RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 NDRG3Q9UGV2 375 aa17.9■□□□□ 0.46
RNF39-202ENST00000376751 YLPM1P49750 1951 aaKnown RBP17.9■□□□□ 0.46
RNF39-202ENST00000376751 TRGV10A0A0A0MS01 117 aa17.9■□□□□ 0.46
RNF39-202ENST00000376751 RBMXL2O75526 392 aaKnown RBP17.9■□□□□ 0.46
RNF39-202ENST00000376751 SSX9Q7RTT3 188 aa17.9■□□□□ 0.46
RNF39-202ENST00000376751 DDB2Q92466 427 aa17.9■□□□□ 0.46
RNF39-202ENST00000376751 WFIKKN1Q96NZ8 548 aa17.9■□□□□ 0.46
RNF39-202ENST00000376751 MMP23AO75900 390 aa17.89■□□□□ 0.45
RNF39-202ENST00000376751 HPRT1P00492 218 aa17.89■□□□□ 0.45
RNF39-202ENST00000376751 PLA2G5P39877 138 aa17.89■□□□□ 0.45
RNF39-202ENST00000376751 VKORC1L1Q8N0U8 176 aa17.89■□□□□ 0.45
RNF39-202ENST00000376751 CLDND2Q8NHS1 167 aa17.89■□□□□ 0.45
RNF39-202ENST00000376751 C20orf24Q9BUV8 137 aa17.89■□□□□ 0.45
RNF39-202ENST00000376751 MSRB2Q9Y3D2 182 aa17.89■□□□□ 0.45
RNF39-202ENST00000376751 POLEQ07864 2286 aa17.88■□□□□ 0.45
RNF39-202ENST00000376751 SAA2-SAA4A0A096LPE2 208 aa17.88■□□□□ 0.45
RNF39-202ENST00000376751 TRAV1-1A0A0B4J248 108 aa17.88■□□□□ 0.45
RNF39-202ENST00000376751 CEBPZOSA8MTT3 80 aa17.88■□□□□ 0.45
RNF39-202ENST00000376751 ITGB1BP1O14713 200 aa17.88■□□□□ 0.45
RNF39-202ENST00000376751 SAA2P0DJI9 122 aaPredicted RBP17.88■□□□□ 0.45
RNF39-202ENST00000376751 IRF2P14316 349 aa17.88■□□□□ 0.45
RNF39-202ENST00000376751 ZNF439Q8NDP4 499 aa17.88■□□□□ 0.45
RNF39-202ENST00000376751 RBFOX2O43251 390 aaKnown RBP eCLIP17.88■□□□□ 0.45
RNF39-202ENST00000376751 SCAF4O95104 1147 aaKnown RBP17.88■□□□□ 0.45
RNF39-202ENST00000376751 HBE1P02100 147 aa17.88■□□□□ 0.45
RNF39-202ENST00000376751 SRP19P09132 144 aaKnown RBP17.88■□□□□ 0.45
RNF39-202ENST00000376751 ELLP55199 621 aaPredicted RBP17.88■□□□□ 0.45
RNF39-202ENST00000376751 AARDQ4LEZ3 155 aa17.88■□□□□ 0.45
RNF39-202ENST00000376751 ZNF506Q5JVG8 444 aa17.88■□□□□ 0.45
RNF39-202ENST00000376751 RBMXL1Q96E39 390 aaKnown RBP17.88■□□□□ 0.45
RNF39-202ENST00000376751 RCC1LQ96I51 464 aaKnown RBP17.88■□□□□ 0.45
RNF39-202ENST00000376751 KALRNO60229 2985 aa17.87■□□□□ 0.45
RNF39-202ENST00000376751 SNRNP70P08621 437 aaKnown RBP17.87■□□□□ 0.45
RNF39-202ENST00000376751 FBP1P09467 338 aa17.87■□□□□ 0.45
RNF39-202ENST00000376751 HNF4GQ14541 408 aa17.87■□□□□ 0.45
RNF39-202ENST00000376751 PRAMEF5Q5TYX0 476 aa17.87■□□□□ 0.45
RNF39-202ENST00000376751 CIB3Q96Q77 187 aaPredicted RBP17.87■□□□□ 0.45
RNF39-202ENST00000376751 ZNF251Q9BRH9 671 aa17.87■□□□□ 0.45
RNF39-202ENST00000376751 TMEM147Q9BVK8 224 aa17.87■□□□□ 0.45
RNF39-202ENST00000376751 SMDT1Q9H4I9 107 aa17.87■□□□□ 0.45
RNF39-202ENST00000376751 RPS10P5Q9NQ39 176 aa17.87■□□□□ 0.45
RNF39-202ENST00000376751 TRAV3A0A0B4J244 114 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 C7orf77A4D0Y5 90 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 M0R036 132 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 FCN3O75636 299 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 RAB7AP51149 207 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 RXFP4Q8TDU9 374 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 RND1Q92730 232 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 CLCC1Q96S66 551 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 S1PR3Q99500 378 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 IDI2-AS1Q9NZ38 188 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 GAB2Q9UQC2 676 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 SPTA1P02549 2419 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 C15orf62A8K5M9 175 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 TNFRSF1AP19438 455 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 SERF2P84101 59 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 TMEM41BQ5BJD5 291 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 LCN15Q6UWW0 184 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 DMRTC2Q8IXT2 367 aaPredicted RBP17.86■□□□□ 0.45
RNF39-202ENST00000376751 KDF1Q8NAX2 398 aaPredicted RBP17.86■□□□□ 0.45
RNF39-202ENST00000376751 NEUROG1Q92886 237 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 DIRC2Q96SL1 478 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 LINC00574Q9H8X3 128 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 SMCO4Q9NRQ5 59 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 PRELID3BQ9Y3B1 194 aa17.86■□□□□ 0.45
RNF39-202ENST00000376751 ZNF729A6NN14 1252 aaPredicted RBP17.85■□□□□ 0.45
RNF39-202ENST00000376751 FAM90A9PA6NNJ1 464 aa17.85■□□□□ 0.45
RNF39-202ENST00000376751 COLCA2A8K830 154 aa17.85■□□□□ 0.45
RNF39-202ENST00000376751 EIF3GO75821 320 aaKnown RBP eCLIP17.85■□□□□ 0.45
RNF39-202ENST00000376751 IGKV1D-33P01593 117 aa17.85■□□□□ 0.45
RNF39-202ENST00000376751 IGKV1-33P01594 117 aa17.85■□□□□ 0.45
RNF39-202ENST00000376751 DAOP14920 347 aa17.85■□□□□ 0.45
RNF39-202ENST00000376751 GNG10P50151 68 aa17.85■□□□□ 0.45
RNF39-202ENST00000376751 FGF8P55075 233 aaPredicted RBP17.85■□□□□ 0.45
RNF39-202ENST00000376751 TLE1Q04724 770 aa17.85■□□□□ 0.45
RNF39-202ENST00000376751 TFF3Q07654 80 aa17.85■□□□□ 0.45
RNF39-202ENST00000376751 SOHLH1Q5JUK2 328 aa17.85■□□□□ 0.45
RNF39-202ENST00000376751 MBD3L1Q8WWY6 194 aa17.85■□□□□ 0.45
RNF39-202ENST00000376751 CORO2AQ92828 525 aa17.85■□□□□ 0.45
RNF39-202ENST00000376751 RAB9BQ9NP90 201 aa17.85■□□□□ 0.45
RNF39-202ENST00000376751 LOC102723971A0A1B0GUV8 181 aa17.84■□□□□ 0.45
RNF39-202ENST00000376751 SHISA9B4DS77 424 aa17.84■□□□□ 0.45
RNF39-202ENST00000376751 TMPRSS2O15393 492 aa17.84■□□□□ 0.45
RNF39-202ENST00000376751 RAB2AP61019 212 aa17.84■□□□□ 0.45
RNF39-202ENST00000376751 RBPJQ06330 500 aa17.84■□□□□ 0.45
RNF39-202ENST00000376751 ZNF787Q6DD87 383 aa17.84■□□□□ 0.45
RNF39-202ENST00000376751 ACSM6Q6P461 480 aa17.84■□□□□ 0.45
RNF39-202ENST00000376751 TIMM9Q9Y5J7 89 aa17.84■□□□□ 0.45
RNF39-202ENST00000376751 KIR2DS2P43631 304 aa17.84■□□□□ 0.45
RNF39-202ENST00000376751 RELBQ01201 579 aa17.84■□□□□ 0.45
RNF39-202ENST00000376751 ATP6V1FQ16864 119 aa17.84■□□□□ 0.45
RNF39-202ENST00000376751 CENPVQ7Z7K6 275 aaPredicted RBP17.84■□□□□ 0.45
RNF39-202ENST00000376751 LYG1Q8N1E2 194 aa17.84■□□□□ 0.45
RNF39-202ENST00000376751 CYB561D1Q8N8Q1 229 aa17.84■□□□□ 0.45
RNF39-202ENST00000376751 ZNF383Q8NA42 475 aa17.84■□□□□ 0.45
RNF39-202ENST00000376751 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.84■□□□□ 0.45
RNF39-202ENST00000376751 OR10P1Q8NGE3 313 aa17.84■□□□□ 0.45
RNF39-202ENST00000376751 SAP30LQ9HAJ7 183 aa17.84■□□□□ 0.45
RNF39-202ENST00000376751 TMEM140Q9NV12 185 aa17.84■□□□□ 0.45
RNF39-202ENST00000376751 ZNRD1Q9P1U0 126 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms