RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 RBKSQ9H477 322 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 MANBALQ9NQG1 85 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 SIRT7Q9NRC8 400 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 FOXA2Q9Y261 457 aaPredicted RBP7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 DMDP11532 3685 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 GTF3C1Q12789 2109 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 INTS1Q8N201 2190 aaKnown RBP7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 A0A0G2JRQ6 117 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 SMCO3A2RU48 225 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 CEBPZOSA8MTT3 80 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 C17orf98A8MV24 154 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 TMEM250H0YL14 139 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 K7EM74 188 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 M0R1X1 148 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 DNASE2O00115 360 aaPredicted RBP7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 RBMXL2O75526 392 aaKnown RBP7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 APOA2P02652 100 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 EGR1P18146 543 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 AGAP20933 346 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 EPHA1P21709 976 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 MDKP21741 143 aaPredicted RBP7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 CCKARP32238 428 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 CEBPDP49716 269 aaPredicted RBP7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 PSMB3P49720 205 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 PPOXP50336 477 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 RAB13P51153 203 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 ZNF137PP52743 207 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 HSPE1P61604 102 aaKnown RBP7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 RPL30P62888 115 aaKnown RBP7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 EDDM3AQ14507 147 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 C17orf58Q2M2W7 97 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 ACOT6Q3I5F7 207 aaPredicted RBP7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 SPANXN5Q5MJ07 72 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 PRAMEF5Q5TYX0 476 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 NCR3LG1Q68D85 454 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 ADAM5Q6NVV9 412 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 FAM122CQ6P4D5 195 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 VHLLQ6RSH7 139 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 THNSL2Q86YJ6 484 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 WFDC8Q8IUA0 241 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 ZNF808Q8N4W9 903 aaPredicted RBP7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 ZNF439Q8NDP4 499 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 ZNF714Q96N38 554 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 RNF5Q99942 180 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 ACTR3CQ9C0K3 210 aaPredicted RBP7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 IFI27L2Q9H2X8 130 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 ENY2Q9NPA8 101 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 BET1LQ9NYM9 111 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 CISD1Q9NZ45 108 aaKnown RBP7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 SLC25A10Q9UBX3 287 aaPredicted RBP7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 FZR1Q9UM11 496 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 ARL2-SNX15V9GYD0 113 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 SPEGQ15772 3267 aa7.21□□□□□ -1.26
SNRNP40-202ENST00000373720 CTXND1A0A1B0GTU2 59 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 TMEM8BA6NDV4 472 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 C15orf61A6NNL5 157 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 TNFRSF13BO14836 293 aaPredicted RBP7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 RAMP3O60896 148 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 S1PR2O95136 353 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 IFNA17P01571 189 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 MT-ND4LP03901 98 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 ARG1P05089 322 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 THBDP07204 575 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 IL6RP08887 468 aaPredicted RBP7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 NFYBP25208 207 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 MAS1LP35410 378 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 G6PCP35575 357 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 LGALS7P47929 136 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 RPL31P62899 125 aaKnown RBP7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 MSMPQ1L6U9 139 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 HFEQ30201 348 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 ZNF833PQ6ZTB9 187 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 ODF3L1Q8IXM7 274 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 RPRMLQ8N4K4 120 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 TMEM217Q8N7C4 229 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 ZNRF1Q8ND25 227 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 SFT2D1Q8WV19 159 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 CACNG8Q8WXS5 425 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 NIPSNAP3BQ9BS92 247 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 SCRT1Q9BWW7 348 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 NPVFQ9HCQ7 196 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 DYNLRB1Q9NP97 96 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 TMEM14BQ9NUH8 114 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 SLC39A9Q9NUM3 307 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 TMEM106BQ9NUM4 274 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 VAX2Q9UIW0 290 aa7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 CNOT1A5YKK6 2376 aaKnown RBP7.2□□□□□ -1.26
SNRNP40-202ENST00000373720 A0A1W2PN81 502 aa7.19□□□□□ -1.26
SNRNP40-202ENST00000373720 LINC00473A8K010 186 aa7.19□□□□□ -1.26
SNRNP40-202ENST00000373720 TSPAN4O14817 238 aa7.19□□□□□ -1.26
SNRNP40-202ENST00000373720 TMPRSS2O15393 492 aa7.19□□□□□ -1.26
SNRNP40-202ENST00000373720 ZNHIT1O43257 154 aa7.19□□□□□ -1.26
SNRNP40-202ENST00000373720 FCGR3BO75015 233 aa7.19□□□□□ -1.26
SNRNP40-202ENST00000373720 MT-CO2P00403 227 aa7.19□□□□□ -1.26
SNRNP40-202ENST00000373720 METTL15P1P0C7V9 234 aa7.19□□□□□ -1.26
SNRNP40-202ENST00000373720 ADCYAP1P18509 176 aa7.19□□□□□ -1.26
SNRNP40-202ENST00000373720 CD1BP29016 333 aa7.19□□□□□ -1.26
SNRNP40-202ENST00000373720 CHRNA7P36544 502 aa7.19□□□□□ -1.26
SNRNP40-202ENST00000373720 OPRK1P41145 380 aa7.19□□□□□ -1.26
SNRNP40-202ENST00000373720 SUB1P53999 127 aaKnown RBP eCLIP7.19□□□□□ -1.263e-10■■■□□ 14.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms