RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 OR10G8Q8NGN5 311 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 GPR82Q96P67 336 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 ATG101Q9BSB4 218 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 NAT8Q9UHE5 227 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 HYPMO75409 117 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 OR2A4O95047 310 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 MC5RP33032 325 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 C2orf83Q53S99 150 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 TEPPQ6URK8 271 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 NUDT10Q8NFP7 164 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 NUDT11Q96G61 164 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 OR2A7Q96R45 310 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 PKIBQ9C010 78 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 COX5BP10606 129 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 CALYQ9NYX4 217 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 RIPPLY3P57055 190 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 PCSK4Q6UW60 755 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 FAM168AQ92567 244 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 LINC01587Q99440 93 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 TOLLIPQ9H0E2 274 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 OTOFQ9HC10 1997 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 PDCD11Q14690 1871 aaKnown RBP8.38□□□□□ -1.07
COL4A6-202ENST00000372216 SNURFLB1AK76 121 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 CSRP1P21291 193 aaKnown RBP8.38□□□□□ -1.07
COL4A6-202ENST00000372216 ZXDCQ2QGD7 858 aaPredicted RBP8.38□□□□□ -1.07
COL4A6-202ENST00000372216 RIPPLY2Q5TAB7 128 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 ZNF236Q9UL36 1845 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 FOXI3A8MTJ6 420 aaPredicted RBP8.38□□□□□ -1.07
COL4A6-202ENST00000372216 SIAH2O43255 324 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 ANOS1P23352 680 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 DPPA3Q6W0C5 159 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 DEFB104AQ8WTQ1 72 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 TMEM45BQ96B21 275 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 TRBV5-5A0A0J9YX44 114 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 A0A1W2PP11 408 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 LGALS3P17931 250 aaKnown RBP8.38□□□□□ -1.07
COL4A6-202ENST00000372216 RNASE4P34096 147 aaKnown RBP8.38□□□□□ -1.07
COL4A6-202ENST00000372216 FAM201AQ5SY85 155 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 MRPL13Q9BYD1 178 aaKnown RBP8.38□□□□□ -1.07
COL4A6-202ENST00000372216 IGF2P01344 180 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 TDGF1P13385 188 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 ELOBQ15370 118 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 SLC35B3Q9H1N7 401 aa8.38□□□□□ -1.07
COL4A6-202ENST00000372216 RBFOX3A6NFN3 312 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 UMODP07911 640 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 MMP9P14780 707 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 OR10J1P30954 320 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 FXYD3Q14802 87 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 MALP21145 153 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 SNRPEP62304 92 aaKnown RBP8.37□□□□□ -1.07
COL4A6-202ENST00000372216 SRSF7Q16629 238 aaKnown RBP eCLIP8.37□□□□□ -1.07
COL4A6-202ENST00000372216 ZNF256Q9Y2P7 627 aaPredicted RBP8.37□□□□□ -1.07
COL4A6-202ENST00000372216 C7orf71A4D174 169 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 CKS2P33552 79 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 SNRPD3P62318 126 aaKnown RBP8.37□□□□□ -1.07
COL4A6-202ENST00000372216 TIMM23BQ5SRD1 257 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 ABLIM2Q6H8Q1 611 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 BEND2Q8NDZ0 799 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 PHYHIPLQ96FC7 376 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 LINC00470Q9BZP3 86 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 C7orf69Q9H7B7 122 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 DLL3Q9NYJ7 618 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 ODAMA1E959 279 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 TNFSF10P50591 281 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 DLK1P80370 383 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 BSPH1Q075Z2 132 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 TCTEX1D1Q8N7M0 179 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 VN1R17PQ8TDU5 208 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 HSPB7Q9UBY9 170 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 HSPB8Q9UJY1 196 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 HMSDA8MTL9 139 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 TGFBR3LH3BV60 316 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 EGR4Q05215 589 aa8.37□□□□□ -1.07
COL4A6-202ENST00000372216 TRGV2A0A075B6R0 118 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 FOXH1O75593 365 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 CXorf1O96002 111 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 SAA1P0DJI8 122 aaPredicted RBP8.36□□□□□ -1.07
COL4A6-202ENST00000372216 VDAC2P45880 294 aaPredicted RBP8.36□□□□□ -1.07
COL4A6-202ENST00000372216 MBNL2Q5VZF2 373 aaKnown RBP8.36□□□□□ -1.07
COL4A6-202ENST00000372216 EEF1AKMT3Q96AZ1 226 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 G6PC2Q9NQR9 355 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 KCNK7Q9Y2U2 307 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 DUXBA0A1W2PPF3 345 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 TMEM177Q53S58 311 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 FAM209AQ5JX71 171 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 C10orf128Q5T292 105 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 CALHM1Q8IU99 346 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 GEMIN7Q9H840 131 aaKnown RBP8.36□□□□□ -1.07
COL4A6-202ENST00000372216 KBTBD11O94819 623 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 MOSP00540 346 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 LIPFP07098 398 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 ZNF708P17019 499 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 LHX2P50458 406 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 SMAGPQ0VAQ4 97 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 WDR73Q6P4I2 378 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 SSBP3Q9BWW4 388 aaPredicted RBP8.36□□□□□ -1.07
COL4A6-202ENST00000372216 TRAV20A0A0B4J274 112 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 LDLRAD4O15165 306 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 CDS2O95674 445 aa8.36□□□□□ -1.07
COL4A6-202ENST00000372216 CA2P00918 260 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms