RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 KDF1Q8NAX2 398 aaPredicted RBP4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 SPRY4Q9C004 299 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 RBKSQ9H477 322 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 SLC25A22Q9H936 323 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 C1RLQ9NZP8 487 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 METTL1Q9UBP6 276 aaKnown RBP4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 SLC25A15Q9Y619 301 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 IGKV1D-8A0A087WSZ0 117 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 IGHV1-69-2A0A0G2JMI3 117 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 A0A1W2PPQ1 181 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 C17orf100A8MU93 164 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 B4DEV8 164 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 H3BQ15 152 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 IGKV3-15P01624 115 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 BRS3P32247 399 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 TMEM241Q24JQ0 296 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 TEPPQ6URK8 271 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 MUC15Q8N387 334 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 SLC24A4Q8NFF2 622 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 PLPPR1Q8TBJ4 325 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 TMEM18Q96B42 140 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 TMEM186Q96B77 213 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 C18orf12Q96KH6 178 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 C1orf147Q96MC9 270 aaPredicted RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 CHRDL1Q9BU40 450 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 NPVFQ9HCQ7 196 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 TMEM167BQ9NRX6 74 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 OR51B2Q9Y5P1 312 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 HEATR1Q9H583 2144 aaKnown RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 CLN5O75503 358 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 DANCRP0C864 163 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 CD1BP29016 333 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 GPR6P46095 362 aaPredicted RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 BSPH1Q075Z2 132 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 SRSF4Q08170 494 aaKnown RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 TBR1Q16650 682 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 ZNRF1Q8ND25 227 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 OR9G1Q8NH87 305 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 PACRGQ96M98 296 aaPredicted RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 TMEM106BQ9NUM4 274 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 COA4Q9NYJ1 87 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 ANAPC10Q9UM13 185 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 ELOA3CA0A087WX78 387 aaPredicted RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 KBTBD11-OT1A0A1B0GTJ5 212 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 A0A1W2PPE3 182 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 G3V3Q6 166 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 S1PR2O95136 353 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 MGST1P10620 155 aaKnown RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 CSN1S1P47710 185 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 HSPE1P61604 102 aaKnown RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 DLK1P80370 383 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 SLC35E3Q7Z769 313 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 OR13A1Q8NGR1 328 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 ZCCHC14Q8WYQ9 949 aaKnown RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 RNASE6Q93091 150 aaKnown RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 GPHA2Q96T91 129 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 PSMG3Q9BT73 122 aaPredicted RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 RNF126Q9BV68 326 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 GGACTQ9BVM4 153 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 TECRQ9NZ01 308 aaKnown RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 WASHC3Q9Y3C0 194 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 DMRT1Q9Y5R6 373 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 CEP192Q8TEP8 1941 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 NCBP2LA6PVI3 153 aaKnown RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 SRRM5B3KS81 715 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 YPEL1O60688 119 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 CNN1P51911 297 aaKnown RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 UBE2G2P60604 165 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 SRSF6Q13247 344 aaKnown RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 HABP2Q14520 560 aaPredicted RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 TNXAQ16473 311 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 RSPO1Q2MKA7 263 aaPredicted RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 RNF144BQ7Z419 303 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 TMEM171Q8WVE6 324 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 TMEM37Q8WXS4 190 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 TAF15Q92804 592 aaKnown RBP eCLIP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 RNF166Q96A37 237 aaPredicted RBP4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 MISP3Q96FF7 219 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 DOCK7Q96N67 2140 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 YPEL2Q96QA6 119 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 TXNDC17Q9BRA2 123 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 GINS3Q9BRX5 216 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 UBTD1Q9HAC8 227 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 TMEM140Q9NV12 185 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 RPH3ALQ9UNE2 315 aa4.48□□□□□ -1.69
SMNDC1-202ENST00000369603 IGKV1D-13A0A0B4J2D9 117 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 TCAPO15273 167 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 OPN1MWP04001 364 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 OPN1MW2P0DN77 364 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 OPN1MW3P0DN78 364 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 IGKV1-13P0DP09 117 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 USF1P22415 310 aaPredicted RBP4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 PKIAP61925 76 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 SUPT4H1P63272 117 aaKnown RBP4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 C3orf36Q3SXR2 165 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 ZNF324BQ6AW86 544 aaPredicted RBP4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 WDFY1Q8IWB7 410 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 MRPL37Q9BZE1 423 aaKnown RBP4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 DOK5Q9P104 306 aa4.47□□□□□ -1.69
SMNDC1-202ENST00000369603 NAT8Q9UHE5 227 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms