RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 IRF2P14316 349 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 CLDN18P56856 261 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 NHLRC2Q8NBF2 726 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 KLF14Q8TD94 323 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 FAM216AQ8WUB2 273 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 SDF2L1Q9HCN8 221 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 PLSCR2Q9NRY7 297 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 DMRT1Q9Y5R6 373 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 ZGRF1Q86YA3 2104 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 ETV2O00321 342 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 SMIM21Q3B7S5 101 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 ABLIM2Q6H8Q1 611 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 MOGAT3Q86VF5 341 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 FAM122AQ96E09 287 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 QTRT1Q9BXR0 403 aaKnown RBP12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 METRNQ9UJH8 293 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 MARCH11A6NNE9 402 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 C1QTNF9P0C862 333 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 FOLR2P14207 255 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 IER3P46695 156 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 MRPL54Q6P161 138 aaKnown RBP12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 PCSK4Q6UW60 755 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 EDARADDQ8WWZ3 215 aa12.13□□□□□ -0.47
TNFRSF1B-201ENST00000376259 TMEM131Q92545 1883 aa12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 FCN1O00602 326 aa12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 GATA2P23769 480 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 SERF2P84101 59 aa12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 OR13A1Q8NGR1 328 aa12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 OR1P1Q8NH06 330 aa12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 CD1BP29016 333 aa12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 HIST1H2BLQ99880 126 aa12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 CISD1Q9NZ45 108 aaKnown RBP12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 IGHV3-21A0A0B4J1V1 117 aa12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 PLAUP00749 431 aa12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 IGLV3-1P01715 115 aa12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 SELLP14151 372 aa12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 RPL23P62829 140 aaKnown RBP12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 FXYD3Q14802 87 aa12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 LRRC75BQ2VPJ9 315 aa12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 DPPA3Q6W0C5 159 aa12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 CIB3Q96Q77 187 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 IL36GQ9NZH8 169 aa12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 COLQQ9Y215 455 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1B-201ENST00000376259 DSPP15924 2871 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1B-201ENST00000376259 C9orf172C9J069 976 aa12.11□□□□□ -0.47
TNFRSF1B-201ENST00000376259 FAM157AC9JC47 383 aa12.11□□□□□ -0.47
TNFRSF1B-201ENST00000376259 IGKV1-39P01597 117 aa12.11□□□□□ -0.47
TNFRSF1B-201ENST00000376259 MBP02144 154 aa12.11□□□□□ -0.47
TNFRSF1B-201ENST00000376259 IGKV1D-39P04432 117 aa12.11□□□□□ -0.47
TNFRSF1B-201ENST00000376259 CBLN1P23435 193 aa12.11□□□□□ -0.47
TNFRSF1B-201ENST00000376259 FAM90A2PQ658T7 463 aa12.11□□□□□ -0.47
TNFRSF1B-201ENST00000376259 HIST3H2BBQ8N257 126 aa12.11□□□□□ -0.47
TNFRSF1B-201ENST00000376259 NAT8BQ9UHF3 227 aa12.11□□□□□ -0.47
TNFRSF1B-201ENST00000376259 OR5G3P0C626 314 aa12.11□□□□□ -0.47
TNFRSF1B-201ENST00000376259 PRB3Q04118 309 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1B-201ENST00000376259 ZNF600Q6ZNG1 722 aa12.11□□□□□ -0.47
TNFRSF1B-201ENST00000376259 MOB1BQ7L9L4 216 aa12.11□□□□□ -0.47
TNFRSF1B-201ENST00000376259 VN1R17PQ8TDU5 208 aa12.11□□□□□ -0.47
TNFRSF1B-201ENST00000376259 ZNF729A6NN14 1252 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 B4DEV8 164 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 IGKV1D-33P01593 117 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 IGKV1-33P01594 117 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 ARL14EPLP0DKL9 152 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 ZNF726P1Q15940 193 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 VWA1Q6PCB0 445 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 OPN3Q9H1Y3 402 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 SMDT1Q9H4I9 107 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.1□□□□□ -0.472e-8■■■■□ 19.7
TNFRSF1B-201ENST00000376259 LNP1A1A4G5 178 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 LRRC30A6NM36 301 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 CLDN14O95500 239 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 IGHV2-5P01817 119 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 GFRA1P56159 465 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 RPP30P78346 268 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 SRSF6Q13247 344 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 PSG5Q15238 335 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 UNQ6494/PRO21346Q6UXR6 183 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 Q8IYB0 196 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 KLF2Q9Y5W3 355 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 NUP210LQ5VU65 1888 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 ELOA3CA0A087WX78 387 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 DUXBA0A1W2PPF3 345 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 MT-CO2P00403 227 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 GPX4P36969 197 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 PKIAP61925 76 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 PRSS8Q16651 343 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 DBX2Q6ZNG2 339 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 TAAR6Q96RI8 345 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 PARD6AQ9NPB6 346 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 FKBP11Q9NYL4 201 aa12.1□□□□□ -0.47
TNFRSF1B-201ENST00000376259 OOEPA6NGQ2 149 aa12.09□□□□□ -0.47
TNFRSF1B-201ENST00000376259 KBTBD11O94819 623 aa12.09□□□□□ -0.47
TNFRSF1B-201ENST00000376259 ZFP36L1Q07352 338 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1B-201ENST00000376259 ASPHD1Q5U4P2 390 aa12.09□□□□□ -0.47
TNFRSF1B-201ENST00000376259 TGIF2LXQ8IUE1 241 aa12.09□□□□□ -0.47
TNFRSF1B-201ENST00000376259 TPPP3Q9BW30 176 aa12.09□□□□□ -0.47
TNFRSF1B-201ENST00000376259 CEP295Q9C0D2 2601 aa12.09□□□□□ -0.47
TNFRSF1B-201ENST00000376259 IL18BPO95998 194 aa12.09□□□□□ -0.47
TNFRSF1B-201ENST00000376259 MYOD1P15172 320 aa12.09□□□□□ -0.47
TNFRSF1B-201ENST00000376259 ZNF585BQ52M93 769 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms