RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 C11orf94C9JXX5 98 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 CCL1P22362 96 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 TBR1Q16650 682 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 POC1AQ8NBT0 407 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 OR4C12Q96R67 309 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 SOSTQ9BQB4 213 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 TLNRD1Q9H1K6 362 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 PLAUP00749 431 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 CTRB1P17538 263 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 BTCP35070 178 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 RPL8P62917 257 aaKnown RBP15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 PAX5Q02548 391 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 CTRB2Q6GPI1 263 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 STARD4Q96DR4 205 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 A0A0A6YYD4 124 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 OR2A4O95047 310 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 MMP7P09237 267 aaPredicted RBP15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 FBP1P09467 338 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 HKR1P10072 659 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 MUC1P15941 1255 aaPredicted RBP15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 CBLN2Q8IUK8 224 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 OR8I2Q8N0Y5 310 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 PNKDQ8N490 385 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 OR2A7Q96R45 310 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 ZDHHC11Q9H8X9 412 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 JPT1Q9UK76 154 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 C17orf100A8MU93 164 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 GOSR1O95249 250 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 MSGN1A6NI15 193 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 DBX1A6NMT0 343 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 CCDC144NLQ6NUI1 221 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 SLC35E3Q7Z769 313 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 METTL1Q9UBP6 276 aaKnown RBP15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 HTR1DP28221 377 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 SPCS3P61009 180 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 SCGB2A2Q13296 93 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 TUSC1Q2TAM9 212 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 PLA2G2CQ5R387 149 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 ZNF561Q8N587 486 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 CLEC5AQ9NY25 188 aa15.18■□□□□ 0.02
PTPDC1-202ENST00000375360 F8VVB4 439 aa15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 F8VWA3 439 aa15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 CLDN34H7C241 214 aa15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 TECRQ9NZ01 308 aaKnown RBP15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 REG1AP05451 166 aa15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 MC5RP33032 325 aa15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 CDKN1AP38936 164 aa15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 GNG4P50150 75 aa15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 FAM216AQ8WUB2 273 aa15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 RTBDNQ9BSG5 229 aaPredicted RBP15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 KIF26AQ9ULI4 1882 aaPredicted RBP15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 LRRK1Q38SD2 2015 aa15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 PTBP3O95758 552 aaKnown RBP15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 PGA5P0DJD9 388 aa15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 OR10J1P30954 320 aa15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 UCP3P55916 312 aa15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 FAM222BQ8WU58 562 aa15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 NPVFQ9HCQ7 196 aa15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 FREM1Q5H8C1 2179 aa15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 PLXNA2O75051 1894 aa15.17■□□□□ 0.02
PTPDC1-202ENST00000375360 IFNL4K9M1U5 179 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 CCL3L1P16619 93 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 FHITP49789 147 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 AWAT1Q58HT5 328 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 OR9G1Q8NH87 305 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 AP1S3Q96PC3 154 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 CLCF1Q9UBD9 225 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 CCDC168Q8NDH2 2452 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 TNFRSF9Q07011 255 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 MYPOPQ86VE0 399 aaPredicted RBP15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 CLRN3Q8NCR9 226 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 PNRC2Q9NPJ4 139 aaKnown RBP15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 WASHC3Q9Y3C0 194 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 IGKV1-27A0A075B6S5 117 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 IGKV1D-13A0A0B4J2D9 117 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 ZNF729A6NN14 1252 aaPredicted RBP15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 LILRA1O75019 489 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 FAM157CP0CG43 387 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 IGKV1-13P0DP09 117 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 C5orf24Q7Z6I8 188 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 RTN4RL2Q86UN3 420 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 PARP11Q9NR21 331 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 WDR82Q6UXN9 313 aa15.16■□□□□ 0.02
PTPDC1-202ENST00000375360 LOC105371242A0A075B767 164 aa15.15■□□□□ 0.02
PTPDC1-202ENST00000375360 SSX7Q7RTT5 188 aa15.15■□□□□ 0.02
PTPDC1-202ENST00000375360 PROK2Q9HC23 129 aa15.15■□□□□ 0.02
PTPDC1-202ENST00000375360 SELLP14151 372 aa15.15■□□□□ 0.02
PTPDC1-202ENST00000375360 TCL1AP56279 114 aa15.15■□□□□ 0.02
PTPDC1-202ENST00000375360 BSXQ3C1V8 233 aa15.15■□□□□ 0.02
PTPDC1-202ENST00000375360 MRPL30Q8TCC3 161 aaKnown RBP15.15■□□□□ 0.02
PTPDC1-202ENST00000375360 C17orf98A8MV24 154 aa15.15■□□□□ 0.02
PTPDC1-202ENST00000375360 PITX3O75364 302 aa15.15■□□□□ 0.02
PTPDC1-202ENST00000375360 S100A4P26447 101 aaKnown RBP15.15■□□□□ 0.02
PTPDC1-202ENST00000375360 FAM209AQ5JX71 171 aa15.15■□□□□ 0.02
PTPDC1-202ENST00000375360 NIT2Q9NQR4 276 aa15.15■□□□□ 0.02
PTPDC1-202ENST00000375360 TCF19Q9Y242 345 aa15.15■□□□□ 0.02
PTPDC1-202ENST00000375360 C2orf16Q68DN1 1984 aa15.15■□□□□ 0.02
PTPDC1-202ENST00000375360 TRAV24A0A0B4J272 114 aa15.15■□□□□ 0.02
PTPDC1-202ENST00000375360 HSPE1P61604 102 aaKnown RBP15.15■□□□□ 0.02
PTPDC1-202ENST00000375360 PDPNQ86YL7 162 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms