RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 LIN7CQ9NUP9 197 aaKnown RBP10.34□□□□□ -0.75
PHGDH-201ENST00000369407 RNF114Q9Y508 228 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 ASPMQ8IZT6 3477 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 ODAMA1E959 279 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 MRPL33O75394 65 aaKnown RBP10.34□□□□□ -0.75
PHGDH-201ENST00000369407 S1PR2O95136 353 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 WNT2P09544 360 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 CDC34P49427 236 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-201ENST00000369407 LYG1Q8N1E2 194 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 OR10P1Q8NGE3 313 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 PLPPR2Q96GM1 343 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 BTF3L4Q96K17 158 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 IMMP1LQ96LU5 166 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 VAMP8Q9BV40 100 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 TMEM147Q9BVK8 224 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 TMEM106BQ9NUM4 274 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 GJE1A6NN92 205 aa10.33□□□□□ -0.76
PHGDH-201ENST00000369407 CCL4P13236 92 aa10.33□□□□□ -0.76
PHGDH-201ENST00000369407 LINC00310P59036 64 aa10.33□□□□□ -0.76
PHGDH-201ENST00000369407 SRSF7Q16629 238 aaKnown RBP eCLIP10.33□□□□□ -0.76
PHGDH-201ENST00000369407 ELOVL5Q9NYP7 299 aa10.33□□□□□ -0.76
PHGDH-201ENST00000369407 ZFP30Q9Y2G7 519 aa10.33□□□□□ -0.76
PHGDH-201ENST00000369407 KNTC1P50748 2209 aa10.33□□□□□ -0.76
PHGDH-201ENST00000369407 DOCK10Q96BY6 2186 aa10.33□□□□□ -0.76
PHGDH-201ENST00000369407 PINLYPA6NC86 204 aa10.33□□□□□ -0.76
PHGDH-201ENST00000369407 COLCA1Q6ZS62 124 aa10.33□□□□□ -0.76
PHGDH-201ENST00000369407 STPG4Q8N801 248 aa10.33□□□□□ -0.76
PHGDH-201ENST00000369407 OR2D2Q9H210 308 aa10.33□□□□□ -0.76
PHGDH-201ENST00000369407 RYDENQ9NUL5 291 aaKnown RBP10.33□□□□□ -0.76
PHGDH-201ENST00000369407 DNAJC13O75165 2243 aa10.33□□□□□ -0.76
PHGDH-201ENST00000369407 MLNRO43193 412 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 IL6RP08887 468 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-201ENST00000369407 GDF1P27539 372 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 SOX8P57073 446 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 VAMP3Q15836 100 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 ACSF3Q4G176 576 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-201ENST00000369407 C5orf30Q96GV9 206 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 SLC35E1Q96K37 410 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 DEPPQ9NTK1 212 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 C17orf98A8MV24 154 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 P04436 131 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 SERPINA7P05543 415 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 HLA-DRB5Q30154 266 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 LDLRAD2Q5SZI1 272 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 TPTE2P1Q5T6R2 138 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 TMEM144Q7Z5S9 345 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 TUSC5Q8IXB3 177 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 CADM4Q8NFZ8 388 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 OR52L2PQ8NGH6 319 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 SFRP2Q96HF1 295 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 ZFHX4Q86UP3 3567 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 SCO2A0A1W2PP80 73 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 F6UZH7 168 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 OR2H2O95918 312 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 KITLGP21583 273 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 BAGE3Q86Y29 109 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 BAGE2Q86Y30 109 aa10.32□□□□□ -0.76
PHGDH-201ENST00000369407 ZDBF2Q9HCK1 2354 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 KIAA1549Q9HCM3 1950 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 MDFIC2A0A1B0GVS7 189 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 PMS2P5A8MQ11 134 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-201ENST00000369407 KLF7O75840 302 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-201ENST00000369407 CELA3AP09093 270 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 RIPPLY3P57055 190 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 KRTDAPP60985 99 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 SLC35B1P78383 322 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 LCN2P80188 198 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 ZNF90Q03938 601 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 ATP6V1FQ16864 119 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 SMIM15Q7Z3B0 74 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 SAMD10Q9BYL1 202 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 TIMM9Q9Y5J7 89 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 IGHV3-43A0A0B4J1X8 118 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 LRRC30A6NM36 301 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 ANKRD30BLA7E2S9 258 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 A8MXE2 369 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 DEFB108AA8MXU0 73 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 VENTXO95231 258 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 CRYABP02511 175 aaKnown RBP10.31□□□□□ -0.76
PHGDH-201ENST00000369407 IGHV3-43DP0DP04 118 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 CACNA1EQ15878 2313 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 LTC4SQ16873 150 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 KIAA1644Q3SXP7 199 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 SAXO1Q8IYX7 474 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 TPRX1Q8N7U7 411 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 OCC1Q8TAD7 63 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 MIEN1Q9BRT3 115 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 HSPB7Q9UBY9 170 aa10.31□□□□□ -0.76
PHGDH-201ENST00000369407 ITGB1BP1O14713 200 aa10.3□□□□□ -0.76
PHGDH-201ENST00000369407 GOSR1O95249 250 aa10.3□□□□□ -0.76
PHGDH-201ENST00000369407 SRD5A2P31213 254 aa10.3□□□□□ -0.76
PHGDH-201ENST00000369407 OTX2P32243 289 aa10.3□□□□□ -0.76
PHGDH-201ENST00000369407 IER3P46695 156 aa10.3□□□□□ -0.76
PHGDH-201ENST00000369407 C3AR1Q16581 482 aa10.3□□□□□ -0.76
PHGDH-201ENST00000369407 Q6P435 159 aa10.3□□□□□ -0.76
PHGDH-201ENST00000369407 ATOH7Q8N100 152 aa10.3□□□□□ -0.76
PHGDH-201ENST00000369407 IFI44Q8TCB0 444 aa10.3□□□□□ -0.76
PHGDH-201ENST00000369407 STRADBQ9C0K7 418 aa10.3□□□□□ -0.76
PHGDH-201ENST00000369407 SH2D2AQ9NP31 389 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms