RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 FHL5Q5TD97 284 aa18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 C5orf66Q9H5L9 145 aa18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 THY1P04216 161 aa18.96■□□□□ 0.63
TM9SF3-201ENST00000371142 AMY1AP04745 511 aa18.96■□□□□ 0.63
TM9SF3-201ENST00000371142 HSPE1P61604 102 aaKnown RBP18.96■□□□□ 0.63
TM9SF3-201ENST00000371142 LOC107984156A0A0G2JMH3 177 aa18.96■□□□□ 0.63
TM9SF3-201ENST00000371142 ARL17AQ8IVW1 177 aa18.96■□□□□ 0.63
TM9SF3-201ENST00000371142 QTRT1Q9BXR0 403 aaKnown RBP18.96■□□□□ 0.63
TM9SF3-201ENST00000371142 TMEM74BQ9NUR3 256 aa18.96■□□□□ 0.63
TM9SF3-201ENST00000371142 MAP1BP46821 2468 aaKnown RBP18.96■□□□□ 0.63
TM9SF3-201ENST00000371142 MYO16Q9Y6X6 1858 aa18.96■□□□□ 0.63
TM9SF3-201ENST00000371142 HINT1P49773 126 aaPredicted RBP18.96■□□□□ 0.63
TM9SF3-201ENST00000371142 PEAR1Q5VY43 1037 aaPredicted RBP18.96■□□□□ 0.63
TM9SF3-201ENST00000371142 OR4A47Q6IF82 309 aa18.96■□□□□ 0.63
TM9SF3-201ENST00000371142 NDUFA2O43678 99 aa18.96■□□□□ 0.63
TM9SF3-201ENST00000371142 CRYBA2P53672 197 aa18.96■□□□□ 0.63
TM9SF3-201ENST00000371142 SRSF12Q8WXF0 261 aaKnown RBP18.96■□□□□ 0.63
TM9SF3-201ENST00000371142 PSG9Q00887 426 aa18.96■□□□□ 0.62
TM9SF3-201ENST00000371142 TMEM45BQ96B21 275 aa18.96■□□□□ 0.62
TM9SF3-201ENST00000371142 Q96M66 194 aa18.95■□□□□ 0.62
TM9SF3-201ENST00000371142 OR51M1Q9H341 326 aa18.95■□□□□ 0.62
TM9SF3-201ENST00000371142 FOXJ2Q9P0K8 574 aa18.95■□□□□ 0.62
TM9SF3-201ENST00000371142 ATP5J2P56134 94 aa18.95■□□□□ 0.62
TM9SF3-201ENST00000371142 PLAURQ03405 335 aa18.95■□□□□ 0.62
TM9SF3-201ENST00000371142 DUX5Q96PT3 197 aa18.95■□□□□ 0.62
TM9SF3-201ENST00000371142 PRR19A6NJB7 356 aa18.95■□□□□ 0.62
TM9SF3-201ENST00000371142 CRYBB3P26998 211 aa18.95■□□□□ 0.62
TM9SF3-201ENST00000371142 TAS2R60P59551 318 aa18.95■□□□□ 0.62
TM9SF3-201ENST00000371142 LOC101059948A0A1B0GTJ6 334 aa18.95■□□□□ 0.62
TM9SF3-201ENST00000371142 MT-ND6P03923 174 aa18.95■□□□□ 0.62
TM9SF3-201ENST00000371142 C19orf48Q6RUI8 117 aa18.95■□□□□ 0.62
TM9SF3-201ENST00000371142 PUSL1Q8N0Z8 303 aaKnown RBP18.95■□□□□ 0.62
TM9SF3-201ENST00000371142 PNKDQ8N490 385 aa18.95■□□□□ 0.62
TM9SF3-201ENST00000371142 JPT1Q9UK76 154 aa18.95■□□□□ 0.62
TM9SF3-201ENST00000371142 ZNF256Q9Y2P7 627 aaPredicted RBP18.95■□□□□ 0.62
TM9SF3-201ENST00000371142 RSPO4Q2I0M5 234 aaPredicted RBP18.94■□□□□ 0.62
TM9SF3-201ENST00000371142 FAM106AQ4KMX7 169 aa18.94■□□□□ 0.62
TM9SF3-201ENST00000371142 IGHV3-35A0A0C4DH35 117 aa18.94■□□□□ 0.62
TM9SF3-201ENST00000371142 IFNL4K9M1U5 179 aa18.94■□□□□ 0.62
TM9SF3-201ENST00000371142 CFHR5Q9BXR6 569 aa18.94■□□□□ 0.62
TM9SF3-201ENST00000371142 KLK15Q9H2R5 256 aa18.94■□□□□ 0.62
TM9SF3-201ENST00000371142 IGHV1-69-2A0A0G2JMI3 117 aa18.94■□□□□ 0.62
TM9SF3-201ENST00000371142 TIAF1O95411 115 aa18.94■□□□□ 0.62
TM9SF3-201ENST00000371142 MAP1LC3AQ9H492 121 aa18.94■□□□□ 0.62
TM9SF3-201ENST00000371142 RAXQ9Y2V3 346 aa18.94■□□□□ 0.62
TM9SF3-201ENST00000371142 LY75O60449 1722 aa18.94■□□□□ 0.62
TM9SF3-201ENST00000371142 IGKV3OR2-268A0A0C4DH90 116 aa18.94■□□□□ 0.62
TM9SF3-201ENST00000371142 C8orf88P0DMB2 117 aa18.94■□□□□ 0.62
TM9SF3-201ENST00000371142 LAMTOR1Q6IAA8 161 aa18.94■□□□□ 0.62
TM9SF3-201ENST00000371142 RAX2Q96IS3 184 aa18.94■□□□□ 0.62
TM9SF3-201ENST00000371142 SMIM10L1P0DMW3 83 aa18.93■□□□□ 0.62
TM9SF3-201ENST00000371142 SMIM10Q96HG1 83 aa18.93■□□□□ 0.62
TM9SF3-201ENST00000371142 GPX1P07203 203 aa18.93■□□□□ 0.62
TM9SF3-201ENST00000371142 LINC01560Q8TB33 94 aa18.93■□□□□ 0.62
TM9SF3-201ENST00000371142 DLX6P56179 175 aa18.93■□□□□ 0.62
TM9SF3-201ENST00000371142 SAXO1Q8IYX7 474 aa18.93■□□□□ 0.62
TM9SF3-201ENST00000371142 OR9G1Q8NH87 305 aa18.93■□□□□ 0.62
TM9SF3-201ENST00000371142 FAM74A4Q5TZK3 123 aa18.93■□□□□ 0.62
TM9SF3-201ENST00000371142 OR1P1Q8NH06 330 aa18.93■□□□□ 0.62
TM9SF3-201ENST00000371142 ZNFX1Q9P2E3 1918 aaKnown RBP18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 TMEM238LA0A1B0GVL6 79 aa18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 A6NJY4 79 aa18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 ZCCHC14Q8WYQ9 949 aaKnown RBP18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 TRAV30A0A087WSZ9 112 aa18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 GDF9O60383 454 aa18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 LEPROTL1O95214 131 aa18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 IGKV3-20P01619 116 aa18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 NAT1P18440 290 aa18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 C21orf62-AS1Q17RA5 79 aa18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 LHFPL5Q8TAF8 219 aa18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 CCL19Q99731 98 aa18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 CLEC7AQ9BXN2 247 aa18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 OR4C13Q8NGP0 309 aa18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 AQP10Q96PS8 301 aa18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 HOXB1P14653 301 aaPredicted RBP18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 COL5A1-AS1Q5SY13 56 aa18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 TMEM54Q969K7 222 aa18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 TCF19Q9Y242 345 aa18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 HLA-DQA1P01909 254 aa18.92■□□□□ 0.62
TM9SF3-201ENST00000371142 GCGP01275 180 aa18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 SFXN3Q9BWM7 321 aa18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 IGHV3-23P01764 117 aa18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 TXNDC17Q9BRA2 123 aa18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 DCTN5Q9BTE1 182 aa18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 MARF1Q9Y4F3 1742 aaKnown RBP18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 FAM90A26D6RGX4 464 aa18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 H2BFSP57053 126 aa18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 KIAA1644Q3SXP7 199 aa18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 RND3P61587 244 aa18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 TMEM187Q14656 261 aa18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 RIPPLY2Q5TAB7 128 aa18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 OR51G1Q8NGK1 321 aa18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 PRDM6Q9NQX0 595 aa18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 MOSP00540 346 aa18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 MBNL2Q5VZF2 373 aaKnown RBP18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 GPR82Q96P67 336 aa18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 COL25A1Q9BXS0 654 aaPredicted RBP18.91■□□□□ 0.62
TM9SF3-201ENST00000371142 PTGDSP41222 190 aa18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 ZNF385CQ66K41 422 aaPredicted RBP18.9■□□□□ 0.62
TM9SF3-201ENST00000371142 HIST1H4GQ99525 98 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms