RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 COMPP49747 757 aaPredicted RBP9.04□□□□□ -0.96
HSPG2-202ENST00000374676 BRWD1-AS2P59051 145 aa9.04□□□□□ -0.96
HSPG2-202ENST00000374676 RPS16P62249 146 aaKnown RBP9.04□□□□□ -0.96
HSPG2-202ENST00000374676 CATR1Q13166 79 aa9.04□□□□□ -0.96
HSPG2-202ENST00000374676 CBX3Q13185 183 aa9.04□□□□□ -0.96
HSPG2-202ENST00000374676 ZNF846Q147U1 533 aa9.04□□□□□ -0.96
HSPG2-202ENST00000374676 SURF2Q15527 256 aaPredicted RBP9.04□□□□□ -0.96
HSPG2-202ENST00000374676 SCGB2B2Q4G0G5 96 aa9.04□□□□□ -0.96
HSPG2-202ENST00000374676 ZNF57Q68EA5 555 aaPredicted RBP9.04□□□□□ -0.96
HSPG2-202ENST00000374676 FAAP20Q6NZ36 180 aa9.04□□□□□ -0.96
HSPG2-202ENST00000374676 KCTD9Q7L273 389 aa9.04□□□□□ -0.96
HSPG2-202ENST00000374676 FAM71E2Q8N5Q1 922 aa9.04□□□□□ -0.96
HSPG2-202ENST00000374676 TCTEX1D1Q8N7M0 179 aa9.04□□□□□ -0.96
HSPG2-202ENST00000374676 C5orf56Q8N8D9 126 aa9.04□□□□□ -0.96
HSPG2-202ENST00000374676 Q8N9W7 124 aa9.04□□□□□ -0.96
HSPG2-202ENST00000374676 OR51S1Q8NGJ8 323 aa9.04□□□□□ -0.96
HSPG2-202ENST00000374676 ZFAND1Q8TCF1 268 aa9.04□□□□□ -0.96
HSPG2-202ENST00000374676 TCTEX1D2Q8WW35 142 aa9.04□□□□□ -0.96
HSPG2-202ENST00000374676 MRGPRFQ96AM1 343 aa9.04□□□□□ -0.96
HSPG2-202ENST00000374676 TSNAXQ99598 290 aaKnown RBP9.04□□□□□ -0.96
HSPG2-202ENST00000374676 CCDC32Q9BV29 185 aa9.04□□□□□ -0.96
HSPG2-202ENST00000374676 WDR12Q9GZL7 423 aaKnown RBP9.04□□□□□ -0.96
HSPG2-202ENST00000374676 CLPSL1A2RUU4 121 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 NAP1L6A6NFF2 107 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 TNFSF12O43508 249 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 FCGR3BO75015 233 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 SPDEFO95238 335 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 CTSDP07339 412 aaPredicted RBP9.03□□□□□ -0.96
HSPG2-202ENST00000374676 S100GP29377 79 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 INPP1P49441 399 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 RND3P61587 244 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 MMDQ15546 238 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 IDO2Q6ZQW0 420 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 OR13C8Q8NGS7 320 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 LINC01006Q8NI28 216 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 OSR1Q8TAX0 266 aaPredicted RBP9.03□□□□□ -0.96
HSPG2-202ENST00000374676 MARCH1Q8TCQ1 289 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 RBMXL1Q96E39 390 aaKnown RBP9.03□□□□□ -0.96
HSPG2-202ENST00000374676 SCGB3A2Q96PL1 93 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 GPHA2Q96T91 129 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 RASL11BQ9BPW5 248 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 C7orf50Q9BRJ6 194 aaKnown RBP9.03□□□□□ -0.96
HSPG2-202ENST00000374676 ZNF702PQ9H963 129 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 BEX1Q9HBH7 125 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 FAM212BQ9NTI7 297 aaPredicted RBP9.03□□□□□ -0.96
HSPG2-202ENST00000374676 LIN7CQ9NUP9 197 aaKnown RBP9.03□□□□□ -0.96
HSPG2-202ENST00000374676 MCUBQ9NWR8 336 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 KIAA1456Q9P272 454 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 GPR132Q9UNW8 380 aa9.03□□□□□ -0.96
HSPG2-202ENST00000374676 RRHO14718 337 aa9.02□□□□□ -0.97
HSPG2-202ENST00000374676 PGAM2P15259 253 aa9.02□□□□□ -0.97
HSPG2-202ENST00000374676 F2RP25116 425 aa9.02□□□□□ -0.97
HSPG2-202ENST00000374676 CNTFRP26992 372 aa9.02□□□□□ -0.97
HSPG2-202ENST00000374676 PSG5Q15238 335 aa9.02□□□□□ -0.97
HSPG2-202ENST00000374676 C5orf64Q2M2E5 130 aa9.02□□□□□ -0.97
HSPG2-202ENST00000374676 ABCA11PQ4W5N1 156 aa9.02□□□□□ -0.97
HSPG2-202ENST00000374676 PHLDA2Q53GA4 152 aa9.02□□□□□ -0.97
HSPG2-202ENST00000374676 Q6ZS46 218 aa9.02□□□□□ -0.97
HSPG2-202ENST00000374676 SPAG16Q8N0X2 631 aa9.02□□□□□ -0.97
HSPG2-202ENST00000374676 POC5Q8NA72 575 aa9.02□□□□□ -0.97
HSPG2-202ENST00000374676 OR4S2Q8NH73 311 aa9.02□□□□□ -0.97
HSPG2-202ENST00000374676 OR2T6Q8NHC8 308 aa9.02□□□□□ -0.97
HSPG2-202ENST00000374676 CD300LFQ8TDQ1 290 aa9.02□□□□□ -0.97
HSPG2-202ENST00000374676 TAF15Q92804 592 aaKnown RBP eCLIP9.02□□□□□ -0.97
HSPG2-202ENST00000374676 MDFIQ99750 246 aa9.02□□□□□ -0.97
HSPG2-202ENST00000374676 SLC2A9Q9NRM0 540 aa9.02□□□□□ -0.97
HSPG2-202ENST00000374676 SRRM4A7MD48 611 aaKnown RBP9.01□□□□□ -0.97
HSPG2-202ENST00000374676 CENPXA8MT69 81 aa9.01□□□□□ -0.97
HSPG2-202ENST00000374676 SHOXO15266 292 aa9.01□□□□□ -0.97
HSPG2-202ENST00000374676 MPPED1O15442 326 aa9.01□□□□□ -0.97
HSPG2-202ENST00000374676 CRYZL1O95825 349 aa9.01□□□□□ -0.97
HSPG2-202ENST00000374676 HPRT1P00492 218 aa9.01□□□□□ -0.97
HSPG2-202ENST00000374676 IGLV2-23P01705 113 aa9.01□□□□□ -0.97
HSPG2-202ENST00000374676 IGHG2P01859 326 aa9.01□□□□□ -0.97
HSPG2-202ENST00000374676 HLA-DRB1P01911 266 aa9.01□□□□□ -0.97
HSPG2-202ENST00000374676 RLN1P04808 185 aa9.01□□□□□ -0.97
HSPG2-202ENST00000374676 CRYGBP07316 175 aa9.01□□□□□ -0.97
HSPG2-202ENST00000374676 TBC1D26Q86UD7 250 aa9.01□□□□□ -0.97
HSPG2-202ENST00000374676 CCDC71LQ8N9Z2 235 aa9.01□□□□□ -0.97
HSPG2-202ENST00000374676 OR51H1Q8NH63 302 aa9.01□□□□□ -0.97
HSPG2-202ENST00000374676 HARBI1Q96MB7 349 aa9.01□□□□□ -0.97
HSPG2-202ENST00000374676 SLC25A21Q9BQT8 299 aaPredicted RBP9.01□□□□□ -0.97
HSPG2-202ENST00000374676 AIFM2Q9BRQ8 373 aa9.01□□□□□ -0.97
HSPG2-202ENST00000374676 RTBDNQ9BSG5 229 aaPredicted RBP9.01□□□□□ -0.97
HSPG2-202ENST00000374676 C5orf66Q9H5L9 145 aa9.01□□□□□ -0.97
HSPG2-202ENST00000374676 COPZ2Q9P299 210 aa9.01□□□□□ -0.97
HSPG2-202ENST00000374676 SH2D7A6NKC9 451 aaPredicted RBP9□□□□□ -0.97
HSPG2-202ENST00000374676 PLA2G10O15496 165 aa9□□□□□ -0.97
HSPG2-202ENST00000374676 SLC25A17O43808 307 aa9□□□□□ -0.97
HSPG2-202ENST00000374676 RAMP3O60896 148 aa9□□□□□ -0.97
HSPG2-202ENST00000374676 PEX14O75381 377 aa9□□□□□ -0.97
HSPG2-202ENST00000374676 HRASP01112 189 aa9□□□□□ -0.97
HSPG2-202ENST00000374676 VSIG10L2P0DP72 767 aa9□□□□□ -0.97
HSPG2-202ENST00000374676 PI3P19957 117 aa9□□□□□ -0.97
HSPG2-202ENST00000374676 MDKP21741 143 aaPredicted RBP9□□□□□ -0.97
HSPG2-202ENST00000374676 PIGPP57054 158 aa9□□□□□ -0.97
HSPG2-202ENST00000374676 PROK1P58294 105 aa9□□□□□ -0.97
HSPG2-202ENST00000374676 TAS2R31P59538 309 aa9□□□□□ -0.97
HSPG2-202ENST00000374676 UBE2KP61086 200 aa9□□□□□ -0.97
HSPG2-202ENST00000374676 POU2AF1Q16633 256 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms