RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 RBMXL3Q8N7X1 1067 aaKnown RBP11.63□□□□□ -0.55
HMGCL-203ENST00000374490 OR13A1Q8NGR1 328 aa11.63□□□□□ -0.55
HMGCL-203ENST00000374490 ACTR3CQ9C0K3 210 aaPredicted RBP11.63□□□□□ -0.55
HMGCL-203ENST00000374490 TMPRSS5Q9H3S3 457 aa11.63□□□□□ -0.55
HMGCL-203ENST00000374490 NCOR1P1Q9H4R4 102 aa11.63□□□□□ -0.55
HMGCL-203ENST00000374490 MANBALQ9NQG1 85 aa11.63□□□□□ -0.55
HMGCL-203ENST00000374490 UFSP2Q9NUQ7 469 aa11.63□□□□□ -0.55
HMGCL-203ENST00000374490 MBD3L4A6NDZ8 208 aaPredicted RBP11.62□□□□□ -0.55
HMGCL-203ENST00000374490 MBD3L3A6NE82 208 aaPredicted RBP11.62□□□□□ -0.55
HMGCL-203ENST00000374490 MBD3L5A6NJ08 208 aaPredicted RBP11.62□□□□□ -0.55
HMGCL-203ENST00000374490 PMS2P5A8MQ11 134 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 CEBPZOSA8MTT3 80 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 CLDN34H7C241 214 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 MGST3O14880 152 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 ZNF737O75373 536 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 CGAP01215 116 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 PRDX2P32119 198 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 KIR2DS2P43631 304 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 PSMB3P49720 205 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 FABP6P51161 128 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 Q3ZCU0 254 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 AARDQ4LEZ3 155 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 C1orf87Q8N0U7 546 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 ZNF709Q8N972 641 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 ZNF610Q8N9Z0 462 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 MBD3L2Q8NHZ7 208 aaPredicted RBP11.62□□□□□ -0.55
HMGCL-203ENST00000374490 Q8WTZ3 238 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 SNX22Q96L94 193 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 SDF2L1Q9HCN8 221 aa11.62□□□□□ -0.55
HMGCL-203ENST00000374490 ZNF727A8MUV8 499 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 SRRM5B3KS81 715 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 TMEM250H0YL14 139 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 RBFOX2O43251 390 aaKnown RBP eCLIP11.61□□□□□ -0.55
HMGCL-203ENST00000374490 YPEL1O60688 119 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 TNFSF13O75888 250 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 NQO2P16083 231 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 FGF7P21781 194 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 GPR12P47775 334 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 ZNF674Q2M3X9 581 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 CR1LQ2VPA4 569 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 OR2B11Q5JQS5 317 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 FAM180AQ6UWF9 173 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 CD177Q8N6Q3 437 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 STARD4Q96DR4 205 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 ABHD17AQ96GS6 310 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 YPEL2Q96QA6 119 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 MSL2Q9HCI7 577 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 CLN8Q9UBY8 286 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 NAT8Q9UHE5 227 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 PSG11Q9UQ72 335 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 SLC25A15Q9Y619 301 aa11.61□□□□□ -0.55
HMGCL-203ENST00000374490 K7EM74 188 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 ITGB1BP1O14713 200 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 HPRT1P00492 218 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 OPN1MWP04001 364 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 OPN1MW2P0DN77 364 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 OPN1MW3P0DN78 364 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 HOXA5P20719 270 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 FGF8P55075 233 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-203ENST00000374490 BRWD1-AS2P59051 145 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 CTAG1AP78358 180 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 SSX7Q7RTT5 188 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 MED12LQ86YW9 2145 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 R3HDM4Q96D70 268 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 MARCH11A6NNE9 402 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 ST8SIA5O15466 376 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 ZG16O60844 167 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 RBMXL2O75526 392 aaKnown RBP11.6□□□□□ -0.55
HMGCL-203ENST00000374490 SSTR5P35346 364 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 ERVK-16P61578 105 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 MEF2BQ02080 365 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-203ENST00000374490 FOXF2Q12947 444 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 ACOT6Q3I5F7 207 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-203ENST00000374490 FFAR4Q5NUL3 377 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 ACSM6Q6P461 480 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 BTNL3Q6UXE8 466 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 CYP2G1PQ6ZSU1 146 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 RPP25LQ8N5L8 163 aaKnown RBP11.6□□□□□ -0.55
HMGCL-203ENST00000374490 OR2Z1Q8NG97 314 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 OR10G9Q8NGN4 311 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 OR10G7Q8NGN6 311 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 OR52E5Q8NH55 327 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 OPN3Q9H1Y3 402 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-203ENST00000374490 METRNQ9UJH8 293 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 FZR1Q9UM11 496 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 GAB2Q9UQC2 676 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 TP53TG5Q9Y2B4 290 aa11.6□□□□□ -0.55
HMGCL-203ENST00000374490 CYB5BO43169 146 aa11.59□□□□□ -0.55
HMGCL-203ENST00000374490 MPDU1O75352 247 aa11.59□□□□□ -0.55
HMGCL-203ENST00000374490 WISP2O76076 250 aa11.59□□□□□ -0.55
HMGCL-203ENST00000374490 KBTBD11O94819 623 aa11.59□□□□□ -0.55
HMGCL-203ENST00000374490 CXCL1P09341 107 aa11.59□□□□□ -0.55
HMGCL-203ENST00000374490 MDKP21741 143 aaPredicted RBP11.59□□□□□ -0.55
HMGCL-203ENST00000374490 DUTP33316 252 aaKnown RBP11.59□□□□□ -0.55
HMGCL-203ENST00000374490 ERVFRD-1P60508 538 aa11.59□□□□□ -0.55
HMGCL-203ENST00000374490 SPCS3P61009 180 aa11.59□□□□□ -0.55
HMGCL-203ENST00000374490 B2MP61769 119 aa11.59□□□□□ -0.55
HMGCL-203ENST00000374490 KLRB1Q12918 225 aa11.59□□□□□ -0.55
HMGCL-203ENST00000374490 TIMM23BQ5SRD1 257 aa11.59□□□□□ -0.55
HMGCL-203ENST00000374490 WDR25Q64LD2 544 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms