RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 PDZD9Q8IXQ8 264 aa10.29□□□□□ -0.76
CLCN6-206ENST00000376496 TNCP24821 2201 aa10.29□□□□□ -0.76
CLCN6-206ENST00000376496 IGHV1-8P0DP01 117 aa10.28□□□□□ -0.76
CLCN6-206ENST00000376496 SLC25A6P12236 298 aa10.28□□□□□ -0.76
CLCN6-206ENST00000376496 COX7A1P24310 79 aa10.28□□□□□ -0.76
CLCN6-206ENST00000376496 UBE2KP61086 200 aa10.28□□□□□ -0.76
CLCN6-206ENST00000376496 TNFRSF9Q07011 255 aa10.28□□□□□ -0.76
CLCN6-206ENST00000376496 ARL16Q0P5N6 197 aa10.28□□□□□ -0.76
CLCN6-206ENST00000376496 HNF4GQ14541 408 aa10.28□□□□□ -0.76
CLCN6-206ENST00000376496 GPR157Q5UAW9 335 aa10.28□□□□□ -0.76
CLCN6-206ENST00000376496 WDR25Q64LD2 544 aaPredicted RBP10.28□□□□□ -0.76
CLCN6-206ENST00000376496 PSENENQ9NZ42 101 aa10.28□□□□□ -0.76
CLCN6-206ENST00000376496 PRELID3BQ9Y3B1 194 aa10.28□□□□□ -0.76
CLCN6-206ENST00000376496 OR10X1Q8NGY0 326 aa10.28□□□□□ -0.76
CLCN6-206ENST00000376496 RAB1CQ92928 201 aa10.28□□□□□ -0.76
CLCN6-206ENST00000376496 ITGB1BP2Q9UKP3 347 aa10.28□□□□□ -0.76
CLCN6-206ENST00000376496 PPIAL4CA0A0B4J2A2 164 aa10.27□□□□□ -0.76
CLCN6-206ENST00000376496 TOR1AO14656 332 aa10.27□□□□□ -0.76
CLCN6-206ENST00000376496 HPRT1P00492 218 aa10.27□□□□□ -0.76
CLCN6-206ENST00000376496 PPIAL4GP0DN37 164 aa10.27□□□□□ -0.76
CLCN6-206ENST00000376496 RRASP10301 218 aa10.27□□□□□ -0.76
CLCN6-206ENST00000376496 PAX6P26367 422 aa10.27□□□□□ -0.76
CLCN6-206ENST00000376496 ABHD12Q8N2K0 398 aa10.27□□□□□ -0.76
CLCN6-206ENST00000376496 ZNF525Q8N782 197 aa10.27□□□□□ -0.76
CLCN6-206ENST00000376496 OR8B3Q8NGG8 313 aa10.27□□□□□ -0.76
CLCN6-206ENST00000376496 NEU4Q8WWR8 484 aaPredicted RBP10.27□□□□□ -0.76
CLCN6-206ENST00000376496 OR8B2Q96RD0 313 aa10.27□□□□□ -0.76
CLCN6-206ENST00000376496 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.27□□□□□ -0.76
CLCN6-206ENST00000376496 ONECUT1Q9UBC0 465 aa10.27□□□□□ -0.76
CLCN6-206ENST00000376496 VPS13CQ709C8 3753 aa10.27□□□□□ -0.76
CLCN6-206ENST00000376496 IGHV3-72A0A0B4J1Y9 119 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 A1L4Q6 167 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 J3QR06 171 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 ITGB1BP1O14713 200 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 TAAR5O14804 337 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 S100A1P23297 94 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 RUNX1Q01196 453 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 HAPLN4Q86UW8 402 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 TIMD4Q96H15 378 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 TMEM140Q9NV12 185 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 OPN1MWP04001 364 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 FAM157CP0CG43 387 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 OPN1MW2P0DN77 364 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 OPN1MW3P0DN78 364 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 FHITP49789 147 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 RPL23AP62750 156 aaKnown RBP10.27□□□□□ -0.77
CLCN6-206ENST00000376496 OR1S2Q8NGQ3 325 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 NRGNQ92686 78 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 PHYHIPLQ96FC7 376 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 NEIL1Q96FI4 390 aaPredicted RBP10.27□□□□□ -0.77
CLCN6-206ENST00000376496 SLC25A32Q9H2D1 315 aa10.27□□□□□ -0.77
CLCN6-206ENST00000376496 SRRM4A7MD48 611 aaKnown RBP10.26□□□□□ -0.77
CLCN6-206ENST00000376496 H7C2Y5 167 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 JTBO76095 146 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 ARF6P62330 175 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 OR8G2PQ6IF36 304 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 CD300LFQ8TDQ1 290 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 RHOVQ96L33 236 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 REG4Q9BYZ8 158 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 CHODLQ9H9P2 273 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 BARX1Q9HBU1 254 aaPredicted RBP10.26□□□□□ -0.77
CLCN6-206ENST00000376496 SIRT7Q9NRC8 400 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 SLC35D1Q9NTN3 355 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 HSPB7Q9UBY9 170 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 CSMD2Q7Z408 3487 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 A0A1W2PRD5 423 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 A0A1W2PRF3 423 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 A0A1W2PRM7 423 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 CEBPZOSA8MTT3 80 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 ZNF705EA8MWA4 302 aaPredicted RBP10.26□□□□□ -0.77
CLCN6-206ENST00000376496 I3L521 148 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 IFNA17P01571 189 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 THBS3P49746 956 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 GNB2P62879 340 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 OR4S2Q8NH73 311 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 OR4C12Q96R67 309 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 RAB40CQ96S21 281 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 SLC25A31Q9H0C2 315 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 AUP1Q9Y679 476 aa10.26□□□□□ -0.77
CLCN6-206ENST00000376496 NQO2P16083 231 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 GPR6P46095 362 aaPredicted RBP10.25□□□□□ -0.77
CLCN6-206ENST00000376496 SRSF1Q07955 248 aaKnown RBP eCLIP10.25□□□□□ -0.77
CLCN6-206ENST00000376496 AANATQ16613 207 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 OR4A47Q6IF82 309 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 TCTEX1D1Q8N7M0 179 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 TMEM133Q9H2Q1 129 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 LPAR3Q9UBY5 353 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 PLXNB1O43157 2135 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 MED6O75586 246 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 GAPDHP04406 335 aaKnown RBP10.25□□□□□ -0.77
CLCN6-206ENST00000376496 ERVK-16P61578 105 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 ZNF833PQ6ZTB9 187 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 UBAC2Q8NBM4 344 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.25□□□□□ -0.77
CLCN6-206ENST00000376496 OR13D1Q8NGV5 346 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 OR4A16Q8NH70 328 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 COA4Q9NYJ1 87 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 MIOXQ9UGB7 285 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 GAB2Q9UQC2 676 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 WSB1Q9Y6I7 421 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms