RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 NPCDR1Q9BY65 106 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 PKIBQ9C010 78 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 C17orf98A8MV24 154 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 NKX2-8O15522 239 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 NUPR1O60356 82 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 TFF1P04155 84 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 COX5AP20674 150 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 IL3RAP26951 378 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 MAGEA5P43359 124 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 BRWD1-AS2P59051 145 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 TMPRSS7Q7RTY8 843 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 MANBALQ9NQG1 85 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 MRPS18CQ9Y3D5 142 aaKnown RBP11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 A0A0U1RQK1 487 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 ZNF320A2RRD8 509 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 RBMXL2O75526 392 aaKnown RBP11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 SYNGR4O95473 234 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 SCGB1D1O95968 90 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 OR3A1P47881 315 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 SPCS3P61009 180 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 ALKBH6Q3KRA9 238 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 LBHQ53QV2 105 aaPredicted RBP11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 CISD2Q8N5K1 135 aaKnown RBP11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 BEND2Q8NDZ0 799 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 OR2M7Q8NG81 312 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 DTD1Q8TEA8 209 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 WDYHV1Q96HA8 205 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 BOKQ9UMX3 212 aaPredicted RBP11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 TRAV38-1A0A0B4J264 116 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 NXPH2O95156 264 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 C1QTNF9P0C862 333 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 ATP5G3P48201 142 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 CNN1P51911 297 aaKnown RBP11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 GNB1P62873 340 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 CST9LP1Q5W188 147 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 MOB1BQ7L9L4 216 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 ZNF709Q8N972 641 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 ZNF114Q8NC26 417 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 NEU1Q99519 415 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 CBLN4Q9NTU7 201 aa11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 MBNL3Q9NUK0 354 aaKnown RBP11.82□□□□□ -0.52
CLCNKA-202ENST00000375692 PSPNO60542 156 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 NDUFB4O95168 129 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 MBP02144 154 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 GRPP07492 148 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 P0C879 139 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 CD33P20138 364 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 SRP14P37108 136 aaKnown RBP11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 NUTF2P61970 127 aaKnown RBP11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 ACOT6Q3I5F7 207 aaPredicted RBP11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 LINC00696Q6ZRV3 163 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 LINC01551Q86U37 167 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 GBGT1Q8N5D6 347 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 SNHG12Q9BXW3 62 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 ZNF703Q9H7S9 590 aaPredicted RBP11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 NEURL1O76050 574 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 TYMSP04818 313 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 MSMO1Q15800 293 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 ATP6V1FQ16864 119 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 MDP1Q86V88 176 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 ZNF645Q8N7E2 425 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 TMEM204Q9BSN7 226 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 MRPL37Q9BZE1 423 aaKnown RBP11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 WIPI2Q9Y4P8 454 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 TRAPPC1Q9Y5R8 145 aa11.81□□□□□ -0.52
CLCNKA-202ENST00000375692 RNF212BA8MTL3 300 aa11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 DLL1O00548 723 aa11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 CELA3BP08861 270 aa11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 GCH1P30793 250 aa11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 ERVK11-1P61568 191 aa11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 KCNIP4Q6PIL6 250 aa11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 TCF23Q7RTU1 214 aa11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 FKBP11Q9NYL4 201 aa11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 C12orf77C9JDV5 145 aa11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 HNF1AP20823 631 aa11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 G0S2P27469 103 aa11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 CDC34P49427 236 aaPredicted RBP11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 CASP6P55212 293 aa11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 RPL15P61313 204 aaKnown RBP11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 AESQ08117 197 aa11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 IQCJQ1A5X6 159 aa11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 LRP11Q86VZ4 500 aa11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 RTL8AQ9BWD3 113 aa11.8□□□□□ -0.52
CLCNKA-202ENST00000375692 SH2D1BO14796 132 aa11.79□□□□□ -0.52
CLCNKA-202ENST00000375692 MLNRO43193 412 aa11.79□□□□□ -0.52
CLCNKA-202ENST00000375692 VENTXO95231 258 aa11.79□□□□□ -0.52
CLCNKA-202ENST00000375692 COL8A2P25067 703 aa11.79□□□□□ -0.52
CLCNKA-202ENST00000375692 CCKARP32238 428 aa11.79□□□□□ -0.52
CLCNKA-202ENST00000375692 EDDM3BP56851 147 aa11.79□□□□□ -0.52
CLCNKA-202ENST00000375692 CXorf67Q86X51 503 aaPredicted RBP11.79□□□□□ -0.52
CLCNKA-202ENST00000375692 OR2J1Q9GZK6 312 aa11.79□□□□□ -0.52
CLCNKA-202ENST00000375692 APC2O95996 2303 aa11.79□□□□□ -0.52
CLCNKA-202ENST00000375692 WNT9BO14905 357 aa11.79□□□□□ -0.52
CLCNKA-202ENST00000375692 GFRA3O60609 400 aa11.79□□□□□ -0.52
CLCNKA-202ENST00000375692 RAC2P15153 192 aa11.79□□□□□ -0.52
CLCNKA-202ENST00000375692 MCEMP1Q8IX19 187 aa11.79□□□□□ -0.52
CLCNKA-202ENST00000375692 Q8N7P7 452 aa11.79□□□□□ -0.52
CLCNKA-202ENST00000375692 GALMQ96C23 342 aa11.79□□□□□ -0.52
CLCNKA-202ENST00000375692 FAM173AQ9BQD7 235 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms