RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 MFSD4AQ8N468 514 aa9.58□□□□□ -0.88
LSM2-208ENST00000375661 S1PR3Q99500 378 aa9.58□□□□□ -0.88
LSM2-208ENST00000375661 THAP7Q9BT49 309 aaPredicted RBP9.58□□□□□ -0.88
LSM2-208ENST00000375661 ZNF107Q9UII5 783 aaPredicted RBP9.58□□□□□ -0.88
LSM2-208ENST00000375661 ZNF221Q9UK13 617 aa9.58□□□□□ -0.88
LSM2-208ENST00000375661 SNRNP70P08621 437 aaKnown RBP9.57□□□□□ -0.88
LSM2-208ENST00000375661 LINC00205P59089 165 aa9.57□□□□□ -0.88
LSM2-208ENST00000375661 TAS2R19P59542 299 aa9.57□□□□□ -0.88
LSM2-208ENST00000375661 RPL23AP62750 156 aaKnown RBP9.57□□□□□ -0.88
LSM2-208ENST00000375661 EBI3Q14213 229 aa9.57□□□□□ -0.88
LSM2-208ENST00000375661 ACTBL2Q562R1 376 aa9.57□□□□□ -0.88
LSM2-208ENST00000375661 C10orf99Q6UWK7 81 aa9.57□□□□□ -0.88
LSM2-208ENST00000375661 GLDNQ6ZMI3 551 aaPredicted RBP9.57□□□□□ -0.88
LSM2-208ENST00000375661 LINC00299Q6ZSB3 139 aa9.57□□□□□ -0.88
LSM2-208ENST00000375661 Q8N402 240 aa9.57□□□□□ -0.88
LSM2-208ENST00000375661 COMMD1Q8N668 190 aa9.57□□□□□ -0.88
LSM2-208ENST00000375661 ZNF383Q8NA42 475 aa9.57□□□□□ -0.88
LSM2-208ENST00000375661 DRAXINQ8NBI3 349 aaPredicted RBP9.57□□□□□ -0.88
LSM2-208ENST00000375661 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.57□□□□□ -0.88
LSM2-208ENST00000375661 OR4D10Q8NGI6 311 aa9.57□□□□□ -0.88
LSM2-208ENST00000375661 CHPT1Q8WUD6 406 aa9.57□□□□□ -0.88
LSM2-208ENST00000375661 TRIM63Q969Q1 353 aa9.57□□□□□ -0.88
LSM2-208ENST00000375661 SDHCQ99643 169 aaPredicted RBP9.57□□□□□ -0.88
LSM2-208ENST00000375661 ZNF2Q9BSG1 426 aaPredicted RBP9.57□□□□□ -0.88
LSM2-208ENST00000375661 AKIP1Q9NQ31 210 aa9.57□□□□□ -0.88
LSM2-208ENST00000375661 RBM7Q9Y580 266 aaKnown RBP9.57□□□□□ -0.88
LSM2-208ENST00000375661 ANKRD20A5PA0PJZ0 165 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 M0R1X1 148 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 IGKV1D-33P01593 117 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 IGKV1-33P01594 117 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 ZNF735P0CB33 412 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 TBPP20226 339 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 CD1BP29016 333 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 FXYD4P59646 89 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 LSAMPQ13449 338 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 BAK1Q16611 211 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 RNASE10Q5GAN6 216 aaKnown RBP9.56□□□□□ -0.88
LSM2-208ENST00000375661 STEAP1BQ6NZ63 245 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 Q8N6K4 173 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 ZNF645Q8N7E2 425 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 OR5AN1Q8NGI8 311 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 OR6F1Q8NGZ6 308 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 MOB3AQ96BX8 217 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 EAF1Q96JC9 268 aaPredicted RBP9.56□□□□□ -0.88
LSM2-208ENST00000375661 P2RX4Q99571 388 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 CCL28Q9NRJ3 127 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 MOB4Q9Y3A3 225 aa9.56□□□□□ -0.88
LSM2-208ENST00000375661 OR5H14A6NHG9 310 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 H0YJW9 148 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 RAB3DO95716 219 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 FAM106CPP0CH98 169 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 DUTP33316 252 aaKnown RBP9.55□□□□□ -0.88
LSM2-208ENST00000375661 TSPAN5P62079 268 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 ZNF45Q02386 682 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 EIF4EBP1Q13541 118 aaPredicted RBP9.55□□□□□ -0.88
LSM2-208ENST00000375661 KLF9Q13886 244 aaPredicted RBP9.55□□□□□ -0.88
LSM2-208ENST00000375661 HNF4GQ14541 408 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 C9orf152Q5JTZ5 239 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 AADACL3Q5VUY0 350 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 FAAP20Q6NZ36 180 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 LHFPL1Q86WI0 220 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 GDPD1Q8N9F7 314 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 OR4C16Q8NGL9 310 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 SECTM1Q8WVN6 248 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 RITA1Q96K30 269 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 SLC5A7Q9GZV3 580 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 FXYD6Q9H0Q3 95 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 TAS2R8Q9NYW2 309 aa9.55□□□□□ -0.88
LSM2-208ENST00000375661 LSM4Q9Y4Z0 139 aaKnown RBP9.55□□□□□ -0.88
LSM2-208ENST00000375661 LINC00473A8K010 186 aa9.54□□□□□ -0.88
LSM2-208ENST00000375661 NUDT19A8MXV4 375 aa9.54□□□□□ -0.88
LSM2-208ENST00000375661 SLC22A5O76082 557 aa9.54□□□□□ -0.88
LSM2-208ENST00000375661 IFNA6P05013 189 aa9.54□□□□□ -0.88
LSM2-208ENST00000375661 AKAIN1P0CW23 69 aa9.54□□□□□ -0.88
LSM2-208ENST00000375661 GNRHRP30968 328 aa9.54□□□□□ -0.88
LSM2-208ENST00000375661 HERV-K104P61576 105 aa9.54□□□□□ -0.88
LSM2-208ENST00000375661 RPL30P62888 115 aaKnown RBP9.54□□□□□ -0.88
LSM2-208ENST00000375661 SLC35B1P78383 322 aa9.54□□□□□ -0.88
LSM2-208ENST00000375661 HES1Q14469 280 aa9.54□□□□□ -0.88
LSM2-208ENST00000375661 MSMO1Q15800 293 aa9.54□□□□□ -0.88
LSM2-208ENST00000375661 ZNF818PQ6ZRF7 136 aa9.54□□□□□ -0.88
LSM2-208ENST00000375661 C8orf86Q6ZUL3 223 aa9.54□□□□□ -0.88
LSM2-208ENST00000375661 TMEM17Q86X19 198 aa9.54□□□□□ -0.88
LSM2-208ENST00000375661 ARRDC1Q8N5I2 433 aa9.54□□□□□ -0.88
LSM2-208ENST00000375661 DDB2Q92466 427 aa9.54□□□□□ -0.88
LSM2-208ENST00000375661 SH2D7A6NKC9 451 aaPredicted RBP9.53□□□□□ -0.88
LSM2-208ENST00000375661 FGF16O43320 207 aa9.53□□□□□ -0.88
LSM2-208ENST00000375661 MOSP00540 346 aa9.53□□□□□ -0.88
LSM2-208ENST00000375661 TMEM11P17152 192 aa9.53□□□□□ -0.88
LSM2-208ENST00000375661 MEF2DQ14814 521 aa9.53□□□□□ -0.88
LSM2-208ENST00000375661 ZNF329Q86UD4 541 aa9.53□□□□□ -0.88
LSM2-208ENST00000375661 ZBTB34Q8NCN2 500 aa9.53□□□□□ -0.88
LSM2-208ENST00000375661 KLHL30-AS1Q8NEE0 82 aa9.53□□□□□ -0.88
LSM2-208ENST00000375661 OR2T10Q8NGZ9 312 aa9.53□□□□□ -0.88
LSM2-208ENST00000375661 MRGPRFQ96AM1 343 aa9.53□□□□□ -0.88
LSM2-208ENST00000375661 GPHA2Q96T91 129 aa9.53□□□□□ -0.88
LSM2-208ENST00000375661 PLSCR3Q9NRY6 295 aa9.53□□□□□ -0.88
LSM2-208ENST00000375661 DISC1C4P0D8 188 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 CNTFRP26992 372 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 MC5RP33032 325 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms