RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 CSTL1Q9H114 145 aa10.92□□□□□ -0.66
GPC4-201ENST00000370828 K7N7A8 449 aa10.92□□□□□ -0.66
GPC4-201ENST00000370828 ZG16O60844 167 aa10.92□□□□□ -0.66
GPC4-201ENST00000370828 S100A4P26447 101 aaKnown RBP10.92□□□□□ -0.66
GPC4-201ENST00000370828 RSPO4Q2I0M5 234 aaPredicted RBP10.92□□□□□ -0.66
GPC4-201ENST00000370828 FHL5Q5TD97 284 aa10.92□□□□□ -0.66
GPC4-201ENST00000370828 LOXL4Q96JB6 756 aa10.92□□□□□ -0.66
GPC4-201ENST00000370828 RNF122Q9H9V4 155 aa10.92□□□□□ -0.66
GPC4-201ENST00000370828 SEMA5BQ9P283 1151 aa10.92□□□□□ -0.66
GPC4-201ENST00000370828 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.91□□□□□ -0.66
GPC4-201ENST00000370828 S1PR2O95136 353 aa10.91□□□□□ -0.66
GPC4-201ENST00000370828 FOXA3P55318 350 aaPredicted RBP10.91□□□□□ -0.66
GPC4-201ENST00000370828 FNDC4Q9H6D8 234 aaPredicted RBP10.91□□□□□ -0.66
GPC4-201ENST00000370828 LMO7DNF2Z398 122 aa10.91□□□□□ -0.66
GPC4-201ENST00000370828 SPRY3O43610 288 aa10.91□□□□□ -0.66
GPC4-201ENST00000370828 MT-CO3P00414 261 aa10.91□□□□□ -0.66
GPC4-201ENST00000370828 Q8NFD4 153 aa10.91□□□□□ -0.66
GPC4-201ENST00000370828 OR1N2Q8NGR9 330 aa10.91□□□□□ -0.66
GPC4-201ENST00000370828 NRN1Q9NPD7 142 aa10.91□□□□□ -0.66
GPC4-201ENST00000370828 A0A0G2JMM0 328 aa10.91□□□□□ -0.66
GPC4-201ENST00000370828 A0A1W2PPB8 328 aa10.91□□□□□ -0.66
GPC4-201ENST00000370828 A1L4Q6 167 aa10.91□□□□□ -0.66
GPC4-201ENST00000370828 KIR3DP1A8MWS1 328 aa10.91□□□□□ -0.66
GPC4-201ENST00000370828 SPINK8P0C7L1 97 aa10.91□□□□□ -0.66
GPC4-201ENST00000370828 GABRG2P18507 467 aa10.91□□□□□ -0.66
GPC4-201ENST00000370828 ZP4Q12836 540 aa10.91□□□□□ -0.66
GPC4-201ENST00000370828 VMA21Q3ZAQ7 101 aa10.91□□□□□ -0.66
GPC4-201ENST00000370828 KRTCAP3Q53RY4 240 aa10.91□□□□□ -0.66
GPC4-201ENST00000370828 TM4SF19Q96DZ7 209 aa10.91□□□□□ -0.66
GPC4-201ENST00000370828 A8MWL6 223 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 MS4A18H0YCH9 400 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 TYMSP04818 313 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 PSG1P11464 419 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 MRPS11P82912 194 aaKnown RBP10.9□□□□□ -0.66
GPC4-201ENST00000370828 MS4A18Q3C1V0 323 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 C10orf113Q5VZT2 155 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 LRRC29Q8WV35 223 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 HARBI1Q96MB7 349 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 TMEM70Q9BUB7 260 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 SNHG12Q9BXW3 62 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 ATP23Q9Y6H3 246 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 C3orf80F5H4A9 247 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 IL4P05112 153 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 COL9A1P20849 921 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 KLRB1Q12918 225 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 TMEM177Q53S58 311 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 SMIM20Q8N5G0 67 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 TMEM45BQ96B21 275 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 GUCD1Q96NT3 240 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 RPP25Q9BUL9 199 aaKnown RBP10.9□□□□□ -0.66
GPC4-201ENST00000370828 KLF2Q9Y5W3 355 aaPredicted RBP10.9□□□□□ -0.66
GPC4-201ENST00000370828 HS3ST3B1Q9Y662 390 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 MARF1Q9Y4F3 1742 aaKnown RBP10.9□□□□□ -0.66
GPC4-201ENST00000370828 SNRNP200O75643 2136 aaKnown RBP10.9□□□□□ -0.66
GPC4-201ENST00000370828 C9JQL5 133 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 ADMP35318 185 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 RAC3P60763 192 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 UNQ5815/PRO19632Q6UWF5 114 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 TPRX1Q8N7U7 411 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 RASL10BQ96S79 203 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 PRDM13Q9H4Q3 707 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 UFC1Q9Y3C8 167 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 COX11Q9Y6N1 276 aa10.9□□□□□ -0.66
GPC4-201ENST00000370828 ASXL3Q9C0F0 2248 aa10.9□□□□□ -0.67
GPC4-201ENST00000370828 COX6CP09669 75 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 CD40P25942 277 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 SEC11AP67812 179 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 PGLYRP4Q96LB8 373 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 SPANXCQ9NY87 97 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 ATP5G3P48201 142 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 RPL31P62899 125 aaKnown RBP10.89□□□□□ -0.67
GPC4-201ENST00000370828 ASPHD2Q6ICH7 369 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 ZBTB34Q8NCN2 500 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 ZNF721Q8TF20 911 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 PAXXQ9BUH6 204 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 SELENOKQ9Y6D0 94 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 TRBV9A0A0B4J1U6 114 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 J3QT63 122 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 M0R1B8 84 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 SPINT1O43278 529 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 PLAUP00749 431 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 KIR2DS2P43631 304 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 TMEM95Q3KNT9 176 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 TMEM178AQ8NBL3 297 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 KCNS1Q96KK3 526 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 DIRC2Q96SL1 478 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 CD33P20138 364 aa10.89□□□□□ -0.67
GPC4-201ENST00000370828 TP53BP1Q12888 1972 aaPredicted RBP10.89□□□□□ -0.67
GPC4-201ENST00000370828 MPDU1O75352 247 aa10.88□□□□□ -0.67
GPC4-201ENST00000370828 MNX1P50219 401 aaPredicted RBP10.88□□□□□ -0.67
GPC4-201ENST00000370828 GAGE5Q13069 117 aa10.88□□□□□ -0.67
GPC4-201ENST00000370828 GAGE6Q13070 117 aa10.88□□□□□ -0.67
GPC4-201ENST00000370828 SPSB4Q96A44 273 aa10.88□□□□□ -0.67
GPC4-201ENST00000370828 ZNF785A8K8V0 405 aa10.88□□□□□ -0.67
GPC4-201ENST00000370828 APOMO95445 188 aa10.88□□□□□ -0.67
GPC4-201ENST00000370828 C1QTNF9P0C862 333 aa10.88□□□□□ -0.67
GPC4-201ENST00000370828 FGF12P61328 243 aa10.88□□□□□ -0.67
GPC4-201ENST00000370828 CENPWQ5EE01 88 aa10.88□□□□□ -0.67
GPC4-201ENST00000370828 IL36BQ9NZH7 164 aa10.88□□□□□ -0.67
GPC4-201ENST00000370828 RFNGQ9Y644 331 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms