RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 EDDM3BP56851 147 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 LINC00205P59089 165 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 VAMP2P63027 116 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 SRSF3P84103 164 aaKnown RBP10.29□□□□□ -0.76
PRPF4-202ENST00000374199 LRRC75BQ2VPJ9 315 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 OR4C12Q96R67 309 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 SMIM3Q9BZL3 60 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 TMEM14BQ9NUH8 114 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 GNG12Q9UBI6 72 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 FOXA2Q9Y261 457 aaPredicted RBP10.29□□□□□ -0.76
PRPF4-202ENST00000374199 RBM7Q9Y580 266 aaKnown RBP10.29□□□□□ -0.76
PRPF4-202ENST00000374199 TIMM9Q9Y5J7 89 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 TRBV23-1A0A0A0MS06 115 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 FBXO24O75426 580 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 OR9G9P0C7N8 305 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 LYPD2Q6UXB3 125 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 CISD1Q9NZ45 108 aaKnown RBP10.29□□□□□ -0.76
PRPF4-202ENST00000374199 AKR1C2P52895 323 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 DHRS7BQ6IAN0 325 aaPredicted RBP10.29□□□□□ -0.76
PRPF4-202ENST00000374199 Q8N7P7 452 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 R3HDM4Q96D70 268 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 PSENENQ9NZ42 101 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 DCHS2Q6V1P9 2916 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 TET2Q6N021 2002 aaPredicted RBP10.29□□□□□ -0.76
PRPF4-202ENST00000374199 INS-IGF2F8WCM5 200 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 GPR37O15354 613 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 CT45A6P0DMU7 189 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 CT45A5P0DMU8 189 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 CT45A7P0DMV0 189 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 TAGLNQ01995 201 aaKnown RBP10.28□□□□□ -0.76
PRPF4-202ENST00000374199 C4orf17Q53FE4 359 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 SPSB3Q6PJ21 355 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 STX12Q86Y82 276 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 LY6G5BQ8NDX9 201 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 LRRC46Q96FV0 321 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 FAM90A27PA6NNH2 459 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 TMPRSS2O15393 492 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 NDUFS6O75380 124 aaKnown RBP10.28□□□□□ -0.76
PRPF4-202ENST00000374199 ZNF816Q0VGE8 651 aaPredicted RBP10.28□□□□□ -0.76
PRPF4-202ENST00000374199 MUC15Q8N387 334 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 OR5AN1Q8NGI8 311 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 ZNF714Q96N38 554 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 CIB3Q96Q77 187 aaPredicted RBP10.28□□□□□ -0.76
PRPF4-202ENST00000374199 SEC11CQ9BY50 192 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 SMDT1Q9H4I9 107 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 Q6ZRG5 221 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 OR4S2Q8NH73 311 aa10.28□□□□□ -0.76
PRPF4-202ENST00000374199 IGF2RP11717 2491 aa10.27□□□□□ -0.76
PRPF4-202ENST00000374199 NQO2P16083 231 aa10.27□□□□□ -0.77
PRPF4-202ENST00000374199 OMGP23515 440 aa10.27□□□□□ -0.77
PRPF4-202ENST00000374199 ATP6V1FQ16864 119 aa10.27□□□□□ -0.77
PRPF4-202ENST00000374199 BSXQ3C1V8 233 aa10.27□□□□□ -0.77
PRPF4-202ENST00000374199 IGFBPL1Q8WX77 278 aa10.27□□□□□ -0.77
PRPF4-202ENST00000374199 USF3Q68DE3 2245 aa10.27□□□□□ -0.77
PRPF4-202ENST00000374199 C15orf61A6NNL5 157 aa10.27□□□□□ -0.77
PRPF4-202ENST00000374199 CST7O76096 145 aa10.27□□□□□ -0.77
PRPF4-202ENST00000374199 KRASP01116 189 aa10.27□□□□□ -0.77
PRPF4-202ENST00000374199 SPCS3P61009 180 aa10.27□□□□□ -0.77
PRPF4-202ENST00000374199 PRAMEF5Q5TYX0 476 aa10.27□□□□□ -0.77
PRPF4-202ENST00000374199 ITLN2Q8WWU7 325 aaPredicted RBP10.27□□□□□ -0.77
PRPF4-202ENST00000374199 PCGF1Q9BSM1 259 aa10.27□□□□□ -0.77
PRPF4-202ENST00000374199 WDR61Q9GZS3 305 aaKnown RBP10.27□□□□□ -0.77
PRPF4-202ENST00000374199 ZC4H2Q9NQZ6 224 aa10.27□□□□□ -0.77
PRPF4-202ENST00000374199 UQCC1Q9NVA1 299 aa10.27□□□□□ -0.77
PRPF4-202ENST00000374199 C15orf62A8K5M9 175 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 M0R1X1 148 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 DVL1O14640 695 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 DVL1P1P54792 670 aaPredicted RBP10.26□□□□□ -0.77
PRPF4-202ENST00000374199 RPL31P62899 125 aaKnown RBP10.26□□□□□ -0.77
PRPF4-202ENST00000374199 H2BFWTQ7Z2G1 175 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 TNFRSF14Q92956 283 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 ZNF257Q9Y2Q1 563 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 TMEM170AQ8WVE7 144 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 QTRT1Q9BXR0 403 aaKnown RBP10.26□□□□□ -0.77
PRPF4-202ENST00000374199 CBLN4Q9NTU7 201 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 PRELID3BQ9Y3B1 194 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 BTBD17A6NE02 478 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 WRBO00258 174 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 ATF4P18848 351 aaPredicted RBP10.26□□□□□ -0.77
PRPF4-202ENST00000374199 HBG1P69891 147 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 HBG2P69892 147 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 SERF2P84101 59 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 LRRC10Q5BKY1 277 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 DEFB108BQ8NET1 73 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 DTD1Q8TEA8 209 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 S1PR3Q99500 378 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 GGACTQ9BVM4 153 aa10.26□□□□□ -0.77
PRPF4-202ENST00000374199 C9JQL5 133 aa10.25□□□□□ -0.77
PRPF4-202ENST00000374199 TMEM267Q0VDI3 215 aaPredicted RBP10.25□□□□□ -0.77
PRPF4-202ENST00000374199 LY6DQ14210 128 aa10.25□□□□□ -0.77
PRPF4-202ENST00000374199 TMEM177Q53S58 311 aa10.25□□□□□ -0.77
PRPF4-202ENST00000374199 THNSL2Q86YJ6 484 aa10.25□□□□□ -0.77
PRPF4-202ENST00000374199 IQCF2Q8IXL9 164 aa10.25□□□□□ -0.77
PRPF4-202ENST00000374199 LFNGQ8NES3 379 aa10.25□□□□□ -0.77
PRPF4-202ENST00000374199 CA5BP1Q8WTZ4 195 aa10.25□□□□□ -0.77
PRPF4-202ENST00000374199 MBD3L1Q8WWY6 194 aa10.25□□□□□ -0.77
PRPF4-202ENST00000374199 TSPAN4O14817 238 aa10.25□□□□□ -0.77
PRPF4-202ENST00000374199 NDUFB3O43676 98 aa10.25□□□□□ -0.77
PRPF4-202ENST00000374199 FCGR3BO75015 233 aa10.25□□□□□ -0.77
PRPF4-202ENST00000374199 CLINT1Q14677 625 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms