RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PSMB11A5LHX3 300 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 VAX1Q5SQQ9 334 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 OR1B1Q8NGR6 318 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 RALGAPA2Q2PPJ7 1873 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 RPL36A-HNRNPH2H7BZ11 118 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 TPTE2P1Q5T6R2 138 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 PRSS27Q9BQR3 290 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 CHST5Q9GZS9 411 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 COA4Q9NYJ1 87 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 SCN3AQ9NY46 2000 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 ZNF815PA8K554 130 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 BCL2P10415 239 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 CSN3P07498 182 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 NANOS3P60323 173 aaKnown RBP11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 MYOZ3Q8TDC0 251 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 MRPL37Q9BZE1 423 aaKnown RBP11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 SS18L2Q9UHA2 77 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 HLA-DQB1P01920 261 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 SPINK8P0C7L1 97 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 MMP9P14780 707 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 FSTP19883 344 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 KIR3DL2P43630 455 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 LYZP61626 148 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 RNF115Q9Y4L5 304 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 MRPL16Q9NX20 251 aaKnown RBP11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 INSIG2Q9Y5U4 225 aa11.48□□□□□ -0.57
RAPGEF1-201ENST00000372189 FAM157CP0CG43 387 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 PPP1CCP36873 323 aaKnown RBP11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 FAM219AQ8IW50 185 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 DNASE2O00115 360 aaPredicted RBP11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 COL10A1Q03692 680 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 ZNF260Q3ZCT1 412 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 ZPLD1Q8TCW7 415 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 MRGPRFQ96AM1 343 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 C5orf17Q8NAS9 161 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 OR1L1Q8NH94 360 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 RAXQ9Y2V3 346 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 FUT5Q11128 374 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 CYB561D1Q8N8Q1 229 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 ST6GALNAC3Q8NDV1 305 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 ABHD17AQ96GS6 310 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 C5orf30Q96GV9 206 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 SRXN1Q9BYN0 137 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 G6PC2Q9NQR9 355 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 OR5AC2Q9NZP5 309 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 OR51B2Q9Y5P1 312 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 TRACP01848 142 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 SERF2P84101 59 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 DOLPP1Q86YN1 238 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 NDUFAF3Q9BU61 184 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 KLHDC2Q9Y2U9 406 aa11.47□□□□□ -0.57
RAPGEF1-201ENST00000372189 ZNF324BQ6AW86 544 aaPredicted RBP11.46□□□□□ -0.57
RAPGEF1-201ENST00000372189 CD200R1LQ6Q8B3 271 aa11.46□□□□□ -0.57
RAPGEF1-201ENST00000372189 WDFY1Q8IWB7 410 aa11.46□□□□□ -0.57
RAPGEF1-201ENST00000372189 SSMEM1Q8WWF3 244 aa11.46□□□□□ -0.57
RAPGEF1-201ENST00000372189 OR2V2Q96R30 315 aa11.46□□□□□ -0.57
RAPGEF1-201ENST00000372189 IFNL4K9M1U5 179 aa11.46□□□□□ -0.57
RAPGEF1-201ENST00000372189 PRDX2P32119 198 aa11.46□□□□□ -0.57
RAPGEF1-201ENST00000372189 PIGYQ3MUY2 71 aa11.46□□□□□ -0.57
RAPGEF1-201ENST00000372189 ACSF3Q4G176 576 aaPredicted RBP11.46□□□□□ -0.57
RAPGEF1-201ENST00000372189 CTHRC1Q96CG8 243 aa11.46□□□□□ -0.57
RAPGEF1-201ENST00000372189 SLC25A33Q9BSK2 321 aa11.46□□□□□ -0.57
RAPGEF1-201ENST00000372189 TMEM204Q9BSN7 226 aa11.46□□□□□ -0.57
RAPGEF1-201ENST00000372189 FOXD3Q9UJU5 478 aaPredicted RBP11.46□□□□□ -0.57
RAPGEF1-201ENST00000372189 HSPB1P04792 205 aaKnown RBP11.46□□□□□ -0.57
RAPGEF1-201ENST00000372189 MIEN1Q9BRT3 115 aa11.46□□□□□ -0.57
RAPGEF1-201ENST00000372189 C1QCP02747 245 aa11.46□□□□□ -0.58
RAPGEF1-201ENST00000372189 TWIST1Q15672 202 aa11.46□□□□□ -0.58
RAPGEF1-201ENST00000372189 CCDC144NLQ6NUI1 221 aa11.46□□□□□ -0.58
RAPGEF1-201ENST00000372189 RASL11AQ6T310 242 aa11.46□□□□□ -0.58
RAPGEF1-201ENST00000372189 SHISA5Q8N114 240 aa11.46□□□□□ -0.58
RAPGEF1-201ENST00000372189 SMIM20Q8N5G0 67 aa11.46□□□□□ -0.58
RAPGEF1-201ENST00000372189 TRBV5-5A0A0J9YX44 114 aa11.46□□□□□ -0.58
RAPGEF1-201ENST00000372189 PSG2P11465 335 aa11.46□□□□□ -0.58
RAPGEF1-201ENST00000372189 SLC25A47Q6Q0C1 308 aa11.46□□□□□ -0.58
RAPGEF1-201ENST00000372189 PERPQ96FX8 193 aa11.46□□□□□ -0.58
RAPGEF1-201ENST00000372189 CCL19Q99731 98 aa11.46□□□□□ -0.58
RAPGEF1-201ENST00000372189 CA11O75493 328 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 LIMS1P48059 325 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 NUTF2P61970 127 aaKnown RBP11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 RPL31P62899 125 aaKnown RBP11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 SIGLEC12Q96PQ1 595 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 MAP1LC3AQ9H492 121 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 PRNDQ9UKY0 176 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 PATJQ8NI35 1801 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 MS4A18H0YCH9 400 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 MS4A18Q3C1V0 323 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 CEACAM21Q3KPI0 293 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 GCSAMLQ5JQS6 135 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 TET1Q8NFU7 2136 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 A1L4Q6 167 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 F5H697 171 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 IGKV3-11P04433 115 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 COL8A1P27658 744 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 A0A0U1RQV5 110 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 MPTX1A8MV57 137 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 ZNF788Q6ZQV5 615 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 EEF1AKMT3Q96AZ1 226 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 SPANXDQ9BXN6 97 aa11.45□□□□□ -0.58
RAPGEF1-201ENST00000372189 ZNF658BQ4V348 819 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms