBP10.26□□□□□ -0.77
VRK3-202ENST00000377011 RAB40CQ96S21 281 aa10.26□□□□□ -0.77
VRK3-202ENST00000377011 CHODLQ9H9P2 273 aa10.26□□□□□ -0.77
VRK3-202ENST00000377011 OR2W1Q9Y3N9 320 aa10.26□□□□□ -0.77
VRK3-202ENST00000377011 A0A087WWC5 75 aa10.25□□□□□ -0.77
VRK3-202ENST00000377011 IGKV1D-13A0A0B4J2D9 117 aa10.25□□□□□ -0.77
VRK3-202ENST00000377011 IGKV1-6A0A0C4DH72 117 aa10.25□□□□□ -0.77
VRK3-202ENST00000377011 IGHV1-69-2A0A0G2JMI3 117 aa10.25□□□□□ -0.77
VRK3-202ENST00000377011 C3orf80F5H4A9 247 aa10.25□□□□□ -0.77
VRK3-202ENST00000377011 AP4M1O00189 453 aa10.25□□□□□ -0.77
VRK3-202ENST00000377011 WRBO00258 174 aa10.25□□□□□ -0.77
VRK3-202ENST00000377011 PPIHO43447 177 aaKnown RBP10.25□□□□□ -0.77
VRK3-202ENST00000377011 SSSCA1O60232 199 aa10.25□□□□□ -0.77
VRK3-202ENST00000377011 PGLYRP1O75594 196 aaPredicted RBP10.25□□□□□ -0.77
VRK3-202ENST00000377011 IGKV1-13P0DP09 117 aa10.25□□□□□ -0.77
VRK3-202ENST00000377011 CD200P41217 278 aa10.25□□□□□ -0.77
VRK3-202ENST00000377011 PLPPR1Q8TBJ4 325 aa10.25□□□□□ -0.77
VRK3-202ENST00000377011 ITLN1Q8WWA0 313 aa10.25□□□□□ -0.77
VRK3-202ENST00000377011 LSM10Q969L4 123 aaKnown RBP10.25□□□□□ -0.77
VRK3-202ENST00000377011 ATP5SQ99766 215 aa10.25□□□□□ -0.77
VRK3-202ENST00000377011 SAP30LQ9HAJ7 183 aa10.25□□□□□ -0.77
VRK3-202ENST00000377011 TRAV1-1A0A0B4J248 108 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 RBFOX3A6NFN3 312 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 J3QT63 122 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 RAC2P15153 192 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 S100PP25815 95 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 GPR6P46095 362 aaPredicted RBP10.24□□□□□ -0.77
VRK3-202ENST00000377011 FHITP49789 147 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 RIPPLY3P57055 190 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 LMO4P61968 165 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 RPL23AP62750 156 aaKnown RBP10.24□□□□□ -0.77
VRK3-202ENST00000377011 AKIRIN2Q53H80 203 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 KRBOX4Q5JUW0 171 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 STX12Q86Y82 276 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 FAM58AQ8N1B3 248 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 OR10G4Q8NGN3 311 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 OR5C1Q8NGR4 320 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 OR10J5Q8NHC4 309 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 CCL17Q92583 94 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 PARP12Q9H0J9 701 aaKnown RBP10.24□□□□□ -0.77
VRK3-202ENST00000377011 OR51M1Q9H341 326 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 LPAR2Q9HBW0 351 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 CCL28Q9NRJ3 127 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 WNK2Q9Y3S1 2297 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 A0A1W2PPH5 198 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 CXorf65A6NEN9 183 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 HSPB1P04792 205 aaKnown RBP10.24□□□□□ -0.77
VRK3-202ENST00000377011 CD55P08174 381 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 ADH4P08319 380 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 PPP1CCP36873 323 aaKnown RBP10.24□□□□□ -0.77
VRK3-202ENST00000377011 TNFAIP6P98066 277 aaPredicted RBP10.24□□□□□ -0.77
VRK3-202ENST00000377011 FABP9Q0Z7S8 132 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 CXorf66Q5JRM2 361 aaPredicted RBP10.24□□□□□ -0.77
VRK3-202ENST00000377011 FAM201AQ5SY85 155 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 SPSB3Q6PJ21 355 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 ETV3LQ6ZN32 361 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 CD300LFQ8TDQ1 290 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 OR2V2Q96R30 315 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 TMPRSS5Q9H3S3 457 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 RNF150Q9ULK6 438 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 WIPI2Q9Y4P8 454 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 WSB1Q9Y6I7 421 aa10.24□□□□□ -0.77
VRK3-202ENST00000377011 TRAV24A0A0B4J272 114 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 A6NLC8 198 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 KIAA1324LA8MWY0 1029 aaPredicted RBP10.23□□□□□ -0.77
VRK3-202ENST00000377011 IQCF6A8MYZ5 107 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.23□□□□□ -0.77
VRK3-202ENST00000377011 HSD17B6O14756 317 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 SYNGR1O43759 233 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 FABP1P07148 127 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 OR8U8P0C7N1 319 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 DYNLT3P51808 116 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 TAS2R30P59541 319 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 ZNF506Q5JVG8 444 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 AKR1C8PQ5T2L2 129 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 NANPQ8TBE9 248 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 YPEL4Q96NS1 127 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 RTL8AQ9BWD3 113 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 PARD6GQ9BYG4 376 aaPredicted RBP10.23□□□□□ -0.77
VRK3-202ENST00000377011 OR51I2Q9H344 312 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 SIRT7Q9NRC8 400 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 FBXO7Q9Y3I1 522 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 COL6A5A8TX70 2615 aa10.23□□□□□ -0.77
VRK3-202ENST00000377011 TXNL1O43396 289 aa10.22□□□□□ -0.77
VRK3-202ENST00000377011 CRLF1O75462 422 aa10.22□□□□□ -0.77
VRK3-202ENST00000377011 OR2C1O95371 312 aa10.22□□□□□ -0.77
VRK3-202ENST00000377011 SERPINE2P07093 398 aa10.22□□□□□ -0.77
VRK3-202ENST00000377011 MRPS11P82912 194 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms