RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 NCS1P62166 190 aa14.88□□□□□ -0.03
TRAPPC3-204ENST00000373166 RTL8BQ17RB0 113 aa14.88□□□□□ -0.03
TRAPPC3-204ENST00000373166 OVCH2Q7RTZ1 564 aa14.88□□□□□ -0.03
TRAPPC3-204ENST00000373166 SAMD12Q8N8I0 201 aa14.88□□□□□ -0.03
TRAPPC3-204ENST00000373166 SLC25A46Q96AG3 418 aa14.88□□□□□ -0.03
TRAPPC3-204ENST00000373166 S100A16Q96FQ6 103 aaKnown RBP14.88□□□□□ -0.03
TRAPPC3-204ENST00000373166 ADTRPQ96IZ2 230 aa14.88□□□□□ -0.03
TRAPPC3-204ENST00000373166 AUNIPQ9H7T9 357 aa14.88□□□□□ -0.03
TRAPPC3-204ENST00000373166 OR2W1Q9Y3N9 320 aa14.88□□□□□ -0.03
TRAPPC3-204ENST00000373166 WSB1Q9Y6I7 421 aa14.88□□□□□ -0.03
TRAPPC3-204ENST00000373166 RRASP10301 218 aa14.87□□□□□ -0.03
TRAPPC3-204ENST00000373166 NFYAP23511 347 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC3-204ENST00000373166 PSMB8P28062 276 aa14.87□□□□□ -0.03
TRAPPC3-204ENST00000373166 ECSCRQ19T08 205 aa14.87□□□□□ -0.03
TRAPPC3-204ENST00000373166 ZNF429Q86V71 674 aa14.87□□□□□ -0.03
TRAPPC3-204ENST00000373166 BEST4Q8NFU0 473 aa14.87□□□□□ -0.03
TRAPPC3-204ENST00000373166 KCTD12Q96CX2 325 aaKnown RBP14.87□□□□□ -0.03
TRAPPC3-204ENST00000373166 C5orf30Q96GV9 206 aa14.87□□□□□ -0.03
TRAPPC3-204ENST00000373166 HARBI1Q96MB7 349 aa14.87□□□□□ -0.03
TRAPPC3-204ENST00000373166 G3V318 75 aa14.86□□□□□ -0.03
TRAPPC3-204ENST00000373166 J3QRK9 145 aa14.86□□□□□ -0.03
TRAPPC3-204ENST00000373166 SLC25A17O43808 307 aa14.86□□□□□ -0.03
TRAPPC3-204ENST00000373166 SLC22A5O76082 557 aa14.86□□□□□ -0.03
TRAPPC3-204ENST00000373166 FRMD6-AS1P0C7T7 363 aa14.86□□□□□ -0.03
TRAPPC3-204ENST00000373166 CBX5P45973 191 aa14.86□□□□□ -0.03
TRAPPC3-204ENST00000373166 VBP1P61758 197 aa14.86□□□□□ -0.03
TRAPPC3-204ENST00000373166 CX3CL1P78423 397 aa14.86□□□□□ -0.03
TRAPPC3-204ENST00000373166 NDPQ00604 133 aa14.86□□□□□ -0.03
TRAPPC3-204ENST00000373166 TMEM65Q6PI78 240 aa14.86□□□□□ -0.03
TRAPPC3-204ENST00000373166 HOGA1Q86XE5 327 aa14.86□□□□□ -0.03
TRAPPC3-204ENST00000373166 ZNF645Q8N7E2 425 aa14.86□□□□□ -0.03
TRAPPC3-204ENST00000373166 BVESQ8NE79 360 aa14.86□□□□□ -0.03
TRAPPC3-204ENST00000373166 OR1N2Q8NGR9 330 aa14.86□□□□□ -0.03
TRAPPC3-204ENST00000373166 UBE2E2Q96LR5 201 aa14.86□□□□□ -0.03
TRAPPC3-204ENST00000373166 CITED4Q96RK1 184 aa14.86□□□□□ -0.03
TRAPPC3-204ENST00000373166 CLCC1Q96S66 551 aa14.86□□□□□ -0.03
TRAPPC3-204ENST00000373166 XRCC3O43542 346 aa14.85□□□□□ -0.03
TRAPPC3-204ENST00000373166 CA2P00918 260 aa14.85□□□□□ -0.03
TRAPPC3-204ENST00000373166 HLA-DQB1P01920 261 aa14.85□□□□□ -0.03
TRAPPC3-204ENST00000373166 LGALS7P47929 136 aa14.85□□□□□ -0.03
TRAPPC3-204ENST00000373166 CRIP2P52943 208 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC3-204ENST00000373166 ZNF616Q08AN1 781 aa14.85□□□□□ -0.03
TRAPPC3-204ENST00000373166 TMEM69Q5SWH9 247 aa14.85□□□□□ -0.03
TRAPPC3-204ENST00000373166 ZFAND6Q6FIF0 208 aa14.85□□□□□ -0.03
TRAPPC3-204ENST00000373166 TCTEX1D1Q8N7M0 179 aa14.85□□□□□ -0.03
TRAPPC3-204ENST00000373166 MRPS26Q9BYN8 205 aaKnown RBP14.85□□□□□ -0.03
TRAPPC3-204ENST00000373166 IFT46Q9NQC8 304 aa14.85□□□□□ -0.03
TRAPPC3-204ENST00000373166 A3GALT2U3KPV4 340 aa14.85□□□□□ -0.03
TRAPPC3-204ENST00000373166 FCN1O00602 326 aa14.84□□□□□ -0.03
TRAPPC3-204ENST00000373166 SHOXO15266 292 aa14.84□□□□□ -0.03
TRAPPC3-204ENST00000373166 PPIFP30405 207 aaKnown RBP14.84□□□□□ -0.03
TRAPPC3-204ENST00000373166 DUTP33316 252 aaKnown RBP14.84□□□□□ -0.03
TRAPPC3-204ENST00000373166 TMEM267Q0VDI3 215 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC3-204ENST00000373166 ZNF562Q6V9R5 426 aa14.84□□□□□ -0.03
TRAPPC3-204ENST00000373166 GVQW1Q8N7I0 195 aa14.84□□□□□ -0.03
TRAPPC3-204ENST00000373166 MYOZ3Q8TDC0 251 aa14.84□□□□□ -0.03
TRAPPC3-204ENST00000373166 FOXA2Q9Y261 457 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC3-204ENST00000373166 VSIG4Q9Y279 399 aa14.84□□□□□ -0.03
TRAPPC3-204ENST00000373166 FBXO7Q9Y3I1 522 aa14.84□□□□□ -0.03
TRAPPC3-204ENST00000373166 A0A1W2PN81 502 aa14.83□□□□□ -0.04
TRAPPC3-204ENST00000373166 I3L521 148 aa14.83□□□□□ -0.04
TRAPPC3-204ENST00000373166 IGLV1-40P01703 118 aa14.83□□□□□ -0.04
TRAPPC3-204ENST00000373166 PTHLHP12272 177 aa14.83□□□□□ -0.04
TRAPPC3-204ENST00000373166 CHRNA7P36544 502 aa14.83□□□□□ -0.04
TRAPPC3-204ENST00000373166 TAS2R20P59543 309 aa14.83□□□□□ -0.04
TRAPPC3-204ENST00000373166 RUNX1Q01196 453 aa14.83□□□□□ -0.04
TRAPPC3-204ENST00000373166 TMEM177Q53S58 311 aa14.83□□□□□ -0.04
TRAPPC3-204ENST00000373166 KCTD9Q7L273 389 aa14.83□□□□□ -0.04
TRAPPC3-204ENST00000373166 PPP1R27Q86WC6 154 aa14.83□□□□□ -0.04
TRAPPC3-204ENST00000373166 MINDY2Q8NBR6 621 aa14.83□□□□□ -0.04
TRAPPC3-204ENST00000373166 DDB2Q92466 427 aa14.83□□□□□ -0.04
TRAPPC3-204ENST00000373166 ARPC1AQ92747 370 aa14.83□□□□□ -0.04
TRAPPC3-204ENST00000373166 TPSG1Q9NRR2 321 aa14.83□□□□□ -0.04
TRAPPC3-204ENST00000373166 RBMX2Q9Y388 322 aaKnown RBP14.83□□□□□ -0.04
TRAPPC3-204ENST00000373166 IGKV1D-13A0A0B4J2D9 117 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 LINC00473A8K010 186 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 OVOL1O14753 267 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 SAP30O75446 220 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 TUSC2O75896 110 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 GABARAPO95166 117 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 CRYZL1O95825 349 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 IGLV2-23P01705 113 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 FCER2P06734 321 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 IGKV1-13P0DP09 117 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 VMA21Q3ZAQ7 101 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 C19orf54Q5BKX5 351 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 ASPHD1Q5U4P2 390 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 UNQ5815/PRO19632Q6UWF5 114 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 ANKRD13BQ86YJ7 626 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 ZNF491Q8N8L2 437 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 GRPEL2Q8TAA5 225 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 ACOT12Q8WYK0 555 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 FAM103A1Q9BTL3 118 aaKnown RBP14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 KLK15Q9H2R5 256 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 GNB4Q9HAV0 340 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 COMMD3Q9UBI1 195 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 MRPS7Q9Y2R9 242 aaKnown RBP14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 PRELID3BQ9Y3B1 194 aa14.82□□□□□ -0.04
TRAPPC3-204ENST00000373166 CSMD3Q7Z407 3707 aa14.81□□□□□ -0.04
TRAPPC3-204ENST00000373166 MEIS3P1A6NDR6 274 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms